Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0057g01160.t01
CDS Infomation

cds chromosome:12X:12:9898799:9904281:1 gene:VIT_12s0057g01160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTTCCCACGAGTGAGATAGCGAAAAACAGAACCCCGCCCACCAAAAAAGTAGAAATA
GTGAATGGCTCAAGCCGGGTTGTTAATGGAGCAAGCATAGTGAAGAGAGATACTGCAACT
GCCCTGGTTAAGGCACAAAAAAGTAAAGAATCTAGAGATCTCCCACCAATGGAGGAGCTA
AAGGTTCTGCCCTCTGATGAAGGTTTCAGCTGGGCCAATGAAAATTATAATTCCTGGCAG
AGGTCTATAGATGTTTGGTCCTTTGTTATTTCTCTACGTCTTCGCATTCTGTTGGACAAT
GCAAAATGGGCATATTTAGGAGGTTTTACAGAAGATAAGCAGAAAAACAGAAGCCGTAAA
ACTGCCTCATGGTTGCGGGAACGCGTTCTGCAACTTGGTCCAACTTTTATCAAATTTGGG
CAGTTATCCTCAACAAGGTCAGATCTGTTTCCAAGAGAGTTTGTGGATGAGCTTGCCAAG
TTGCAGGATAGGGTACCTGCTTTTTCATCAAAAAAAGCAAGAGACTTAATTGAGAGTGAA
CTGGGAGCTTCAATTGAAATATTGTTCAAGGAGTTTGAAGACCAGCCAATTGCTGCAGCT
AGTCTTGGTCAGGTGCATCGGGCTGTCCTACATAATGGAGAGAAAGTTGTTGTGAAAGTT
CAGAGGCCTGGTCTCAAGAAACTTTTTGACATCGACCTACGAAATTTAAAGCTAATTGCA
GAGTATTTTCAGAGAAGTGAAACCTTTAGTGGAGCAACAAGAGATTGGATTGGTATATAT
GAAGAATGTGCTACGCTTTTGTATCAAGAAATTGATTATATGAATGAAGGGAAGAATGCT
GATAGATTCCGCAGGGATTTTCGAAATGTAAAGTGGGTTCGAGTACCTCTGGTGTTTTGG
GATTATACTGCCACAAAGGTATTGACCTTGGAGTATGTTCCAGGCATTAAGATAAATCGG
CGGGATATGCTAGATGCACAGGGTTTTAATCGTTCTCGTATTTCATCACACGCTATTGAA
GCATACTTAATTCAGATACTAAAAATGGGTTTCTTTCATGCTGATCCTCATCCTGGAAAC
CTTGCCATTGATGTGGATGAAACGATTATCTACTATGACTTTGGTATGATGGGAGAAATC
AAATCTTTCACACAGGAGAGATTGCTTGAACTTTTCTATGCAATTTATGAAAAAGATGCA
AAAAAGGTTATGCAAAGTCTTACAGATCTTGAAGCACTGCAACCCACAGGAGACTTGTCA
TCAGTGAGGAGATCAGTGCAATTTTTCTTGGACAATTTGTTAAGTCAGACGCCAGATCAG
CCGCAGACTTTAGCTGCAATTGGTGAGGATTTGTTTGCTATAGCCACAGATCAGCCAATC
CGTTTTCCATCTACCATCACCTTTGTTCTAAAGGCATTTTCAACACTGGAAGGAATTGGC
TACTCACTTGATCCAGATTTTTCCTTTGTGAAGATTGCTGCACCTTATGCACAGGAGCTT
TTAGATATACGACAGCAGCAGCGAACTGGACCACAATTTGTGCAGGAGATAAGGAAACAA
GCAGACGATGCCAGAACCTACACCATGTCCATGCCATACAGTGTCCAGAGGATAGAAGAA
TTTGTGAAACAACTTGAATCAGGAGACCTGAAACTTCGAGTTCGAGTACTTGAGTCTGAA
AGAGCAGCTCGGAAGGCAACCATACTACAGATGGCTACCATGTACACAGTTTTAGGAGGT
ACCCTGCTAAGCCTTGGCGTCACATTAAGCAATCAAGGCAGTCAAGTTATCGCAAATGGT
TCGTATGTTGGTGCAGGTGTTTTCTTGGTATTGTTTATTAGGTCCATGCAAAGGGTGAAA
AGGCTAGATAAATTTGAGAAGATGATATGA

Peptide Sequence

PEP ID

VIT_12s0057g01160.t01
PEP Infomation

pep chromosome:12X:12:9898799:9904281:1 gene:VIT_12s0057g01160 transcript:VIT_12s0057g01160.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVPTSEIAKNRTPPTKKVEIVNGSSRVVNGASIVKRDTATALVKAQKSKESRDLPPMEEL
KVLPSDEGFSWANENYNSWQRSIDVWSFVISLRLRILLDNAKWAYLGGFTEDKQKNRSRK
TASWLRERVLQLGPTFIKFGQLSSTRSDLFPREFVDELAKLQDRVPAFSSKKARDLIESE
LGASIEILFKEFEDQPIAAASLGQVHRAVLHNGEKVVVKVQRPGLKKLFDIDLRNLKLIA
EYFQRSETFSGATRDWIGIYEECATLLYQEIDYMNEGKNADRFRRDFRNVKWVRVPLVFW
DYTATKVLTLEYVPGIKINRRDMLDAQGFNRSRISSHAIEAYLIQILKMGFFHADPHPGN
LAIDVDETIIYYDFGMMGEIKSFTQERLLELFYAIYEKDAKKVMQSLTDLEALQPTGDLS
SVRRSVQFFLDNLLSQTPDQPQTLAAIGEDLFAIATDQPIRFPSTITFVLKAFSTLEGIG
YSLDPDFSFVKIAAPYAQELLDIRQQQRTGPQFVQEIRKQADDARTYTMSMPYSVQRIEE
FVKQLESGDLKLRVRVLESERAARKATILQMATMYTVLGGTLLSLGVTLSNQGSQVIANG
SYVGAGVFLVLFIRSMQRVKRLDKFEKMI

