Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g00560.t01
CDS Infomation

cds chromosome:12X:12:5411867:5418653:-1 gene:VIT_12s0059g00560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTGGTTACGTGGGTGTTATTGTTTCTGATCCATGGCTCCAAAGCCAGTTCACCCAA
GTGGAGCTCCGTGGCCTCAAATCTAAATTTCTCTCCGCAAGGAATCAATCAGGTCAACTA
ACGGTTGAAGATTTGCTGCCAGTCATGGTTAAGTTAAAGGATTTAGGTAAAATTCTTACT
GAGGTGGAGATCAGGGCTATATTGGGAGAGTCCTATTCTAACATGAACGATGAACTTGAC
TTCGAATCCTTCCTTCGGGTATACCTGAATTTACAAGCACGAGCTACTGCAAAACTGGGG
GGTACGAGACATTCATCTTCATTCCTCAAGGCCACAACAACCACCCTTCTCCACACTATT
AGCGAATCAGAGAGGGCCTCGTATGTTGCTCATATCAACAATTACTTGGGAGAAGATCCA
TTCTTGAAGAAATATCTTCCATTAGATCCTGCTACAAATGATTTATTTGATCTTGCAAAA
GATGGAGTTCTTCTCTGTAAGCTTATCAATGTAGCTGTTCCCGGGACAATAGATGAACGA
GCCATTAATACTAAACAGATCCTTAACCCTTGGGAGAGAAATGAGAACCATACTCTTTGC
CTCAACTCTGCAAAGGCTATTGGATGCACTGTAGTTAATATTGGTACACAAGACTTGGTA
GAAGGAAGACACCATCTGGTGGTTGGATTGATTTCTCAAATAATCAAGATCCAACTGTTA
GCCGATCTTAACTTGAAGAAGACTCCTGAACTTGTTGAATTGGTGGATGACAGCAAGGAA
GTGGAGGAGCTTATTGGTTTAGCCCCAGAAAAGCTTTTGCTTAAATGGATGAATTTTCAT
CTGAAGAAAGCAGGCTATGAGAAACCTGTTACAAATTTTTCTTCTGATCTGAAGGATGGG
GAGGCTTATGCTTACCTGCTTAATGCTCTTGCACCAGAACACTGTAACACCTCCACACTG
GATACTAAGGATCCTAATGAAAGAGCAAAAATGATCATTGAACATGCAGAGAAATTGGAT
TGCAAACAATATGTCACTCCAAAGGACATTGTTGAGGGCTCAACAAATCTAAATCTTGCA
TTTGTTGCACAGATATTCCATCACAGAAATGGCCTGTCTGCAGACAGCAGTAAGATGTCC
TTCGCTGAGATGATGACAGATGATGCACAAACTTCAAGGGAAGAGAGATGCTTTCGACTA
TGGATTAACAGTCATGGTATTGGTACATATTGCAATAATCTGTTTGAGGATGTCAGAAAT
GGGTGGGTTCTTTTGGAAATTCTTGACAAAATTTCTCCAGGATCAGTTCACTGGAAGCAA
GCATCAAAGCCTCCTATTAAGATGCCATTTAGAAAAGTTGAGAATTGCAACCAAATTATA
AGGATTGGGAAACAATTAAAATTCTCCCTTGTCAATGTAGCTGGAAATGATTTTGTGCAA
GGAAATAAGAAGCTCATATTAGCTTTCCTGTGGCAGCTGATGAGGTTTTCTATGATCCAA
CTACTGAAAAACTTGAGATCTCACTCCCAAGGAAAGGAGATAACAGATGCTGTCATTCTA
AATTGGGCAAACAACAAAGTAAAGAGAGCAGGCAGGACTTCTCAAATGGAAAGCTTTAAG
GACAAGAACCTTTCGAATGGGATTTTCTTCCTTGAGCTTCTTAGTGCTGTGGAGCCAAGG
GTTGTCAACTGGAACCTTATTACAAAGGGTGAAAGTGATGAGGACAAGAAGTTGAATGCA
ACATATATAATTAGTGTTGCGCGAAAGCTTGGGTGTTCTCTTTTCTTGCTGCCTGAAGAC
ATCATGGAGGTTAACCAGAAGATGATCCTCACCTTAACGGCAAGCATCATGTACTGGAGC
CTGCAGCAACCAGGCAGTGAATTAGAGTTAGAGTCGATCCTGAATGAAGAAAACAAAACT
CCTGATGCTTCTCCAGAACTGGATGGGGAGGGTGAAACTGCTCTGGCTGCTGAGGAGTCC
AATTTGACCATTGATGCTGCTGCTTCAGATTCTGCTCTCTCCCCACATGTAGGAAGTGGG
GAACCTGCTTCACAGGATGAAAAAGAGGAACTAACTCCTGGGGACAAAAAAGAGGAACCG
ACTCCTGGGGACAAAAAAGAGGAACCAACTCCTGGGGATGAAAAAGAGGAACCAACTCCT
GGGGCTGAAAAAGAGGAAACACCTGATGGAGAATGA

