Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0057g00680.t01
CDS Infomation

cds chromosome:12X:12:9305325:9309244:1 gene:VIT_12s0057g00680 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGACATCATCTGGGTCTAACATCCACAATCAACCTCAATCAACAATGTTGCCTCCC
CGTCAGCAGCCAAGGACTGGAGGGTTGCAAACATCATTGTCGTTAGTTTCTTCCGATGGC
CGTGCATCTCCTGATCCACAGGAACCCAGATCAAACTCTGATCAGGTGCGTGACTCCCCT
TCGGAGAGTGCCAGTTCACGAGAAACGTGGCCCACTGCTGAGGCTGTAATGGGCAAGAAG
CTGGCAAATGGGAAAACGGATAATGACATTCCTGAACAGTCAGTCATTCGCCGGTATTCT
AACCTGGAGAAGCTAACTCTCCGCGACATAGCAAGAGAAAGAGTTGAAATGATTGCAGAA
AGAATGCTTCTTCTGCCTGATGAGCTTCTAGAGGAGCTAAAAAGCAGGCTCCGTATTATT
CTTGAAGGAAATGGTGGTTCTCAACATAGGGAGGAATTTTTGATTTTGCAGAAGCTTGTT
CAGAGTAGGTCTGATTTGACTGCTAAGACCTTGATTAGAGCTCACAGGGTGCAGCTGGAA
ATTCTGGTTGCAATAAATACTGGTATTCAGGGATTCCTGCATCCAAATATTAGTCTGTCT
CAAACTTCACTAATTGAAGTTTTCGTGTATAAGAGGTGTAGAAATATAGCATGCCAAAAC
CAGCTTCCTGCAGAGGATTGTACCTGTGAAGTATGCACCACTCGGAATGGCTTCTGCAAC
CTTTGCATGTGTGTTATCTGTAACAAGTTTGATTTTGAAGTGAATACCTGCCGTTGGATT
GGTTGTGATCTGTGTTCTCATTGGACTCACACAGATTGTGCTATTCGTGATGTACTAATT
TGCATGGGCCCTTCTGTTAAGAGTGGAGCAGGTGCTGGTGAGATGCTCTTCAGGTGCCGT
GCTTGCAATAGAACATCAGAGCTGTTAGGCTGGGTTAAAGATGTGTTCCAACATTGTGCA
CCTGCATGGGACCGTGAGGCTCTGATGAGAGAACTTGATTTTGTTAGTAGAATTTTCCGT
GGGAGTGAGGATACCAGAGGAAGGAAACTTTTTTGGAAGTGCGAGGAACTCATTGAAAAA
ATGAAAGGTGGAGTTCCTGAGTCAGCAGCTTGTAGAGTGATATTGATGCTTTTTCAAGAG
CTTGAAGTGGACTCACCAAAGAACACAGAAGCTGGGGAAGGTGGACGACTGATAGCTCCT
CAGGAGGCATGCAATCGAATTGCTGAGGTGGTGCAGGAGGCAGTAAGAAAAATGGAAATG
GTGGCCGATGAGAAGTTGAGGATGTTCAAGAAAGCCCGTTTGGCTCTTGAGGCTTGTGAC
CGTGAGCTTGAGGACAAGGCAAGGGAAGTCAATGAATTGAAGTTGGAGAGGCAACGGAAG
AAGCAACAGATAGATGAGTTGGAGAGCATTGTGAGACTCAAGCAGGCTGAGGCTGATATG
TTTCAGCTTAAGGCTAATGAGGCAAGGCGAGAGGCTGAGCGGCTGCAGAGGATTGCTCTT
GCCAAGTCAGAGAAATCAGAGGAGGAGTATGCTAGCAGATACCTGAAACTCCGGTTGAGC
GAGGCTGAAGCCGAGAAGCAGTATCTGTTTGAGAAGATCAAGCTTCAGGAGAGTTCGCGT
TCATCACAGAGTAATGGTGCAGGTGACTCTTCACAAATGCTGATGCTCTCAAAAATCCAG
GACCTGCTGAAAAATGTTTATCATGTCCCTCCGAAGTCAGAATGCCAGCCAAGTGAACAC
CACCCTATCAGGTCAAATCCCTGA

Peptide Sequence

PEP ID

VIT_12s0057g00680.t01
PEP Infomation

pep chromosome:12X:12:9305325:9309244:1 gene:VIT_12s0057g00680 transcript:VIT_12s0057g00680.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGTSSGSNIHNQPQSTMLPPRQQPRTGGLQTSLSLVSSDGRASPDPQEPRSNSDQVRDSP
SESASSRETWPTAEAVMGKKLANGKTDNDIPEQSVIRRYSNLEKLTLRDIARERVEMIAE
RMLLLPDELLEELKSRLRIILEGNGGSQHREEFLILQKLVQSRSDLTAKTLIRAHRVQLE
ILVAINTGIQGFLHPNISLSQTSLIEVFVYKRCRNIACQNQLPAEDCTCEVCTTRNGFCN
LCMCVICNKFDFEVNTCRWIGCDLCSHWTHTDCAIRDVLICMGPSVKSGAGAGEMLFRCR
ACNRTSELLGWVKDVFQHCAPAWDREALMRELDFVSRIFRGSEDTRGRKLFWKCEELIEK
MKGGVPESAACRVILMLFQELEVDSPKNTEAGEGGRLIAPQEACNRIAEVVQEAVRKMEM
VADEKLRMFKKARLALEACDRELEDKAREVNELKLERQRKKQQIDELESIVRLKQAEADM
FQLKANEARREAERLQRIALAKSEKSEEEYASRYLKLRLSEAEAEKQYLFEKIKLQESSR
SSQSNGAGDSSQMLMLSKIQDLLKNVYHVPPKSECQPSEHHPIRSNP

