Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g00770.t01
CDS Infomation

cds chromosome:12X:12:5575071:5578295:1 gene:VIT_12s0059g00770 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAGATTACAGGGCTGTGAGTTGGGTGTTGCTAGTGTTCGTCTCAGTGACTTGCATT
AGTGGGGAGGACCCTTACAGGTTCTTCACATGGAATGTCACCTACGGTGATATCTACCCT
CTTGGAGTGAAGCAACAGGGGATACTGATAAATGGGCAGTTTCCAGGGCCACCAATCGAA
TCTGTGACTAATGATAACTTGATTGTCAGTGTTTACAATAGCTTGGATGAGCCTTTCCTC
CTCTCATGGAATGGTGTGCAGCAGAGGAGGAACTCATGGCAGGATGGAGTTTATGGCACC
AACTGTCCGATTCCACCGGGGCAGAACTTCACCTATGTTCTGCAAGTGAAGGATCAAATT
GGTAGCTACTTCTACTTTCCTTCTCTTGCCTTCCACAAGGCTGCTGGAGGGTATGGGGGC
ATTAAAATCTCAAGCCGTCCTTTAATTCCAGTACCTTTTCCTCCTCCTGCTGGCGATTAC
ACTATACTAGCTGGGGACTGGTACAAGAAAAATCACACTGATTTGAAAGCGATTTTGGAT
GGTGGAAGTGATCTTCCTTTCCCTGATGGACTCCTTATCAATGGTCGGGGATCAAATGGA
TACACATTTACTGTTGATCAAGGTAAAACTTACAGGTTCCGGATATCTAATGTGGGGATT
GCAACTTCCCTCAATTTTAGAATACAGGGCCACAAGATGCTGCTGGTGGAGGTGGAGGGG
ACTCATGCACTGCAGAACACATATTCTTCCCTTGACATTCACCTTGGCCAGTCATACTCT
GTATTGGTTACAGCTGACCAACCGGCACAGGATTATTACATTGTGGTCTCCACACGTTTC
ACCTCCCAAGTGCTCACCACAACCTCCACTCTTCATTACAGTAACTCAGCAGGAAGAGTG
TCTGGTCCTCCTCCTGGCGGTCCGACTATTCAGACTGATTGGTCTCTTAACCAGGCCCGA
TCTATCAGACGGAATCTAACAGCAAGTGGGCCGAGACCTAATCCTCAAGGATCTTACCAT
TATGGATTGATCAACACTACCCATACAATCAGACTTGCAAACTCTGCTCCAGTTATCAAT
GGAAAGCAGAGGTATGCAGTTAACAGTGTGTCCTTCATCCCAGCAGATACACCACTTAAG
CTTGCCGACTACTTCAAGATCTCAGGGGTCTTCAACCTTGGAAGCATCCCAGATAACCCC
ACTGGTGGTGGTGGTTACCTCCAGACTTCTGTCATGGCTGCTGATTTCCGAGGCTTTGCT
GAAGTTGTGTTTGAGAATCCTGAAGACACCTTGCAGTCATGGCACATTGATGGCCATAAT
TTCTTTGTTGTGGGGATGGATGGAGGGCAGTGGACACCTTCCAGTAGACTAAGTTACAAT
TTGAGAGACACAATTTCTCGTTGTACTGTTCAGGTGTATCCCAAGTCATGGACTGCCCTT
TACATGCCTTTGGACAATGTGGGTATGTGGAACGTAAGATCAGAGAACTGGGCTCGCCAA
TACTTGGGTCAGCAATTCTATCTTCGTGTCTATTCTCCTGCAAACTCATGGAGAGATGAA
TATCCAATCCCTAAGAACGCTCTTCTCTGTGGACGAGCATCAGGCCGCAAGACCCGGCCT
CTATAA

Peptide Sequence

PEP ID

VIT_12s0059g00770.t01
PEP Infomation

pep chromosome:12X:12:5575071:5578295:1 gene:VIT_12s0059g00770 transcript:VIT_12s0059g00770.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGDYRAVSWVLLVFVSVTCISGEDPYRFFTWNVTYGDIYPLGVKQQGILINGQFPGPPIE
SVTNDNLIVSVYNSLDEPFLLSWNGVQQRRNSWQDGVYGTNCPIPPGQNFTYVLQVKDQI
GSYFYFPSLAFHKAAGGYGGIKISSRPLIPVPFPPPAGDYTILAGDWYKKNHTDLKAILD
GGSDLPFPDGLLINGRGSNGYTFTVDQGKTYRFRISNVGIATSLNFRIQGHKMLLVEVEG
THALQNTYSSLDIHLGQSYSVLVTADQPAQDYYIVVSTRFTSQVLTTTSTLHYSNSAGRV
SGPPPGGPTIQTDWSLNQARSIRRNLTASGPRPNPQGSYHYGLINTTHTIRLANSAPVIN
GKQRYAVNSVSFIPADTPLKLADYFKISGVFNLGSIPDNPTGGGGYLQTSVMAADFRGFA
EVVFENPEDTLQSWHIDGHNFFVVGMDGGQWTPSSRLSYNLRDTISRCTVQVYPKSWTAL
YMPLDNVGMWNVRSENWARQYLGQQFYLRVYSPANSWRDEYPIPKNALLCGRASGRKTRP
L

