Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0057g01080.t01
CDS Infomation

cds chromosome:12X:12:9757637:9759130:-1 gene:VIT_12s0057g01080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCAGCCCAAGGGCAATTGGATTAAGCTTGACCAGAATGGAACTGGGCCTGGAGCA
CGAAGTTCCCATGCTATAGCCATAGTAGGACAGAAGGCTTATGTTTTCGGCGGCGAGCTC
ACGCCACGTGTCCCTGTCGACAACGACATCCACGTCTTTGACCTACAGGATCTGACGTGG
TCCGTCGCAACCGTCACCGGCGACGTCCCTCCGCCACGTATCGGCGTTGGAATGGCGGCA
GTCGGTGGGACCATCTACGTCTTCGGTGGCAGGGACGGCACACACAAGGAACTCAACGAG
CTCTACTCTTTTGACACATTTAGCAACAAGTGGACCCTACTCTCCAGTGGCGACGCCGGA
CCTCCCCATCGGAGCTACCACTCGATCGCCGCCGACCAGCGCCGGGTCTACGTGTTTGGT
GGCTGCGGCGTCGCCGGCCGCCTCAACGATCTATGGGCCTTTGATGTTGTTGAGAAGGTT
TGGATCAAATTTCCAGGCCCAGGTGAGGCCTGCAAGGGAAGAGGTGGGCTGGGCCTGGCA
GTGGCCGAAGGAAAAATTTGGGTTGTGTACGGGTTCTCCGGAGAGGAGACGGACGACGTC
CATTGTTTTGACTTGGCCCATGAAAAGTGGGCCCAAGTGGACACCAAGGGTGAAAAGCCC
AGCCCAAGAAGTGTGTTTTCGTCCCTTGTAATTGGAAAATACATATTCATATATGGTGGC
GAAGTAGACCCTAGTGATCAAGGTCACCTCGGTGCCGGAAAATTTTCCGGTGAGGTTTAT
GCATTGGACACTCATAATTTAGTGTGGAAAAAATGGGCCGACACCGATGATAACCATCCT
GGGCCACGGGGATGGTGTGCATTTTCTGCTGGACGATTGCATGACAAGGAGGGACTATTG
GTATATGGTGGTAACTCGCCTAGTAACGATCGGCTCGATGACATTTTCTTTTTGAGTCCT
TGTTTGGATGTGAATGAAAAATAA

Peptide Sequence

PEP ID

VIT_12s0057g01080.t01
PEP Infomation

pep chromosome:12X:12:9757637:9759130:-1 gene:VIT_12s0057g01080 transcript:VIT_12s0057g01080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDQPKGNWIKLDQNGTGPGARSSHAIAIVGQKAYVFGGELTPRVPVDNDIHVFDLQDLTW
SVATVTGDVPPPRIGVGMAAVGGTIYVFGGRDGTHKELNELYSFDTFSNKWTLLSSGDAG
PPHRSYHSIAADQRRVYVFGGCGVAGRLNDLWAFDVVEKVWIKFPGPGEACKGRGGLGLA
VAEGKIWVVYGFSGEETDDVHCFDLAHEKWAQVDTKGEKPSPRSVFSSLVIGKYIFIYGG
EVDPSDQGHLGAGKFSGEVYALDTHNLVWKKWADTDDNHPGPRGWCAFSAGRLHDKEGLL
VYGGNSPSNDRLDDIFFLSPCLDVNEK

Transcript Sequence

Transcript ID

VIT_12s0057g01080.t01
Transcript Infomation

cdna chromosome:12X:12:9757637:9759130:-1 gene:VIT_12s0057g01080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACACATACTGAGAGCCTCTCTGCAGAATCACTAATCCTCCCGGCTATGGATCAGCCCAAG
GGCAATTGGATTAAGCTTGACCAGAATGGAACTGGGCCTGGAGCACGAAGTTCCCATGCT
ATAGCCATAGTAGGACAGAAGGCTTATGTTTTCGGCGGCGAGCTCACGCCACGTGTCCCT
GTCGACAACGACATCCACGTCTTTGACCTACAGGATCTGACGTGGTCCGTCGCAACCGTC
ACCGGCGACGTCCCTCCGCCACGTATCGGCGTTGGAATGGCGGCAGTCGGTGGGACCATC
TACGTCTTCGGTGGCAGGGACGGCACACACAAGGAACTCAACGAGCTCTACTCTTTTGAC
ACATTTAGCAACAAGTGGACCCTACTCTCCAGTGGCGACGCCGGACCTCCCCATCGGAGC
TACCACTCGATCGCCGCCGACCAGCGCCGGGTCTACGTGTTTGGTGGCTGCGGCGTCGCC
GGCCGCCTCAACGATCTATGGGCCTTTGATGTTGTTGAGAAGGTTTGGATCAAATTTCCA
GGCCCAGGTGAGGCCTGCAAGGGAAGAGGTGGGCTGGGCCTGGCAGTGGCCGAAGGAAAA
ATTTGGGTTGTGTACGGGTTCTCCGGAGAGGAGACGGACGACGTCCATTGTTTTGACTTG
GCCCATGAAAAGTGGGCCCAAGTGGACACCAAGGGTGAAAAGCCCAGCCCAAGAAGTGTG
TTTTCGTCCCTTGTAATTGGAAAATACATATTCATATATGGTGGCGAAGTAGACCCTAGT
GATCAAGGTCACCTCGGTGCCGGAAAATTTTCCGGTGAGGTTTATGCATTGGACACTCAT
AATTTAGTGTGGAAAAAATGGGCCGACACCGATGATAACCATCCTGGGCCACGGGGATGG
TGTGCATTTTCTGCTGGACGATTGCATGACAAGGAGGGACTATTGGTATATGGTGGTAAC
TCGCCTAGTAACGATCGGCTCGATGACATTTTCTTTTTGAGTCCTTGTTTGGATGTGAAT
GAAAAATAATTATCTCGATTGTGTAGCAATATGTGCTAGTCTTTTGTGTGCTTGCAGGGA
CTCCGTTTGTGTGCATTGCAATTGTGGCGGTAGATGTTGTTTTTGTGAATGTAGTGCTCA
TATGCAGCTGTAATTATATGAATAATGCTGTGTTTTTCTATAGGTTTCGGCTTTTTAATT
TAATCGTTGTTTCAATAACTTGTGTGTTAGCTTTACAA