Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g00290.t01
CDS Infomation

cds chromosome:12X:12:5149731:5152190:-1 gene:VIT_12s0059g00290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTATCACTGGAGAGCTGGTAAGGAGTGTCTTCTCCAAGAGCCGGTCCGTCAGCACC
CATGAGAGCAATGTAAGGAACAATATGGTGGATAAGAGGAGATGGAGCTCGGTGAGATCA
TACCTATGTGGGGATGAATTCAACTCAGTCCTGGCAGAGGAGGATTCAGCCTCTGTTAGG
AGTTCAGAGGCCACTGTCACACAGCCTATACCAGATGAATTAACAGATGAAGGGGATCTC
CAGAGCAAAGAGGCTAAAAAACAACAAAAGCAGAATTCAGCCTCCAATTTTTTCAGTGAA
GAAGAGGCTGCAATTGTCATCCAGTCAGCATTTAGAGGCTTTCTGGCTAGGCGTCGAAAT
GAAGGAACAAAAGTAATGGATGGTGGGCAGGAGCTTCTTCTAGGAATAGAAAATCCAAGT
AGGGAGTCTGTGGACACATCACTGGAAGTCCAAACAGGAAATTCTGTGGAAGTTCTCTCA
GATGGGGAGGGAAGCGTTGCGGCTCATGCTCGGATGCAGCATAAAGCCAGAGCTCAAGCA
ACCAAGTTTAAGGACGACTGGGATGATAGCACAGTGAGTAGCAAGGTGTTAAAAATGAGA
ATTCAGAACAGGATGGAGGCGACAACCAGGAGAGAAAGAGCTCTAGCCTATGCTTTTGCA
CAACAGTTGCGAATCTGTTCGAAGAAAAAACAAACTAGATCTGATGGTGAAGAAACAAAC
ATGGGTTGGAGCTGGCTAGAGCGGTGGATGGCGACTCGCCTTCCTGGAAGCTCCTCAGTT
GAAGATCATGTAAGTGGGCAGCTAGAGCCAACTATGAGCATTCAAAGCTCAGTGATGAGG
AAGAACTTTTTCGATGTTGGGGGAGAAGAAAGGGAGAGTTGTGGATCTAATGAGGTTGCT
GCTCAGATTGATAATTTTCCTGTGATTTCCCCAAAAGTGAAAGATAGCTCTAAGCACCTA
AGCTCAGGCTTAAGGTTACAAGAGGTGTGTCGAGGCGAAAAACTGTGCCAAACAATCACT
GCCCAAAAGAGAATACCAAGCAAGAAAGACCGTCCAAGACTGATAAGAAGCGCAAGCAAG
AACAACCAGGAATTTACAGAGAGATCAAATGCAAAGATGCTTCGTCCCACTATCAACAGG
ACTCAGTGA

Peptide Sequence

PEP ID

VIT_12s0059g00290.t01
PEP Infomation

pep chromosome:12X:12:5149731:5152190:-1 gene:VIT_12s0059g00290 transcript:VIT_12s0059g00290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGITGELVRSVFSKSRSVSTHESNVRNNMVDKRRWSSVRSYLCGDEFNSVLAEEDSASVR
SSEATVTQPIPDELTDEGDLQSKEAKKQQKQNSASNFFSEEEAAIVIQSAFRGFLARRRN
EGTKVMDGGQELLLGIENPSRESVDTSLEVQTGNSVEVLSDGEGSVAAHARMQHKARAQA
TKFKDDWDDSTVSSKVLKMRIQNRMEATTRRERALAYAFAQQLRICSKKKQTRSDGEETN
MGWSWLERWMATRLPGSSSVEDHVSGQLEPTMSIQSSVMRKNFFDVGGEERESCGSNEVA
AQIDNFPVISPKVKDSSKHLSSGLRLQEVCRGEKLCQTITAQKRIPSKKDRPRLIRSASK
NNQEFTERSNAKMLRPTINRTQ

Transcript Sequence

Transcript ID

VIT_12s0059g00290.t01
Transcript Infomation

cdna chromosome:12X:12:5149731:5152190:-1 gene:VIT_12s0059g00290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTTTGAATGAATTGGAGACAAACCCATTTGGGAATTCCGCTTCAGGATCTCTCTACTGA
GATGGGTATCACTGGAGAGCTGGTAAGGAGTGTCTTCTCCAAGAGCCGGTCCGTCAGCAC
CCATGAGAGCAATGTAAGGAACAATATGGTGGATAAGAGGAGATGGAGCTCGGTGAGATC
ATACCTATGTGGGGATGAATTCAACTCAGTCCTGGCAGAGGAGGATTCAGCCTCTGTTAG
GAGTTCAGAGGCCACTGTCACACAGCCTATACCAGATGAATTAACAGATGAAGGGGATCT
CCAGAGCAAAGAGGCTAAAAAACAACAAAAGCAGAATTCAGCCTCCAATTTTTTCAGTGA
AGAAGAGGCTGCAATTGTCATCCAGTCAGCATTTAGAGGCTTTCTGGCTAGGCGTCGAAA
TGAAGGAACAAAAGTAATGGATGGTGGGCAGGAGCTTCTTCTAGGAATAGAAAATCCAAG
TAGGGAGTCTGTGGACACATCACTGGAAGTCCAAACAGGAAATTCTGTGGAAGTTCTCTC
AGATGGGGAGGGAAGCGTTGCGGCTCATGCTCGGATGCAGCATAAAGCCAGAGCTCAAGC
AACCAAGTTTAAGGACGACTGGGATGATAGCACAGTGAGTAGCAAGGTGTTAAAAATGAG
AATTCAGAACAGGATGGAGGCGACAACCAGGAGAGAAAGAGCTCTAGCCTATGCTTTTGC
ACAACAGTTGCGAATCTGTTCGAAGAAAAAACAAACTAGATCTGATGGTGAAGAAACAAA
CATGGGTTGGAGCTGGCTAGAGCGGTGGATGGCGACTCGCCTTCCTGGAAGCTCCTCAGT
TGAAGATCATGTAAGTGGGCAGCTAGAGCCAACTATGAGCATTCAAAGCTCAGTGATGAG
GAAGAACTTTTTCGATGTTGGGGGAGAAGAAAGGGAGAGTTGTGGATCTAATGAGGTTGC
TGCTCAGATTGATAATTTTCCTGTGATTTCCCCAAAAGTGAAAGATAGCTCTAAGCACCT
AAGCTCAGGCTTAAGGTTACAAGAGGTGTGTCGAGGCGAAAAACTGTGCCAAACAATCAC
TGCCCAAAAGAGAATACCAAGCAAGAAAGACCGTCCAAGACTGATAAGAAGCGCAAGCAA
GAACAACCAGGAATTTACAGAGAGATCAAATGCAAAGATGCTTCGTCCCACTATCAACAG
GACTCAGTGAAAACTTCCATTTGGTGTTAAAATCTATCAAGTGATCATGAGGCTCTTGTT
TCTGTCTAGACTGTATGTTTTCCATAATGAGTGTCTGGTTTCTGAATATTGAATTCTCCT
GAACATGTTATGATTTTCATATCTTATTTGATAAAAAAGGTTCCTACTCATTGAAC