Transcript Sequence

Transcript ID

VIT_12s0057g01160.t01
Transcript Infomation

cdna chromosome:12X:12:9898799:9904281:1 gene:VIT_12s0057g01160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TAGATGGCGGCAATACTGGCTTCACACAGCTGCTATTGCCGCAATGTGGAGTTGATGAAT
CAAGGAAGAGCAGTAGAGAATCTCGGTTTCTCAAGCTCAATTTCTTCTCAGAATTTCTCA
AAGTTTGAGAGGCCCACATGTCATCTGCCTATGGCTGATAAATCCTTTAGATTTCAAGTA
GAGATGCGAAAGAGTGAATCTCCCGTGAGCTTAGGTACAAATGGACGAGCTACTAAAATG
GTTCCCACGAGTGAGATAGCGAAAAACAGAACCCCGCCCACCAAAAAAGTAGAAATAGTG
AATGGCTCAAGCCGGGTTGTTAATGGAGCAAGCATAGTGAAGAGAGATACTGCAACTGCC
CTGGTTAAGGCACAAAAAAGTAAAGAATCTAGAGATCTCCCACCAATGGAGGAGCTAAAG
GTTCTGCCCTCTGATGAAGGTTTCAGCTGGGCCAATGAAAATTATAATTCCTGGCAGAGG
TCTATAGATGTTTGGTCCTTTGTTATTTCTCTACGTCTTCGCATTCTGTTGGACAATGCA
AAATGGGCATATTTAGGAGGTTTTACAGAAGATAAGCAGAAAAACAGAAGCCGTAAAACT
GCCTCATGGTTGCGGGAACGCGTTCTGCAACTTGGTCCAACTTTTATCAAATTTGGGCAG
TTATCCTCAACAAGGTCAGATCTGTTTCCAAGAGAGTTTGTGGATGAGCTTGCCAAGTTG
CAGGATAGGGTACCTGCTTTTTCATCAAAAAAAGCAAGAGACTTAATTGAGAGTGAACTG
GGAGCTTCAATTGAAATATTGTTCAAGGAGTTTGAAGACCAGCCAATTGCTGCAGCTAGT
CTTGGTCAGGTGCATCGGGCTGTCCTACATAATGGAGAGAAAGTTGTTGTGAAAGTTCAG
AGGCCTGGTCTCAAGAAACTTTTTGACATCGACCTACGAAATTTAAAGCTAATTGCAGAG
TATTTTCAGAGAAGTGAAACCTTTAGTGGAGCAACAAGAGATTGGATTGGTATATATGAA
GAATGTGCTACGCTTTTGTATCAAGAAATTGATTATATGAATGAAGGGAAGAATGCTGAT
AGATTCCGCAGGGATTTTCGAAATGTAAAGTGGGTTCGAGTACCTCTGGTGTTTTGGGAT
TATACTGCCACAAAGGTATTGACCTTGGAGTATGTTCCAGGCATTAAGATAAATCGGCGG
GATATGCTAGATGCACAGGGTTTTAATCGTTCTCGTATTTCATCACACGCTATTGAAGCA
TACTTAATTCAGATACTAAAAATGGGTTTCTTTCATGCTGATCCTCATCCTGGAAACCTT
GCCATTGATGTGGATGAAACGATTATCTACTATGACTTTGGTATGATGGGAGAAATCAAA
TCTTTCACACAGGAGAGATTGCTTGAACTTTTCTATGCAATTTATGAAAAAGATGCAAAA
AAGGTTATGCAAAGTCTTACAGATCTTGAAGCACTGCAACCCACAGGAGACTTGTCATCA
GTGAGGAGATCAGTGCAATTTTTCTTGGACAATTTGTTAAGTCAGACGCCAGATCAGCCG
CAGACTTTAGCTGCAATTGGTGAGGATTTGTTTGCTATAGCCACAGATCAGCCAATCCGT
TTTCCATCTACCATCACCTTTGTTCTAAAGGCATTTTCAACACTGGAAGGAATTGGCTAC
TCACTTGATCCAGATTTTTCCTTTGTGAAGATTGCTGCACCTTATGCACAGGAGCTTTTA
GATATACGACAGCAGCAGCGAACTGGACCACAATTTGTGCAGGAGATAAGGAAACAAGCA
GACGATGCCAGAACCTACACCATGTCCATGCCATACAGTGTCCAGAGGATAGAAGAATTT
GTGAAACAACTTGAATCAGGAGACCTGAAACTTCGAGTTCGAGTACTTGAGTCTGAAAGA
GCAGCTCGGAAGGCAACCATACTACAGATGGCTACCATGTACACAGTTTTAGGAGGTACC
CTGCTAAGCCTTGGCGTCACATTAAGCAATCAAGGCAGTCAAGTTATCGCAAATGGTTCG
TATGTTGGTGCAGGTGTTTTCTTGGTATTGTTTATTAGGTCCATGCAAAGGGTGAAAAGG
CTAGATAAATTTGAGAAGATGATATGATTTTCAAT