Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0057g01300.t01
CDS Infomation

cds chromosome:12X:12:10048685:10051304:1 gene:VIT_12s0057g01300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAGATTCTGAGGAGGGGGAGATATGGACGCAGCAGAAGCGAACCCTAATTGATGGA
GTGGCTGAGAGGCTATTGAATGGAGATCTGGATTCCAAAATACAAGCTGCCATTGACATC
AGGAACATTCTCAGGAACTCCTCCGTCAAGACTCGTTCCAAGTTCACGGCCGCCGCCGAC
GTTATCCAACCCCTCGTCTCCTTGCTCCTCTCTCCCAACCAACACGCTGCTGAAGTCTCT
CTTCTCGCTCTCCTCACTCTCGCCGCCAGGAACGAACGAAACAAAGTCAGGATAGTGACA
TCTGGGGCTGTTCCCCCTCTTGTTGAACTCCTCGAGTTCCAAAATGGTAGATTAAGGGAA
TTGGCGATTGCAGCAATCTTGACACTGTCTGCTGCTGCTCCCAACAAGCTGACCATTGCA
GCTTCTGGAGCTGCACCTCTTCTGGTTCAGATTCTCAGCTCTGGAAGTGTTCAAGGAAAA
GTTGATGCTGTCACAGCACTTCACTATCTGTCCAGCTGCACAGAGGCCACCACTCCAGTC
ATTGATGCTAGAGCTGTTTCCCCTCTCATAAAACTCCTCAAAGATTGCAAGAAGTATTCC
AAATTTGCTGAGAAGACTACAGCCCTACTTGAAATCCTTTCTAAATCCGAAGAAGGGCAA
ACTGCAATTTCAAACTCAGATGGTGGAATCTTAACCCTAGTCGAGACCATTGAAGATGGA
TCTCTGGTGAGCACAGAACATGCAGTTGGAGCTTTGCTTTCCTTATGCCAGAGCTGCAGA
AACAAATACAGGGAACTCATTCTAAAGGAAGGTGCAATTCCAGGCCTTTTACGACTCACT
GTGGAGGGCACCCCAGAAGCCCAGGAGAGAGCCCGGATGCTCCTGGACCTGCTCAGGGAT
TCCCCACCAGAAAAGAGGCTGGCCTCATCAGTTTTGGAGAGAATTGCGTATGACATTGCT
GCACGGGTTGATGGGTCGGATAAAGCTGCTGAAACTGCAAAGAGGTTACTGCAAGACATG
GTTCACAGAAGCATGGAGCTCAGCCTGGGCCGTATCCAGCGCAGGGCTGCATCTTGTACA
CCTTCACAGATTCCCCCCACATGA

Peptide Sequence

PEP ID

VIT_12s0057g01300.t01
PEP Infomation

pep chromosome:12X:12:10048685:10051304:1 gene:VIT_12s0057g01300 transcript:VIT_12s0057g01300.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGDSEEGEIWTQQKRTLIDGVAERLLNGDLDSKIQAAIDIRNILRNSSVKTRSKFTAAAD
VIQPLVSLLLSPNQHAAEVSLLALLTLAARNERNKVRIVTSGAVPPLVELLEFQNGRLRE
LAIAAILTLSAAAPNKLTIAASGAAPLLVQILSSGSVQGKVDAVTALHYLSSCTEATTPV
IDARAVSPLIKLLKDCKKYSKFAEKTTALLEILSKSEEGQTAISNSDGGILTLVETIEDG
SLVSTEHAVGALLSLCQSCRNKYRELILKEGAIPGLLRLTVEGTPEAQERARMLLDLLRD
SPPEKRLASSVLERIAYDIAARVDGSDKAAETAKRLLQDMVHRSMELSLGRIQRRAASCT
PSQIPPT

Transcript Sequence

Transcript ID

VIT_12s0057g01300.t01
Transcript Infomation

cdna chromosome:12X:12:10048685:10051304:1 gene:VIT_12s0057g01300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAAATTAGGTGTGATGATGGGCATGGTGGATGGACAAGATGAGAATTGAGAAGAGAATG
GGAGATTCTGAGGAGGGGGAGATATGGACGCAGCAGAAGCGAACCCTAATTGATGGAGTG
GCTGAGAGGCTATTGAATGGAGATCTGGATTCCAAAATACAAGCTGCCATTGACATCAGG
AACATTCTCAGGAACTCCTCCGTCAAGACTCGTTCCAAGTTCACGGCCGCCGCCGACGTT
ATCCAACCCCTCGTCTCCTTGCTCCTCTCTCCCAACCAACACGCTGCTGAAGTCTCTCTT
CTCGCTCTCCTCACTCTCGCCGCCAGGAACGAACGAAACAAAGTCAGGATAGTGACATCT
GGGGCTGTTCCCCCTCTTGTTGAACTCCTCGAGTTCCAAAATGGTAGATTAAGGGAATTG
GCGATTGCAGCAATCTTGACACTGTCTGCTGCTGCTCCCAACAAGCTGACCATTGCAGCT
TCTGGAGCTGCACCTCTTCTGGTTCAGATTCTCAGCTCTGGAAGTGTTCAAGGAAAAGTT
GATGCTGTCACAGCACTTCACTATCTGTCCAGCTGCACAGAGGCCACCACTCCAGTCATT
GATGCTAGAGCTGTTTCCCCTCTCATAAAACTCCTCAAAGATTGCAAGAAGTATTCCAAA
TTTGCTGAGAAGACTACAGCCCTACTTGAAATCCTTTCTAAATCCGAAGAAGGGCAAACT
GCAATTTCAAACTCAGATGGTGGAATCTTAACCCTAGTCGAGACCATTGAAGATGGATCT
CTGGTGAGCACAGAACATGCAGTTGGAGCTTTGCTTTCCTTATGCCAGAGCTGCAGAAAC
AAATACAGGGAACTCATTCTAAAGGAAGGTGCAATTCCAGGCCTTTTACGACTCACTGTG
GAGGGCACCCCAGAAGCCCAGGAGAGAGCCCGGATGCTCCTGGACCTGCTCAGGGATTCC
CCACCAGAAAAGAGGCTGGCCTCATCAGTTTTGGAGAGAATTGCGTATGACATTGCTGCA
CGGGTTGATGGGTCGGATAAAGCTGCTGAAACTGCAAAGAGGTTACTGCAAGACATGGTT
CACAGAAGCATGGAGCTCAGCCTGGGCCGTATCCAGCGCAGGGCTGCATCTTGTACACCT
TCACAGATTCCCCCCACATGAAGATAGTTAAAAAGAAGGCCTTGGGGAGTATTCATCTGG
TGCTAGATTAGCTAAATCACAATCCCAGAGAGTCGGAATGCACATATATAGTGAAGCAAT
GACATAGATTTTTGGTTTTTGGTGGGTGGAGGTGAAATCTACTAGCGGTTTTGTTTGTGA
TGCCCATATTGGGTGCTTTGTATATCTGAAGTTGGGTCATGTACATACAACAGATATGGT
GAACATCACTTTTTAAGGTTGTATTGTTGAACCA