Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0057g01250.t01
CDS Infomation

cds chromosome:12X:12:10000745:10005486:-1 gene:VIT_12s0057g01250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGAAGCTTGTAGAATGTTCCACACAGCTCTGACACTCACACTCCCTCCTTCTTTC
TCTCAAACCCCATCTCGTCACTCTCAGCCCATCCCCCGGAGACACCCAATTCGGTGCTCA
ATATCCACCACCGACACCGCCAAAACCTCCGTGACCCAGAAGATCCCCTGGGGCTGCGAG
GTGGATTCGTTGGAAAACGCAGCCTTGCTGCAGAAATGGTTGTCGGACTCGGGCCTCCCG
CCCCAGAAAATGGGTATTGAAAGAGTTGAAGTCGGGGAGAGGGGGTTAGTTGCTCTCAAG
AACATCAGGAAGGGGGAGAAACTGCTCTTTGTGCCTCCCTCACTCGTCATTACTGCAGAC
TCGGAGTGGAGCTGCACAGAGGCTGGTGAAGTGTTGAAACGGAATTCAGTACCAGATTGG
CCATTGCTGGCAACCTACCTCATTGGTGAAGCAAGCTTTATGCAATCTTCAAGATGGAGC
AATTATATCTCTGCCTTGCCTCGACAGCCCTATTCACTTCTGTACTGGACACGTGCTGAA
CTAGATAAGTATTTAGAAGCCTCGCAGATAAGAGAGCGTGCAATTGAAAGGATTAATGAT
GTTACTGGAACATACAATGATTTAAGGCTCAGGATATTTTCCAAGCATCCCCATTTATTT
CCTGAAGAGGTATTCAATATGGAGACTTTCAAATGGTCATTTGGCATTCTTTTCTCACGA
TTGGTTCGTTTGCCCTCAATGGATGAAAAGATTGCCTTGGTTCCCTGGGCAGATATGCTG
AATCATAGTTGTGAGGTTGAAACTTTTTTGGATTATGACAAATCATCACAGGGAGTTGTC
TTTACAACTGACCGGACATATCAGCCAAGTGAGCAGGTTTTTATATCATATGGCAAGAAA
TCTAATGGAGAGTTGTTGCTATCATATGGATTTGTTCCAAGGGAAGGCACCAACCCTAAT
GATAAAGTTGAGTTGCTGTTGTCACTTAAGAAATCTGATAAATGTTATAAGGAGAAGTCG
GAAGCTATGAAGAAGCATGGATTGTCAACATCTCAATGTTTCCCTATACAAATCACTGGT
TGGCCTTTGGAGTTAATGGCCTATGCTTATTTAGTAGTCAGCCCCCCAAGTATGAGCCAA
CATTTTGAAGAGATTGCTGCTGTGGCATCAAATAAAACTACATCCAAAAAGGATATCAGA
TATCCTGAACTAGAGGAACAAGCACTGCAATTTATACTGGATAGTTGTGAAGCAAGCATA
TCAAAGTACAGCAAGTTCCTGCAGGAAAGTGGGTCTATGGATTTGGATGTAACATCTCCA
AAGCAGCTAAACAGAAGAGTGTTTTTAAAACAGCTAGCTGTAGATTTGTGTACCAGTGAG
CGGAGGATACTATTCCGCACCCAATATATACTCAGGAGGAGATTAAGAGACATAAGAAGC
GGTGAACTGAGAGCTCTCAGAATCTTCGATGGCTTCAGGAAGCTCTTCAAATGA

Peptide Sequence

PEP ID

VIT_12s0057g01250.t01
PEP Infomation

pep chromosome:12X:12:10000745:10005486:-1 gene:VIT_12s0057g01250 transcript:VIT_12s0057g01250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAEACRMFHTALTLTLPPSFSQTPSRHSQPIPRRHPIRCSISTTDTAKTSVTQKIPWGCE
VDSLENAALLQKWLSDSGLPPQKMGIERVEVGERGLVALKNIRKGEKLLFVPPSLVITAD
SEWSCTEAGEVLKRNSVPDWPLLATYLIGEASFMQSSRWSNYISALPRQPYSLLYWTRAE
LDKYLEASQIRERAIERINDVTGTYNDLRLRIFSKHPHLFPEEVFNMETFKWSFGILFSR
LVRLPSMDEKIALVPWADMLNHSCEVETFLDYDKSSQGVVFTTDRTYQPSEQVFISYGKK
SNGELLLSYGFVPREGTNPNDKVELLLSLKKSDKCYKEKSEAMKKHGLSTSQCFPIQITG
WPLELMAYAYLVVSPPSMSQHFEEIAAVASNKTTSKKDIRYPELEEQALQFILDSCEASI
SKYSKFLQESGSMDLDVTSPKQLNRRVFLKQLAVDLCTSERRILFRTQYILRRRLRDIRS
GELRALRIFDGFRKLFK

