Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g00530.t01
CDS Infomation

cds chromosome:12X:12:5375838:5388247:-1 gene:VIT_12s0059g00530 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGAGATATACGTTTATAGATGACCGGGATGACAATGATGAAGATGAAGAAAATGAC
GAAGACAATGATGAACTGTTTGATTCTGTTTGTGCAATTTGTGACAATGGCGGTGAACTT
CTATGTTGTGAAGGAAGGTGCTTAAGATCTTTTCATGCAACTGTAGATGCTGGAACTGAA
TCCTTTTGTGAATCTCTTGGGTTTTCTGATGCTCAAGTTGAAGCAATTCAGAATTTTCTT
TGTAAGAATTGTCAATATCAGCAGCATCAATGCTTTGTTTGTGGCATGTTGGGATCTTCT
AATGAGTCATCTGGTGCAGAAGTCTTCCGTTGTGCGTCTGCAACTTGTGGTCGGTTTTAT
CATCCATATTGTGTTGCGAAACGGCTCCACCCTATGAATAACATTCTAGCAAAACATCTT
CAAAATAAAATTGCTGGGGGGGTCTCATTTACATGTCCTCTCCACAAATGTTTTGTTTGC
AAAAGAGGAGAAAATAAAGGGGTTGATGACTTGCAGTTTGCGCTGTGTAGACGCTGTCCT
AAGGCATACCACAGAAAATGTTTACCCGGGAATATTTCTTTTGAATGTATCTATAATGAA
AATATCATGCAAAGGGCTTGGATTGGTCTGTTGCCAAATCGGATCTTGATATATTGCATG
GAGCATAAGATAAACAGAAAACTTCGAACTCCCGAAAGAAACCACATAAGATTTCCTGAT
CCTGAAAGTAAAGGGAAGAAACATGTTTCAGAGCTACCATCAAGCAATGAGAAAGTTATG
TCAAAGAAAAGAAACATAGTTTCTGAAATTTTCCCAGCAGAAAGCACTGCAGTAAAGATG
ACAAAGTTGGAGGTTCATAGAGTTGTTAAAGATGTTGATTCTACGAAATTTTTTGAGAAA
AGATGTTCCAGCCAAGGTTTTGATCCCCCAACCAAACAGAAAATTAATGATGCAACTAAA
AAGTTTTTGAGGGACAATGTCAAGTCTGTCCCAGTCAAAATATGCGCGTCTGTTGCAGTA
AAGGGAACCCAGTCATCCTTGAGAAACTATAATATTAAGCCTAAGCAGCAGAATATCCCA
AGTAAAGTGGAGAAGATCACATCACTTAAGCCTTCAATGAAGAGGGCAAGCAGCTCACAA
CCTTTGATGGATGCTGAATTGGAAACACGAATAGTTGATTTAATGAAAAGTACCACTTCT
TCCTTTAGTTTGGAAGAATTCAGAGAAAAGCAGAAAGTCTTATGTTCATACTCAAAAAAT
GTACTGGACAGCACCATTACGCAAGGAAAGGTGGAGGTTTCTGTCAAGGCCATTCGGACA
GCCTTAGAGAAGTTAGAAAAGGGATGTAGCATTGAAGATGCTAAAGCTGTTTGTGAACCT
GAGGTTCTCAATCAGATTATGAGATGGAAGAGAAAGCTAAAAGTTTACCTTGCACCTTTT
CTGCATGGCATGCGTTACACATCCTTTGGCCGTCATTTCACAAAAGTGGAGAAACTTAGG
GAGGTTGTTGATAGGCTCCATTGGTATGTGCAACATGGTGATATGATAGTGGACTTCTGC
TGTGGTTCCAATGATTTTAGTTGCTTGATGAAAGAAAAGCTTGACAAAGTGGGAAAGAGC
TGCTCATTTAAAAATTATGATCTTATTCAACCCAAGAATGATTTCAGTTTCGAGAAGAGA
GATTGGATGAGCATTCATTTAGATGAACTACCTGCAGGATCTCAACTGATCATGGGGCTT
AATCCTCCCTTTGGGGTCAAAGCATCTCTTGCCAACAAGTTCATTGACAAGGCACTAAGT
TTTAGACCAAAGCTCCTTATTCTTATCGTTCCAAAAGAAACCAAAAGACTTGATGAAAAA
GACTCTGCATATGATTTAATATGGGAGGATGAAGATATACTATCAGGAAAGTCATTTTAC
CTGCCTGGATCTGTTGACATGCATGACAAGCAATTAGAGCAATGGAACTTACTGCCACCA
TTGCTCTATCTTTGGAGTCGCCCTGACTGGACTTCTAGGCACAAGGCAGTGGCTCAAAAG
TGTGGCCACATATCCATAGAGCAAAAGGACTTTCTTGTGGAAGGCAATAATGTTGAAAGA
GAAGTCTCAAATTATCTAATGGAGGAGAATCATGACTGTTATGGTGATTTCTCCAATCTA
ATGAATGACTATGGTGATATCTCCAGCATCTTGGACAATGTTCCTGAAGATAATGATGAA
AGTGAACCTGAAGGTACTGGGATGTTGTTTTTTGGTCCTTCTTCCAGTAACAGAAGCAGT
GAAGTTTTGAAGAAAGATGAGTGTGACATGGGACCTTCTATTGAGAGACTAAAGAAGGAA
TGTGAAGGAAAGGAGGATGTAGACCGGATTGTGACATCAATAGAGCAAAGTGGCAACAGT
GAGACAGAGCCTAAAGTTGATGGAATGTGCATTGACATGGAAATATCATCTCCAGTTAAT
TCTGCATTTGACTGCACAGACTTCCAAAGTTTGTTGGAGGACAAGGCATATGAAGCAGTT
GAAGTTGGAAAAATTGGCTTTGGAAATCTCCAGAGAAGGCTCTCGGGAAATAAGTTGGGG
TTTAAAAAAAATTATGTGGGAATCAGGGCCAGTATTTCAAGTGACACTGATGGACAAAGT
TTGATGAATCAACAACCATTTCCTAGAGAAACTCATAAACTGTCAACCCGAGCCAATATT
GGTTTCAATAGTCATAATCAGTTTCATGGGTACATCAATCCTGGTGTCGGTACTTCTGTT
GGGGCATCTTACAAAAATGAGCCAGATAAGCAAAGGTCTGAGACAAATACAAGCACACAC
CTCCCGCTCAACAGACAAAACCATGATCTTCCATCTCAAGGGTTCATTTTACCTAATCAA
GGTTCTGACTCTTACCATGTTGGTTCACTCCCTTATGCTCCTGCACCCATGGCCCAATCA
TCCTACCCCAGGGCGAACTACTCATCGATGCAGCTAGATGGACCTCAATCAGGGCAGTTA
AATCATATGATGCCAAGTAACTATAGGCCTCCTAAGTGA

