Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0057g00620.t01
CDS Infomation

cds chromosome:12X:12:9266351:9268609:1 gene:VIT_12s0057g00620 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGATTTTCAAGCTGCCAAGCTTAGAACTCCTTGATCTGATGTCTAATAGATATCTG
ACTGGCCATTTGCCTGAATTTCACAATGCTAGTCACCTCAAATATTTGGATCTCTATTGG
ACAAGTTTCTCTGGTCAGCTACCAGCTTCCATTGGATTCCTTAGTTCCTTGAAGGAATTG
GATATCTGCTCATGCAATTTCAGTGGGATGGTTCCAACTGCACTCGGCAACCTTACCCAG
CTTACCCACCTGGACCTTTCAAGTAACTCATTTAAGGGTCAGCTCACCTCTTCATTGACC
AACCTTATCCATCTCAATTTCTTGGATATTTCTAGGAATGATTTCAGTGTTGGGACCTTG
TCTTGGATTATTGTCAAGCTGACCAAATTCACTGCTTTGAACCTTGAAAAGACCAATTTA
ATTGGTGAGATCTTGCCTTCTCTTTCAAACCTAACTGGACTGACTTATTTAAACCTGGAG
TATAATCAACTTACTGGTAGAATTCCACCATGCCTTGGGAACCTGACCCTGTTAAAAACC
TTAGGTCTTGGGTACAATAATTTGGAAGGTCCAATACCAAGCTCAATATTTGAACTGATG
AACCTTGATACTCTCATTCTACGTGCAAACAAGTTGAGTGGCACAGTGGAGCTGAACATG
CTTGTTAAGCTCAAAAATCTCCACAAACTCGGCTTGTCTCATAACGATCTATCATTGCTC
ACTAACAACAGTCTCAATGGTTCTCTTCCAAGGCTTAGGCTTTTAGGATTAGCTTCATGC
AACTTGAGCGAGTTCCCACATTTCCTAAGGAACCAAGATGAATTGAAGTTTTTAACACTT
TCTGACAACAAAATTCATGGCCAAATACCAAAGTGGATGTGGAACATGGGTAAAGAAACT
CTTTGGGTCATGGACCTATCTAACAACTTATTAACCTGCTTCGAGCAGGCCCCAGTTGTC
CTTCCATGGATTACTCTACGAGTTCTAGAGCTTAGTTATAATCAGCTACAAGGGTCCCTT
CCAGTTCCACCATCTTCCATCTCTGATTATTTTGTCCATAACAACAGACTAAATGGAAAA
TTTCCGTCGTTGATTTGCAGCTTGCATCATCTTCACATTCTTGATTTGTCGAATAACAAC
TTAAGTGGCATGATTCCTCAATGTTTGAGCGACTCCAGCGATTCTCTATCAGTGTTGAAT
CTACGAGGCAACAACTTTCATGGGAGCATTCCTCAAACATTCACCAGCCAATGCAGATTA
AAGATGATTGATTTTAGTTACAATCAGTTAGAGGGGCAGATACCAAGATCATTGGGCAAT
TGTAAAGAGCTTGAGATTCTGAATCTTGGAAACAATCAGATCAATGATACGTTCCCCTTT
TGGTTGGGATCTTTTCCAGAGTTGCAACTTCTCATTTTGCGGCATAACAGATTTCATGGC
GCAATCGAGAATCCTAGAGCCAACTTTGAGTTCCCCACGCTGTGTATCATTGACCTCTCG
TACAATAATTTTGCAGGAAATTTGCCAGCAGGCTACTTTCTCACATGGGTGGCCATGAGC
AGGGTCGATGAAGAGAATTTTTCATATATGCAGTCAATGACGGGATTTGTCCTAATCCGA
ACATATCGGCTTTATGAAAACTACAATTACTCAATGACAATGACGAACAAAGGCATGGAA
AGGGTGTACCCGAAGATCCCTCGCAGTTTTAAAGCAATTGATCTCTCAAGCAACAAATTT
ATAGGAGAGATCCCAAAATCCATTGGGAAACTCAGGGGACTTCATTTGCTCAACATTTCC
TCCAACAGTCTTACTGGTCACATCCCATCTTTTCTTGGGAACTTAGCACAGCTTGAGGCA
CTGGACCTATCTCAAAACAATCTCTCAGGAGAGATCCCTCAGCAGCTAAAGGGAATGACA
TTCCTTGAGTTCTTCAATGTTTCTCACAATCATCTCATGGGACCTATACCGCAAGGGAAG
CAATTTAATACATTTCAGAACGACTCATACGAGGGAAATCCAGGATTGTGCGGAAATCCT
TTGTCAAAGGAGTGTGAAAACTCTAAGTCAACAGCACCACCACCACCAACCGACAAACAT
GGAGGGGACTTGGAGAGTGGCCGCAAAGTTGAGTTGATGATAGTATTGATGGGATATGGA
AGTGGTCTGGTAGTTGGAATGGCAATTGGTTACACCTTAACCACAAGGAAACATGAATGG
TTTGTCAAGACTTTCGGCAAGAGGCAGAGAAAGTGTTGA