Transcript Sequence

Transcript ID

VIT_12s0057g01250.t01
Transcript Infomation

cdna chromosome:12X:12:10000745:10005486:-1 gene:VIT_12s0057g01250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGAAGCTTGTAGAATGTTCCACACAGCTCTGACACTCACACTCCCTCCTTCTTTC
TCTCAAACCCCATCTCGTCACTCTCAGCCCATCCCCCGGAGACACCCAATTCGGTGCTCA
ATATCCACCACCGACACCGCCAAAACCTCCGTGACCCAGAAGATCCCCTGGGGCTGCGAG
GTGGATTCGTTGGAAAACGCAGCCTTGCTGCAGAAATGGTTGTCGGACTCGGGCCTCCCG
CCCCAGAAAATGGGTATTGAAAGAGTTGAAGTCGGGGAGAGGGGGTTAGTTGCTCTCAAG
AACATCAGGAAGGGGGAGAAACTGCTCTTTGTGCCTCCCTCACTCGTCATTACTGCAGAC
TCGGAGTGGAGCTGCACAGAGGCTGGTGAAGTGTTGAAACGGAATTCAGTACCAGATTGG
CCATTGCTGGCAACCTACCTCATTGGTGAAGCAAGCTTTATGCAATCTTCAAGATGGAGC
AATTATATCTCTGCCTTGCCTCGACAGCCCTATTCACTTCTGTACTGGACACGTGCTGAA
CTAGATAAGTATTTAGAAGCCTCGCAGATAAGAGAGCGTGCAATTGAAAGGATTAATGAT
GTTACTGGAACATACAATGATTTAAGGCTCAGGATATTTTCCAAGCATCCCCATTTATTT
CCTGAAGAGGTATTCAATATGGAGACTTTCAAATGGTCATTTGGCATTCTTTTCTCACGA
TTGGTTCGTTTGCCCTCAATGGATGAAAAGATTGCCTTGGTTCCCTGGGCAGATATGCTG
AATCATAGTTGTGAGGTTGAAACTTTTTTGGATTATGACAAATCATCACAGGGAGTTGTC
TTTACAACTGACCGGACATATCAGCCAAGTGAGCAGGTTTTTATATCATATGGCAAGAAA
TCTAATGGAGAGTTGTTGCTATCATATGGATTTGTTCCAAGGGAAGGCACCAACCCTAAT
GATAAAGTTGAGTTGCTGTTGTCACTTAAGAAATCTGATAAATGTTATAAGGAGAAGTCG
GAAGCTATGAAGAAGCATGGATTGTCAACATCTCAATGTTTCCCTATACAAATCACTGGT
TGGCCTTTGGAGTTAATGGCCTATGCTTATTTAGTAGTCAGCCCCCCAAGTATGAGCCAA
CATTTTGAAGAGATTGCTGCTGTGGCATCAAATAAAACTACATCCAAAAAGGATATCAGA
TATCCTGAACTAGAGGAACAAGCACTGCAATTTATACTGGATAGTTGTGAAGCAAGCATA
TCAAAGTACAGCAAGTTCCTGCAGGAAAGTGGGTCTATGGATTTGGATGTAACATCTCCA
AAGCAGCTAAACAGAAGAGTGTTTTTAAAACAGCTAGCTGTAGATTTGTGTACCAGTGAG
CGGAGGATACTATTCCGCACCCAATATATACTCAGGAGGAGATTAAGAGACATAAGAAGC
GGTGAACTGAGAGCTCTCAGAATCTTCGATGGCTTCAGGAAGCTCTTCAAATGAGTCTTT
CAGGGTCTCGGACAACAAAACCCTCTTGTAATTCCCACGAAGGAACTTGGATCTGTGAAA
GCTAATTCAATAGAAATGTTTTCCTGTTCTTAACATTACATAAAAACAGAGGATAACAGA
AGATGAATAAAGCTGTTGTTCCACTAACTGAAGAAACTTCTCC