Peptide Sequence

PEP ID

VIT_12s0059g00530.t01
PEP Infomation

pep chromosome:12X:12:5375838:5388247:-1 gene:VIT_12s0059g00530 transcript:VIT_12s0059g00530.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRRYTFIDDRDDNDEDEENDEDNDELFDSVCAICDNGGELLCCEGRCLRSFHATVDAGTE
SFCESLGFSDAQVEAIQNFLCKNCQYQQHQCFVCGMLGSSNESSGAEVFRCASATCGRFY
HPYCVAKRLHPMNNILAKHLQNKIAGGVSFTCPLHKCFVCKRGENKGVDDLQFALCRRCP
KAYHRKCLPGNISFECIYNENIMQRAWIGLLPNRILIYCMEHKINRKLRTPERNHIRFPD
PESKGKKHVSELPSSNEKVMSKKRNIVSEIFPAESTAVKMTKLEVHRVVKDVDSTKFFEK
RCSSQGFDPPTKQKINDATKKFLRDNVKSVPVKICASVAVKGTQSSLRNYNIKPKQQNIP
SKVEKITSLKPSMKRASSSQPLMDAELETRIVDLMKSTTSSFSLEEFREKQKVLCSYSKN
VLDSTITQGKVEVSVKAIRTALEKLEKGCSIEDAKAVCEPEVLNQIMRWKRKLKVYLAPF
LHGMRYTSFGRHFTKVEKLREVVDRLHWYVQHGDMIVDFCCGSNDFSCLMKEKLDKVGKS
CSFKNYDLIQPKNDFSFEKRDWMSIHLDELPAGSQLIMGLNPPFGVKASLANKFIDKALS
FRPKLLILIVPKETKRLDEKDSAYDLIWEDEDILSGKSFYLPGSVDMHDKQLEQWNLLPP
LLYLWSRPDWTSRHKAVAQKCGHISIEQKDFLVEGNNVEREVSNYLMEENHDCYGDFSNL
MNDYGDISSILDNVPEDNDESEPEGTGMLFFGPSSSNRSSEVLKKDECDMGPSIERLKKE
CEGKEDVDRIVTSIEQSGNSETEPKVDGMCIDMEISSPVNSAFDCTDFQSLLEDKAYEAV
EVGKIGFGNLQRRLSGNKLGFKKNYVGIRASISSDTDGQSLMNQQPFPRETHKLSTRANI
GFNSHNQFHGYINPGVGTSVGASYKNEPDKQRSETNTSTHLPLNRQNHDLPSQGFILPNQ
GSDSYHVGSLPYAPAPMAQSSYPRANYSSMQLDGPQSGQLNHMMPSNYRPPK