Peptide Sequence

PEP ID

VIT_12s0059g00560.t01
PEP Infomation

pep chromosome:12X:12:5411867:5418653:-1 gene:VIT_12s0059g00560 transcript:VIT_12s0059g00560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSGYVGVIVSDPWLQSQFTQVELRGLKSKFLSARNQSGQLTVEDLLPVMVKLKDLGKILT
EVEIRAILGESYSNMNDELDFESFLRVYLNLQARATAKLGGTRHSSSFLKATTTTLLHTI
SESERASYVAHINNYLGEDPFLKKYLPLDPATNDLFDLAKDGVLLCKLINVAVPGTIDER
AINTKQILNPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRHHLVVGLISQIIKIQLL
ADLNLKKTPELVELVDDSKEVEELIGLAPEKLLLKWMNFHLKKAGYEKPVTNFSSDLKDG
EAYAYLLNALAPEHCNTSTLDTKDPNERAKMIIEHAEKLDCKQYVTPKDIVEGSTNLNLA
FVAQIFHHRNGLSADSSKMSFAEMMTDDAQTSREERCFRLWINSHGIGTYCNNLFEDVRN
GWVLLEILDKISPGSVHWKQASKPPIKMPFRKVENCNQIIRIGKQLKFSLVNVAGNDFVQ
GNKKLILAFLWQLMRFSMIQLLKNLRSHSQGKEITDAVILNWANNKVKRAGRTSQMESFK
DKNLSNGIFFLELLSAVEPRVVNWNLITKGESDEDKKLNATYIISVARKLGCSLFLLPED
IMEVNQKMILTLTASIMYWSLQQPGSELELESILNEENKTPDASPELDGEGETALAAEES
NLTIDAAASDSALSPHVGSGEPASQDEKEELTPGDKKEEPTPGDKKEEPTPGDEKEEPTP
GAEKEETPDGE

