Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0057g01240.t01
CDS Infomation

cds chromosome:12X:12:9995964:10000330:-1 gene:VIT_12s0057g01240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGTGCAGAAAAGCAAGAAACTTTCTGTTGCCTGTGTTCGTGCTCAGCAGTCTGAA
TCCAAGGATGGATCCGCCACGGTTTCCCCACTGAGTGATTCACAGGAAAATGCTCTCAAA
ATTAAGGAGTGGGAAGTGGGGAGGTTCCAAGATGAAATAGCAGCTACCCAGGGTATAAGA
ATCAGGAGAAGACCACCAACTGGTCCACCATTGCATTATGTGGGCCCTTTTGAGTTTCGG
TTACAGAATGAGGGTAACACTCCTCGTAACATTTTGGAAGAAATTGTATGGAACAAGGAC
AAGGAAGTCTCACAGTTGAAAGAGAGAAAGCCTCTCGGTATGCTGAAGAAAGCTCTTGAG
AATGCCCCTCCCAATAGAGATTTCATTGCGGCTCTTAGGGCTTCCAATCTCCGGACTGGG
TTTCCTGGTTTAATTGCTGAAGTGAAAAAGGCTTCTCCAAGCAGAGGAATCCTGAGAGAG
GATTTTGATCCGGTTGAAATTGCCCGAGCCTATGAGAAAGGTGGAGCAGCTTGTCTTAGT
GTTTTGACTGATGAGAAGTATTTTAAGGGAAGCTTTGAAAATCTGGAGTTGATACGAAAT
GCCGGAGTAAAGTGCCCTCTGCTGTGCAAAGAATTTGTCGTAGATGCATGGCAAATCTAC
TATGCTCGAACCAAAGGGGCAGATGCAATTCTTCTAATTGCTGCTGTTTTACCTGATCTT
GACATCAGATACATGACTAAGATTTGCAAGATGCTTGGGTTGGCAGCACTTGTTGAGGTA
CATGATGAGAGAGAAATGGATCGTGTTCTTGGAATAGAAGGGATTGAACTTATTGGCATC
AATAACCGTAACCTTGCAACATTTGAGGTTGATATTAGCAACACAAAGAAGCTTCTTGAA
GGAGAACGTGGTGAAATAATCCGTCAAAAAGATATAATTGTTGTCGGGGAGTCTGGGCTG
TTCACTCCTGCTGATGTTGCTTATGTACAAGAAGCTGGTGTTAAAGCAATTTTGGTCGGG
GAATCAATTGTCAAACAGAAGGACCCCAGGAGTGGCATAACTGGACTTTTCGGTAAAGAT
ATCTCTGTATGA

Peptide Sequence

PEP ID

VIT_12s0057g01240.t01
PEP Infomation

pep chromosome:12X:12:9995964:10000330:-1 gene:VIT_12s0057g01240 transcript:VIT_12s0057g01240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEVQKSKKLSVACVRAQQSESKDGSATVSPLSDSQENALKIKEWEVGRFQDEIAATQGIR
IRRRPPTGPPLHYVGPFEFRLQNEGNTPRNILEEIVWNKDKEVSQLKERKPLGMLKKALE
NAPPNRDFIAALRASNLRTGFPGLIAEVKKASPSRGILREDFDPVEIARAYEKGGAACLS
VLTDEKYFKGSFENLELIRNAGVKCPLLCKEFVVDAWQIYYARTKGADAILLIAAVLPDL
DIRYMTKICKMLGLAALVEVHDEREMDRVLGIEGIELIGINNRNLATFEVDISNTKKLLE
GERGEIIRQKDIIVVGESGLFTPADVAYVQEAGVKAILVGESIVKQKDPRSGITGLFGKD
ISV

Transcript Sequence

Transcript ID

VIT_12s0057g01240.t01
Transcript Infomation

cdna chromosome:12X:12:9995964:10000330:-1 gene:VIT_12s0057g01240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATAATCTCTCCTATATTTTTTTGAAAATAATGAAATTCCTGGGTGGGCTGTATTTAAGT
AAATATCAAATCATACCTGACCAACCCAACGGACAGCTGTTCACCGTTCCTTAAATAACA
GTCCAATCCCCTTTCAGTCGCCATTTTTATTTTCTGGGTTTCTATTCTTCACTGGAATAA
GAATTGGAAGCAAATGGAGGGGTTGTTTTCATTGAGAGCAACGCCTAGGGTTTTGGTTCC
GACCGTTTCGGCTCCAAATCACAAACCCAAGTTCTCGATTTCAGGGACTCGTATGGAAGT
GCAGAAAAGCAAGAAACTTTCTGTTGCCTGTGTTCGTGCTCAGCAGTCTGAATCCAAGGA
TGGATCCGCCACGGTTTCCCCACTGAGTGATTCACAGGAAAATGCTCTCAAAATTAAGGA
GTGGGAAGTGGGGAGGTTCCAAGATGAAATAGCAGCTACCCAGGGTATAAGAATCAGGAG
AAGACCACCAACTGGTCCACCATTGCATTATGTGGGCCCTTTTGAGTTTCGGTTACAGAA
TGAGGGTAACACTCCTCGTAACATTTTGGAAGAAATTGTATGGAACAAGGACAAGGAAGT
CTCACAGTTGAAAGAGAGAAAGCCTCTCGGTATGCTGAAGAAAGCTCTTGAGAATGCCCC
TCCCAATAGAGATTTCATTGCGGCTCTTAGGGCTTCCAATCTCCGGACTGGGTTTCCTGG
TTTAATTGCTGAAGTGAAAAAGGCTTCTCCAAGCAGAGGAATCCTGAGAGAGGATTTTGA
TCCGGTTGAAATTGCCCGAGCCTATGAGAAAGGTGGAGCAGCTTGTCTTAGTGTTTTGAC
TGATGAGAAGTATTTTAAGGGAAGCTTTGAAAATCTGGAGTTGATACGAAATGCCGGAGT
AAAGTGCCCTCTGCTGTGCAAAGAATTTGTCGTAGATGCATGGCAAATCTACTATGCTCG
AACCAAAGGGGCAGATGCAATTCTTCTAATTGCTGCTGTTTTACCTGATCTTGACATCAG
ATACATGACTAAGATTTGCAAGATGCTTGGGTTGGCAGCACTTGTTGAGGTACATGATGA
GAGAGAAATGGATCGTGTTCTTGGAATAGAAGGGATTGAACTTATTGGCATCAATAACCG
TAACCTTGCAACATTTGAGGTTGATATTAGCAACACAAAGAAGCTTCTTGAAGGAGAACG
TGGTGAAATAATCCGTCAAAAAGATATAATTGTTGTCGGGGAGTCTGGGCTGTTCACTCC
TGCTGATGTTGCTTATGTACAAGAAGCTGGTGTTAAAGCAATTTTGGTCGGGGAATCAAT
TGTCAAACAGAAGGACCCCAGGAGTGGCATAACTGGACTTTTCGGTAAAGATATCTCTGT
ATGAGTTCAAGAGAGCCTCCTTGTTGTAACTGGCAGCAGATGAAGTTAACTATTATCACA
GCCATATGATCCTCCTTCCCTTAACTCCTTTTTGAGTTTATTATACAGTAAGGTTTTGTG
TCCAAACCTGCATTGGAGTGGATCACTGTATTCAATAAAATTCTTAAGCATGAATATGTT
GAGTGGATAA