Transcript Sequence

Transcript ID

VIT_12s0059g00530.t01
Transcript Infomation

cdna chromosome:12X:12:5375838:5388247:-1 gene:VIT_12s0059g00530 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGAGATATACGTTTATAGATGACCGGGATGACAATGATGAAGATGAAGAAAATGAC
GAAGACAATGATGAACTGTTTGATTCTGTTTGTGCAATTTGTGACAATGGCGGTGAACTT
CTATGTTGTGAAGGAAGGTGCTTAAGATCTTTTCATGCAACTGTAGATGCTGGAACTGAA
TCCTTTTGTGAATCTCTTGGGTTTTCTGATGCTCAAGTTGAAGCAATTCAGAATTTTCTT
TGTAAGAATTGTCAATATCAGCAGCATCAATGCTTTGTTTGTGGCATGTTGGGATCTTCT
AATGAGTCATCTGGTGCAGAAGTCTTCCGTTGTGCGTCTGCAACTTGTGGTCGGTTTTAT
CATCCATATTGTGTTGCGAAACGGCTCCACCCTATGAATAACATTCTAGCAAAACATCTT
CAAAATAAAATTGCTGGGGGGGTCTCATTTACATGTCCTCTCCACAAATGTTTTGTTTGC
AAAAGAGGAGAAAATAAAGGGGTTGATGACTTGCAGTTTGCGCTGTGTAGACGCTGTCCT
AAGGCATACCACAGAAAATGTTTACCCGGGAATATTTCTTTTGAATGTATCTATAATGAA
AATATCATGCAAAGGGCTTGGATTGGTCTGTTGCCAAATCGGATCTTGATATATTGCATG
GAGCATAAGATAAACAGAAAACTTCGAACTCCCGAAAGAAACCACATAAGATTTCCTGAT
CCTGAAAGTAAAGGGAAGAAACATGTTTCAGAGCTACCATCAAGCAATGAGAAAGTTATG
TCAAAGAAAAGAAACATAGTTTCTGAAATTTTCCCAGCAGAAAGCACTGCAGTAAAGATG
ACAAAGTTGGAGGTTCATAGAGTTGTTAAAGATGTTGATTCTACGAAATTTTTTGAGAAA
AGATGTTCCAGCCAAGGTTTTGATCCCCCAACCAAACAGAAAATTAATGATGCAACTAAA
AAGTTTTTGAGGGACAATGTCAAGTCTGTCCCAGTCAAAATATGCGCGTCTGTTGCAGTA
AAGGGAACCCAGTCATCCTTGAGAAACTATAATATTAAGCCTAAGCAGCAGAATATCCCA
AGTAAAGTGGAGAAGATCACATCACTTAAGCCTTCAATGAAGAGGGCAAGCAGCTCACAA
CCTTTGATGGATGCTGAATTGGAAACACGAATAGTTGATTTAATGAAAAGTACCACTTCT
TCCTTTAGTTTGGAAGAATTCAGAGAAAAGCAGAAAGTCTTATGTTCATACTCAAAAAAT
GTACTGGACAGCACCATTACGCAAGGAAAGGTGGAGGTTTCTGTCAAGGCCATTCGGACA
GCCTTAGAGAAGTTAGAAAAGGGATGTAGCATTGAAGATGCTAAAGCTGTTTGTGAACCT
GAGGTTCTCAATCAGATTATGAGATGGAAGAGAAAGCTAAAAGTTTACCTTGCACCTTTT
