Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0057g01100.t01
CDS Infomation

cds chromosome:12X:12:9770897:9776203:-1 gene:VIT_12s0057g01100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCACCGTTTTGCAAGCAGAAGCCTCTACGCTTACCTCTCTGCAACTAAAAGATGTATT
CCTTCTTCTACTATTTCACACCCAACAGCTCATAAGACAAATACCACTCTCTCCCCCTCC
AAAGGTGTCAAGCCTAGAGCTGTGATTCCATCCTTAACCAGAATCATGGTGGGTTCAACT
AGTTCAGTGTTGGTTGATGAAAATAGTGTCCAGCAAATTCAGTTACTCACTTCTACCGAT
GATGCCTATGGAGGAGTTCGTGTAGAAATAAAGAATCCTATGGATTCTAATGTCTTTGGT
GATTTGCTTAGAGCTTCAATATCACAATGGAGGCAAAAGGGGAAGAAGGGTGTGTGGATT
AAACTGCCTATTGAACATGCAAATCTTATTGAAGCTGCAGTTAAGGAAGGCTTTCGGTAC
CATCATGCTGAACCAGACTACTTGATGCTTGTATATTGGATTCCCAAAACTGCTCATACT
CTGCCTGCAAATGCTTCACATCGAGTGGGCATTGGTGCCTTTGTCATCAATAGTAAAAGA
GAGGTTCTCGTTGTTCAGGAAAATAGTGGCGGATTCAAGGATACAGGTGTGTGGAAGTTT
CCTACTGGGGTTGTCAATGAGGGTGAGGATATCTGTACAGCTGCTATTAGAGAAGTCGAG
GAAGAGACTGGGATTAAGACAGAATTTGTGGAAATTTTAGCATTCAGGCAAAGCCATAGG
TCATTCTTTACCAAGTCGGATTTGTTTTTTGTTTGCATGCTGCAACCACTATCCTCTGAG
ATTCAGAAGCAATATGAAGAAATTGAGGCAGCCCAGTGGATGCCAGTTGAGGAATATGCA
GCTCAACCTTTTGTGAAGAAAAATCCACAATTCGATAGCGTTGCCAACATATGCTTAGCG
AAGATAGATGTGAAGTACACTGGGTTGTCTCCATTTTCTGCCACTTCAAGCTCTGGTAAA
CACAACATCTTGTACTTCAACAATCAGGATCTAAAGCAGCCCCTGTCTTCTATAAGTCAG
GCCTAG

Peptide Sequence

PEP ID

VIT_12s0057g01100.t01
PEP Infomation

pep chromosome:12X:12:9770897:9776203:-1 gene:VIT_12s0057g01100 transcript:VIT_12s0057g01100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MHRFASRSLYAYLSATKRCIPSSTISHPTAHKTNTTLSPSKGVKPRAVIPSLTRIMVGST
SSVLVDENSVQQIQLLTSTDDAYGGVRVEIKNPMDSNVFGDLLRASISQWRQKGKKGVWI
KLPIEHANLIEAAVKEGFRYHHAEPDYLMLVYWIPKTAHTLPANASHRVGIGAFVINSKR
EVLVVQENSGGFKDTGVWKFPTGVVNEGEDICTAAIREVEEETGIKTEFVEILAFRQSHR
SFFTKSDLFFVCMLQPLSSEIQKQYEEIEAAQWMPVEEYAAQPFVKKNPQFDSVANICLA
KIDVKYTGLSPFSATSSSGKHNILYFNNQDLKQPLSSISQA

Transcript Sequence

Transcript ID

VIT_12s0057g01100.t01
Transcript Infomation

cdna chromosome:12X:12:9770897:9776203:-1 gene:VIT_12s0057g01100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGATGAAGTCCATGAAAGTTGCAAATACTCGTCCTCCCATATATATAAATAATTGGTTTG
TTCCCCGACGGGTAAGATTCAATTTCCTCTTCCTTTTCCTCTTAGTTTTAGGGAAGCCCG
GATCTGAAGGTTTTGAAACCCTGGACAACACGCTAAGGCAAGTATGTATAACGATATGAG
GATGATGTTAAGGGCATGAATCATAAGATTGGTTGGTTGGAAAGCACATGCACCGTTTTG
CAAGCAGAAGCCTCTACGCTTACCTCTCTGCAACTAAAAGATGTATTCCTTCTTCTACTA
TTTCACACCCAACAGCTCATAAGACAAATACCACTCTCTCCCCCTCCAAAGGTGTCAAGC
CTAGAGCTGTGATTCCATCCTTAACCAGAATCATGGTGGGTTCAACTAGTTCAGTGTTGG
TTGATGAAAATAGTGTCCAGCAAATTCAGTTACTCACTTCTACCGATGATGCCTATGGAG
GAGTTCGTGTAGAAATAAAGAATCCTATGGATTCTAATGTCTTTGGTGATTTGCTTAGAG
CTTCAATATCACAATGGAGGCAAAAGGGGAAGAAGGGTGTGTGGATTAAACTGCCTATTG
AACATGCAAATCTTATTGAAGCTGCAGTTAAGGAAGGCTTTCGGTACCATCATGCTGAAC
CAGACTACTTGATGCTTGTATATTGGATTCCCAAAACTGCTCATACTCTGCCTGCAAATG
CTTCACATCGAGTGGGCATTGGTGCCTTTGTCATCAATAGTAAAAGAGAGGTTCTCGTTG
TTCAGGAAAATAGTGGCGGATTCAAGGATACAGGTGTGTGGAAGTTTCCTACTGGGGTTG
TCAATGAGGGTGAGGATATCTGTACAGCTGCTATTAGAGAAGTCGAGGAAGAGACTGGGA
TTAAGACAGAATTTGTGGAAATTTTAGCATTCAGGCAAAGCCATAGGTCATTCTTTACCA
AGTCGGATTTGTTTTTTGTTTGCATGCTGCAACCACTATCCTCTGAGATTCAGAAGCAAT
ATGAAGAAATTGAGGCAGCCCAGTGGATGCCAGTTGAGGAATATGCAGCTCAACCTTTTG
TGAAGAAAAATCCACAATTCGATAGCGTTGCCAACATATGCTTAGCGAAGATAGATGTGA
AGTACACTGGGTTGTCTCCATTTTCTGCCACTTCAAGCTCTGGTAAACACAACATCTTGT
ACTTCAACAATCAGGATCTAAAGCAGCCCCTGTCTTCTATAAGTCAGGCCTAGAAAGCAT
ACTTGCTTGCCTTGTATGCTCAATATACCTGTTGTAGTGTGACCAAATAAGATAGCATAC
TTGCTAGCCTAGTATGCTCAATAAATTTGCTGTAGTGTGAGGTTTTTTAGTAGAACCAAG
TTACTTGTATATGTATGTTTTACTAGATGTTCTATTTGTCAATTCTCAGGATCCATTGTT
CAAATCTAAAAGCCTTGAAATTGAACA