Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g00300.t01
CDS Infomation

cds chromosome:12X:12:5162486:5170137:1 gene:VIT_12s0059g00300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGCATTGTGTCCAAGGAGACAATTGAGGTCATAGCACAGAGCATTGGAATTGCCAAT
CTGTCTGCTGATGTTGCACTTGCCCTTGCTCCTGATGTGGAATATCGCATGCGTGAGGTC
ATGCAGGAGGCAATCAAATGCATGCGGCACTCAAAGAGAACTGTATTGACAACAGACGAT
GTTGATATTGCACTCAACTTAAGAAATGTTGAGCCAATTTATGGCTTTACCTCGGGAGGT
CCGCTGCGGTTCAAAAGAGCTGTTGGACATAAGAATTTGTTTTACATCGATGACAAGGAT
TTGGATTTCAAAGATGTGATTGAAGCTCCTTTACCGAAAGCACCACTTGATGCTGCAGTA
GTTTGTCACTGGCTGGCTATTGAAGGTGTACAACCAGCTATTCCAGAAAATGCTCCAGTA
GAAGTCATTGCAGCTCCTTCTGATGGCAAAAAGTTTGAACAAAAAGATGATGGGCTTCCT
GTTGACATTAAATTACCCATTAAGCATGTATTGTCTAGGGAGCTTCAGCTATACTTTGAT
AAAATAATTGATCTAACGGTGAATAGGTCAGACTCTGCCCTTTTTAAAGAGGCATTAGTG
AGCTTGGCTACAGACTCAGGACTTCACCCATTAGTTCCTTATTTTACATACTTCATCTCC
GATGAGGTATCTCGTGGTCTGAATGATTTCAACCTCCTGTTTGCTTTGATGCGTGTGGTT
TGGAGTCTTCTTCAGAATCCTCACATACACATAGAACCTTATCTGCACCAATTAATGCCA
TCTGTGGTTACCTGCCTTGTTGCAAAACGAATTGGAAATAGACTTGCAGACAACCACTGG
GAACTTCGAGACTTCACAGCAAACCTGGTTGCTTCAATATGCAAAAGATTTGGGCATGTT
TATAACAATCTGCAAACGCGGCTGACAAAGACTCTGCTCCATGCGTTTTTAGACCCAAAA
CGTTCTATGACCCAACACTATGGTGCAATTCAAGGTTTAGCAGCTCTAGGACCAAATATG
GTTCGCCTACTTATAGTGCCAAATCTTGAACCATACCTTCGACTTCTTGAACCTGAGATG
CTCCTTGAGAAGCAGAAGAATGAGCTAAAGAGGCATGAAGCATGGTGTGTTTATGGGGCC
TTGCTGCGTGCGACAGGTCAATCCATATATGATCGGCTCAAAATGTTCCCAGCTTTGCCA
TCCCCACCAGCACGTGTTTTCAGGACCAACGGAAGGGTAGTTACATCACCACCAAATAAA
CGCAAGGCAAACAATGAGCACTTGGAGCAGCAGCCATCTCTCAAGAAGATAGCGACAGAT
GGCCCAATGGATGTGGTGCCAACCAACTTGTCATCTAACATGCAACCGCCAGAAACAAAA
GGTCCTGTTCCTTCGACTGATCCTGACATGGGCCCATCATCATCTTCCAGGCAGATACCT
CATGGAAACATTTCAGATAGCAGAGATAGAAAAGGTAAGGGTGATAGTCGAGCTTTGAAG
ATGTCGGCTGTCCTCACCCAAACTTGGAGGGATGACTTGAAATCTGGGCATCTTCTGGTA
TCGCTGTTTGAGTTGTTTGGTGAAAGCATTTTGCCCTTCATTCCAGCTCCTGAGATGTCT
TTGTTCTTGTAA

Peptide Sequence

PEP ID

VIT_12s0059g00300.t01
PEP Infomation

pep chromosome:12X:12:5162486:5170137:1 gene:VIT_12s0059g00300 transcript:VIT_12s0059g00300.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSIVSKETIEVIAQSIGIANLSADVALALAPDVEYRMREVMQEAIKCMRHSKRTVLTTDD
VDIALNLRNVEPIYGFTSGGPLRFKRAVGHKNLFYIDDKDLDFKDVIEAPLPKAPLDAAV
VCHWLAIEGVQPAIPENAPVEVIAAPSDGKKFEQKDDGLPVDIKLPIKHVLSRELQLYFD
KIIDLTVNRSDSALFKEALVSLATDSGLHPLVPYFTYFISDEVSRGLNDFNLLFALMRVV
WSLLQNPHIHIEPYLHQLMPSVVTCLVAKRIGNRLADNHWELRDFTANLVASICKRFGHV
YNNLQTRLTKTLLHAFLDPKRSMTQHYGAIQGLAALGPNMVRLLIVPNLEPYLRLLEPEM
LLEKQKNELKRHEAWCVYGALLRATGQSIYDRLKMFPALPSPPARVFRTNGRVVTSPPNK
RKANNEHLEQQPSLKKIATDGPMDVVPTNLSSNMQPPETKGPVPSTDPDMGPSSSSRQIP
HGNISDSRDRKGKGDSRALKMSAVLTQTWRDDLKSGHLLVSLFELFGESILPFIPAPEMS
LFL