Transcript Sequence

Transcript ID

VIT_12s0057g00680.t01
Transcript Infomation

cdna chromosome:12X:12:9305325:9309244:1 gene:VIT_12s0057g00680 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTTTTGTGGTGGTCGCTCATGTCTGAAGTCTGAACAGCCTTGTTAGGGTTTCTAAGAAT
AGGTGAGATTCTCCTATGGGGACATCATCTGGGTCTAACATCCACAATCAACCTCAATCA
ACAATGTTGCCTCCCCGTCAGCAGCCAAGGACTGGAGGGTTGCAAACATCATTGTCGTTA
GTTTCTTCCGATGGCCGTGCATCTCCTGATCCACAGGAACCCAGATCAAACTCTGATCAG
GTGCGTGACTCCCCTTCGGAGAGTGCCAGTTCACGAGAAACGTGGCCCACTGCTGAGGCT
GTAATGGGCAAGAAGCTGGCAAATGGGAAAACGGATAATGACATTCCTGAACAGTCAGTC
ATTCGCCGGTATTCTAACCTGGAGAAGCTAACTCTCCGCGACATAGCAAGAGAAAGAGTT
GAAATGATTGCAGAAAGAATGCTTCTTCTGCCTGATGAGCTTCTAGAGGAGCTAAAAAGC
AGGCTCCGTATTATTCTTGAAGGAAATGGTGGTTCTCAACATAGGGAGGAATTTTTGATT
TTGCAGAAGCTTGTTCAGAGTAGGTCTGATTTGACTGCTAAGACCTTGATTAGAGCTCAC
AGGGTGCAGCTGGAAATTCTGGTTGCAATAAATACTGGTATTCAGGGATTCCTGCATCCA
AATATTAGTCTGTCTCAAACTTCACTAATTGAAGTTTTCGTGTATAAGAGGTGTAGAAAT
ATAGCATGCCAAAACCAGCTTCCTGCAGAGGATTGTACCTGTGAAGTATGCACCACTCGG
AATGGCTTCTGCAACCTTTGCATGTGTGTTATCTGTAACAAGTTTGATTTTGAAGTGAAT
ACCTGCCGTTGGATTGGTTGTGATCTGTGTTCTCATTGGACTCACACAGATTGTGCTATT
CGTGATGTACTAATTTGCATGGGCCCTTCTGTTAAGAGTGGAGCAGGTGCTGGTGAGATG
CTCTTCAGGTGCCGTGCTTGCAATAGAACATCAGAGCTGTTAGGCTGGGTTAAAGATGTG
TTCCAACATTGTGCACCTGCATGGGACCGTGAGGCTCTGATGAGAGAACTTGATTTTGTT
AGTAGAATTTTCCGTGGGAGTGAGGATACCAGAGGAAGGAAACTTTTTTGGAAGTGCGAG
GAACTCATTGAAAAAATGAAAGGTGGAGTTCCTGAGTCAGCAGCTTGTAGAGTGATATTG
ATGCTTTTTCAAGAGCTTGAAGTGGACTCACCAAAGAACACAGAAGCTGGGGAAGGTGGA
CGACTGATAGCTCCTCAGGAGGCATGCAATCGAATTGCTGAGGTGGTGCAGGAGGCAGTA
AGAAAAATGGAAATGGTGGCCGATGAGAAGTTGAGGATGTTCAAGAAAGCCCGTTTGGCT
CTTGAGGCTTGTGACCGTGAGCTTGAGGACAAGGCAAGGGAAGTCAATGAATTGAAGTTG
GAGAGGCAACGGAAGAAGCAACAGATAGATGAGTTGGAGAGCATTGTGAGACTCAAGCAG
GCTGAGGCTGATATGTTTCAGCTTAAGGCTAATGAGGCAAGGCGAGAGGCTGAGCGGCTG
CAGAGGATTGCTCTTGCCAAGTCAGAGAAATCAGAGGAGGAGTATGCTAGCAGATACCTG
AAACTCCGGTTGAGCGAGGCTGAAGCCGAGAAGCAGTATCTGTTTGAGAAGATCAAGCTT
CAGGAGAGTTCGCGTTCATCACAGAGTAATGGTGCAGGTGACTCTTCACAAATGCTGATG
CTCTCAAAAATCCAGGACCTGCTGAAAAATGTTTATCATGTCCCTCCGAAGTCAGAATGC
CAGCCAAGTGAACACCACCCTATCAGGTCAAATCCCTGATGGAATCCTATTGGGTCAATC
CCTGATGGAATGCTTCCTGGTATGCTATGTGTTAATTCAACTTGATAATAAGAAATGCAG
ACTTTGTGGTTTGGATAGATTGACTATGTTATTGGAAATTGTGAACTTAAAAGCTATGTT
CTAATTTCAAAATTATATTTGATTTGACATTTT