Transcript Sequence

Transcript ID

VIT_12s0059g00560.t01
Transcript Infomation

cdna chromosome:12X:12:5411867:5418653:-1 gene:VIT_12s0059g00560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTGGTTACGTGGGTGTTATTGTTTCTGATCCATGGCTCCAAAGCCAGTTCACCCAA
GTGGAGCTCCGTGGCCTCAAATCTAAATTTCTCTCCGCAAGGAATCAATCAGGTCAACTA
ACGGTTGAAGATTTGCTGCCAGTCATGGTTAAGTTAAAGGATTTAGGTAAAATTCTTACT
GAGGTGGAGATCAGGGCTATATTGGGAGAGTCCTATTCTAACATGAACGATGAACTTGAC
TTCGAATCCTTCCTTCGGGTATACCTGAATTTACAAGCACGAGCTACTGCAAAACTGGGG
GGTACGAGACATTCATCTTCATTCCTCAAGGCCACAACAACCACCCTTCTCCACACTATT
AGCGAATCAGAGAGGGCCTCGTATGTTGCTCATATCAACAATTACTTGGGAGAAGATCCA
TTCTTGAAGAAATATCTTCCATTAGATCCTGCTACAAATGATTTATTTGATCTTGCAAAA
GATGGAGTTCTTCTCTGTAAGCTTATCAATGTAGCTGTTCCCGGGACAATAGATGAACGA
GCCATTAATACTAAACAGATCCTTAACCCTTGGGAGAGAAATGAGAACCATACTCTTTGC
CTCAACTCTGCAAAGGCTATTGGATGCACTGTAGTTAATATTGGTACACAAGACTTGGTA
GAAGGAAGACACCATCTGGTGGTTGGATTGATTTCTCAAATAATCAAGATCCAACTGTTA
GCCGATCTTAACTTGAAGAAGACTCCTGAACTTGTTGAATTGGTGGATGACAGCAAGGAA
GTGGAGGAGCTTATTGGTTTAGCCCCAGAAAAGCTTTTGCTTAAATGGATGAATTTTCAT
CTGAAGAAAGCAGGCTATGAGAAACCTGTTACAAATTTTTCTTCTGATCTGAAGGATGGG
GAGGCTTATGCTTACCTGCTTAATGCTCTTGCACCAGAACACTGTAACACCTCCACACTG
GATACTAAGGATCCTAATGAAAGAGCAAAAATGATCATTGAACATGCAGAGAAATTGGAT
TGCAAACAATATGTCACTCCAAAGGACATTGTTGAGGGCTCAACAAATCTAAATCTTGCA
TTTGTTGCACAGATATTCCATCACAGAAATGGCCTGTCTGCAGACAGCAGTAAGATGTCC
TTCGCTGAGATGATGACAGATGATGCACAAACTTCAAGGGAAGAGAGATGCTTTCGACTA
TGGATTAACAGTCATGGTATTGGTACATATTGCAATAATCTGTTTGAGGATGTCAGAAAT
GGGTGGGTTCTTTTGGAAATTCTTGACAAAATTTCTCCAGGATCAGTTCACTGGAAGCAA
GCATCAAAGCCTCCTATTAAGATGCCATTTAGAAAAGTTGAGAATTGCAACCAAATTATA
AGGATTGGGAAACAATTAAAATTCTCCCTTGTCAATGTAGCTGGAAATGATTTTGTGCAA
GGAAATAAGAAGCTCATATTAGCTTTCCTGTGGCAGCTGATGAGGTTTTCTATGATCCAA
CTACTGAAAAACTTGAGATCTCACTCCCAAGGAAAGGAGATAACAGATGCTGTCATTCTA
AATTGGGCAAACAACAAAGTAAAGAGAGCAGGCAGGACTTCTCAAATGGAAAGCTTTAAG
GACAAGAACCTTTCGAATGGGATTTTCTTCCTTGAGCTTCTTAGTGCTGTGGAGCCAAGG
GTTGTCAACTGGAACCTTATTACAAAGGGTGAAAGTGATGAGGACAAGAAGTTGAATGCA
ACATATATAATTAGTGTTGCGCGAAAGCTTGGGTGTTCTCTTTTCTTGCTGCCTGAAGAC
ATCATGGAGGTTAACCAGAAGATGATCCTCACCTTAACGGCAAGCATCATGTACTGGAGC
CTGCAGCAACCAGGCAGTGAATTAGAGTTAGAGTCGATCCTGAATGAAGAAAACAAAACT
CCTGATGCTTCTCCAGAACTGGATGGGGAGGGTGAAACTGCTCTGGCTGCTGAGGAGTCC
AATTTGACCATTGATGCTGCTGCTTCAGATTCTGCTCTCTCCCCACATGTAGGAAGTGGG
GAACCTGCTTCACAGGATGAAAAAGAGGAACTAACTCCTGGGGACAAAAAAGAGGAACCG
ACTCCTGGGGACAAAAAAGAGGAACCAACTCCTGGGGATGAAAAAGAGGAACCAACTCCT
GGGGCTGAAAAAGAGGAAACACCTGATGGAGAATGA