CTGCATGGCATGCGTTACACATCCTTTGGCCGTCATTTCACAAAAGTGGAGAAACTTAGG
GAGGTTGTTGATAGGCTCCATTGGTATGTGCAACATGGTGATATGATAGTGGACTTCTGC
TGTGGTTCCAATGATTTTAGTTGCTTGATGAAAGAAAAGCTTGACAAAGTGGGAAAGAGC
TGCTCATTTAAAAATTATGATCTTATTCAACCCAAGAATGATTTCAGTTTCGAGAAGAGA
GATTGGATGAGCATTCATTTAGATGAACTACCTGCAGGATCTCAACTGATCATGGGGCTT
AATCCTCCCTTTGGGGTCAAAGCATCTCTTGCCAACAAGTTCATTGACAAGGCACTAAGT
TTTAGACCAAAGCTCCTTATTCTTATCGTTCCAAAAGAAACCAAAAGACTTGATGAAAAA
GACTCTGCATATGATTTAATATGGGAGGATGAAGATATACTATCAGGAAAGTCATTTTAC
CTGCCTGGATCTGTTGACATGCATGACAAGCAATTAGAGCAATGGAACTTACTGCCACCA
TTGCTCTATCTTTGGAGTCGCCCTGACTGGACTTCTAGGCACAAGGCAGTGGCTCAAAAG
TGTGGCCACATATCCATAGAGCAAAAGGACTTTCTTGTGGAAGGCAATAATGTTGAAAGA
GAAGTCTCAAATTATCTAATGGAGGAGAATCATGACTGTTATGGTGATTTCTCCAATCTA
ATGAATGACTATGGTGATATCTCCAGCATCTTGGACAATGTTCCTGAAGATAATGATGAA
AGTGAACCTGAAGGTACTGGGATGTTGTTTTTTGGTCCTTCTTCCAGTAACAGAAGCAGT
GAAGTTTTGAAGAAAGATGAGTGTGACATGGGACCTTCTATTGAGAGACTAAAGAAGGAA
TGTGAAGGAAAGGAGGATGTAGACCGGATTGTGACATCAATAGAGCAAAGTGGCAACAGT
GAGACAGAGCCTAAAGTTGATGGAATGTGCATTGACATGGAAATATCATCTCCAGTTAAT
TCTGCATTTGACTGCACAGACTTCCAAAGTTTGTTGGAGGACAAGGCATATGAAGCAGTT
GAAGTTGGAAAAATTGGCTTTGGAAATCTCCAGAGAAGGCTCTCGGGAAATAAGTTGGGG
TTTAAAAAAAATTATGTGGGAATCAGGGCCAGTATTTCAAGTGACACTGATGGACAAAGT
TTGATGAATCAACAACCATTTCCTAGAGAAACTCATAAACTGTCAACCCGAGCCAATATT
GGTTTCAATAGTCATAATCAGTTTCATGGGTACATCAATCCTGGTGTCGGTACTTCTGTT
GGGGCATCTTACAAAAATGAGCCAGATAAGCAAAGGTCTGAGACAAATACAAGCACACAC
CTCCCGCTCAACAGACAAAACCATGATCTTCCATCTCAAGGGTTCATTTTACCTAATCAA
GGTTCTGACTCTTACCATGTTGGTTCACTCCCTTATGCTCCTGCACCCATGGCCCAATCA
TCCTACCCCAGGGCGAACTACTCATCGATGCAGCTAGATGGACCTCAATCAGGGCAGTTA
AATCATATGATGCCAAGTAACTATAGGCCTCCTAAGTGAAAAAAGTGTTAGTTATG