Transcript Sequence

Transcript ID

VIT_12s0059g00300.t01
Transcript Infomation

cdna chromosome:12X:12:5162486:5170137:1 gene:VIT_12s0059g00300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTTAATCCATGGGACATTATTGAAAACAAGAAAATGAGCATTGTGTCCAAGGAGACAAT
TGAGGTCATAGCACAGAGCATTGGAATTGCCAATCTGTCTGCTGATGTTGCACTTGCCCT
TGCTCCTGATGTGGAATATCGCATGCGTGAGGTCATGCAGGAGGCAATCAAATGCATGCG
GCACTCAAAGAGAACTGTATTGACAACAGACGATGTTGATATTGCACTCAACTTAAGAAA
TGTTGAGCCAATTTATGGCTTTACCTCGGGAGGTCCGCTGCGGTTCAAAAGAGCTGTTGG
ACATAAGAATTTGTTTTACATCGATGACAAGGATTTGGATTTCAAAGATGTGATTGAAGC
TCCTTTACCGAAAGCACCACTTGATGCTGCAGTAGTTTGTCACTGGCTGGCTATTGAAGG
TGTACAACCAGCTATTCCAGAAAATGCTCCAGTAGAAGTCATTGCAGCTCCTTCTGATGG
CAAAAAGTTTGAACAAAAAGATGATGGGCTTCCTGTTGACATTAAATTACCCATTAAGCA
TGTATTGTCTAGGGAGCTTCAGCTATACTTTGATAAAATAATTGATCTAACGGTGAATAG
GTCAGACTCTGCCCTTTTTAAAGAGGCATTAGTGAGCTTGGCTACAGACTCAGGACTTCA
CCCATTAGTTCCTTATTTTACATACTTCATCTCCGATGAGGTATCTCGTGGTCTGAATGA
TTTCAACCTCCTGTTTGCTTTGATGCGTGTGGTTTGGAGTCTTCTTCAGAATCCTCACAT
ACACATAGAACCTTATCTGCACCAATTAATGCCATCTGTGGTTACCTGCCTTGTTGCAAA
ACGAATTGGAAATAGACTTGCAGACAACCACTGGGAACTTCGAGACTTCACAGCAAACCT
GGTTGCTTCAATATGCAAAAGATTTGGGCATGTTTATAACAATCTGCAAACGCGGCTGAC
AAAGACTCTGCTCCATGCGTTTTTAGACCCAAAACGTTCTATGACCCAACACTATGGTGC
AATTCAAGGTTTAGCAGCTCTAGGACCAAATATGGTTCGCCTACTTATAGTGCCAAATCT
TGAACCATACCTTCGACTTCTTGAACCTGAGATGCTCCTTGAGAAGCAGAAGAATGAGCT
AAAGAGGCATGAAGCATGGTGTGTTTATGGGGCCTTGCTGCGTGCGACAGGTCAATCCAT
ATATGATCGGCTCAAAATGTTCCCAGCTTTGCCATCCCCACCAGCACGTGTTTTCAGGAC
CAACGGAAGGGTAGTTACATCACCACCAAATAAACGCAAGGCAAACAATGAGCACTTGGA
GCAGCAGCCATCTCTCAAGAAGATAGCGACAGATGGCCCAATGGATGTGGTGCCAACCAA
CTTGTCATCTAACATGCAACCGCCAGAAACAAAAGGTCCTGTTCCTTCGACTGATCCTGA
CATGGGCCCATCATCATCTTCCAGGCAGATACCTCATGGAAACATTTCAGATAGCAGAGA
TAGAAAAGGTAAGGGTGATAGTCGAGCTTTGAAGATGTCGGCTGTCCTCACCCAAACTTG
GAGGGATGACTTGAAATCTGGGCATCTTCTGGTATCGCTGTTTGAGTTGTTTGGTGAAAG
CATTTTGCCCTTCATTCCAGCTCCTGAGATGTCTTTGTTCTTGTAACCATTCCGACAGAA
AGATTAAAAAATCTGTTGCTGCCATGGTATATAATTCATGGAATCGCTTCAATTCAAGAA
AAGAACATATAGAAAAATAAGTCCGCTAGCGATTCAAATACCTCAACAAAATCAACAAAC
AAT