Transcript Sequence

Transcript ID

VIT_12s0059g00770.t01
Transcript Infomation

cdna chromosome:12X:12:5575071:5578295:1 gene:VIT_12s0059g00770 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGAGACATGGGAGATTACAGGGCTGTGAGTTGGGTGTTGCTAGTGTTCGTCTCAGTGAC
TTGCATTAGTGGGGAGGACCCTTACAGGTTCTTCACATGGAATGTCACCTACGGTGATAT
CTACCCTCTTGGAGTGAAGCAACAGGGGATACTGATAAATGGGCAGTTTCCAGGGCCACC
AATCGAATCTGTGACTAATGATAACTTGATTGTCAGTGTTTACAATAGCTTGGATGAGCC
TTTCCTCCTCTCATGGAATGGTGTGCAGCAGAGGAGGAACTCATGGCAGGATGGAGTTTA
TGGCACCAACTGTCCGATTCCACCGGGGCAGAACTTCACCTATGTTCTGCAAGTGAAGGA
TCAAATTGGTAGCTACTTCTACTTTCCTTCTCTTGCCTTCCACAAGGCTGCTGGAGGGTA
TGGGGGCATTAAAATCTCAAGCCGTCCTTTAATTCCAGTACCTTTTCCTCCTCCTGCTGG
CGATTACACTATACTAGCTGGGGACTGGTACAAGAAAAATCACACTGATTTGAAAGCGAT
TTTGGATGGTGGAAGTGATCTTCCTTTCCCTGATGGACTCCTTATCAATGGTCGGGGATC
AAATGGATACACATTTACTGTTGATCAAGGTAAAACTTACAGGTTCCGGATATCTAATGT
GGGGATTGCAACTTCCCTCAATTTTAGAATACAGGGCCACAAGATGCTGCTGGTGGAGGT
GGAGGGGACTCATGCACTGCAGAACACATATTCTTCCCTTGACATTCACCTTGGCCAGTC
ATACTCTGTATTGGTTACAGCTGACCAACCGGCACAGGATTATTACATTGTGGTCTCCAC
ACGTTTCACCTCCCAAGTGCTCACCACAACCTCCACTCTTCATTACAGTAACTCAGCAGG
AAGAGTGTCTGGTCCTCCTCCTGGCGGTCCGACTATTCAGACTGATTGGTCTCTTAACCA
GGCCCGATCTATCAGACGGAATCTAACAGCAAGTGGGCCGAGACCTAATCCTCAAGGATC
TTACCATTATGGATTGATCAACACTACCCATACAATCAGACTTGCAAACTCTGCTCCAGT
TATCAATGGAAAGCAGAGGTATGCAGTTAACAGTGTGTCCTTCATCCCAGCAGATACACC
ACTTAAGCTTGCCGACTACTTCAAGATCTCAGGGGTCTTCAACCTTGGAAGCATCCCAGA
TAACCCCACTGGTGGTGGTGGTTACCTCCAGACTTCTGTCATGGCTGCTGATTTCCGAGG
CTTTGCTGAAGTTGTGTTTGAGAATCCTGAAGACACCTTGCAGTCATGGCACATTGATGG
CCATAATTTCTTTGTTGTGGGGATGGATGGAGGGCAGTGGACACCTTCCAGTAGACTAAG
TTACAATTTGAGAGACACAATTTCTCGTTGTACTGTTCAGGTGTATCCCAAGTCATGGAC
TGCCCTTTACATGCCTTTGGACAATGTGGGTATGTGGAACGTAAGATCAGAGAACTGGGC
TCGCCAATACTTGGGTCAGCAATTCTATCTTCGTGTCTATTCTCCTGCAAACTCATGGAG
AGATGAATATCCAATCCCTAAGAACGCTCTTCTCTGTGGACGAGCATCAGGCCGCAAGAC
CCGGCCTCTATAATTGAGAATGATTTGCACCACTGTCACGAGGGGGTGACAGGGGAGAAA
TACTTCACTGCAGAGGATGTTTGCCA