Peptide Sequence

PEP ID

VIT_12s0057g00620.t01
PEP Infomation

pep chromosome:12X:12:9266351:9268609:1 gene:VIT_12s0057g00620 transcript:VIT_12s0057g00620.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGIFKLPSLELLDLMSNRYLTGHLPEFHNASHLKYLDLYWTSFSGQLPASIGFLSSLKEL
DICSCNFSGMVPTALGNLTQLTHLDLSSNSFKGQLTSSLTNLIHLNFLDISRNDFSVGTL
SWIIVKLTKFTALNLEKTNLIGEILPSLSNLTGLTYLNLEYNQLTGRIPPCLGNLTLLKT
LGLGYNNLEGPIPSSIFELMNLDTLILRANKLSGTVELNMLVKLKNLHKLGLSHNDLSLL
TNNSLNGSLPRLRLLGLASCNLSEFPHFLRNQDELKFLTLSDNKIHGQIPKWMWNMGKET
LWVMDLSNNLLTCFEQAPVVLPWITLRVLELSYNQLQGSLPVPPSSISDYFVHNNRLNGK
FPSLICSLHHLHILDLSNNNLSGMIPQCLSDSSDSLSVLNLRGNNFHGSIPQTFTSQCRL
KMIDFSYNQLEGQIPRSLGNCKELEILNLGNNQINDTFPFWLGSFPELQLLILRHNRFHG
AIENPRANFEFPTLCIIDLSYNNFAGNLPAGYFLTWVAMSRVDEENFSYMQSMTGFVLIR
TYRLYENYNYSMTMTNKGMERVYPKIPRSFKAIDLSSNKFIGEIPKSIGKLRGLHLLNIS
SNSLTGHIPSFLGNLAQLEALDLSQNNLSGEIPQQLKGMTFLEFFNVSHNHLMGPIPQGK
QFNTFQNDSYEGNPGLCGNPLSKECENSKSTAPPPPTDKHGGDLESGRKVELMIVLMGYG
SGLVVGMAIGYTLTTRKHEWFVKTFGKRQRKC

Transcript Sequence

Transcript ID

VIT_12s0057g00620.t01
Transcript Infomation

cdna chromosome:12X:12:9266351:9268609:1 gene:VIT_12s0057g00620 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGATTTTCAAGCTGCCAAGCTTAGAACTCCTTGATCTGATGTCTAATAGATATCTG
ACTGGCCATTTGCCTGAATTTCACAATGCTAGTCACCTCAAATATTTGGATCTCTATTGG
ACAAGTTTCTCTGGTCAGCTACCAGCTTCCATTGGATTCCTTAGTTCCTTGAAGGAATTG
GATATCTGCTCATGCAATTTCAGTGGGATGGTTCCAACTGCACTCGGCAACCTTACCCAG
CTTACCCACCTGGACCTTTCAAGTAACTCATTTAAGGGTCAGCTCACCTCTTCATTGACC
AACCTTATCCATCTCAATTTCTTGGATATTTCTAGGAATGATTTCAGTGTTGGGACCTTG
TCTTGGATTATTGTCAAGCTGACCAAATTCACTGCTTTGAACCTTGAAAAGACCAATTTA
ATTGGTGAGATCTTGCCTTCTCTTTCAAACCTAACTGGACTGACTTATTTAAACCTGGAG
TATAATCAACTTACTGGTAGAATTCCACCATGCCTTGGGAACCTGACCCTGTTAAAAACC
TTAGGTCTTGGGTACAATAATTTGGAAGGTCCAATACCAAGCTCAATATTTGAACTGATG
AACCTTGATACTCTCATTCTACGTGCAAACAAGTTGAGTGGCACAGTGGAGCTGAACATG
CTTGTTAAGCTCAAAAATCTCCACAAACTCGGCTTGTCTCATAACGATCTATCATTGCTC
ACTAACAACAGTCTCAATGGTTCTCTTCCAAGGCTTAGGCTTTTAGGATTAGCTTCATGC
AACTTGAGCGAGTTCCCACATTTCCTAAGGAACCAAGATGAATTGAAGTTTTTAACACTT
TCTGACAACAAAATTCATGGCCAAATACCAAAGTGGATGTGGAACATGGGTAAAGAAACT
CTTTGGGTCATGGACCTATCTAACAACTTATTAACCTGCTTCGAGCAGGCCCCAGTTGTC
CTTCCATGGATTACTCTACGAGTTCTAGAGCTTAGTTATAATCAGCTACAAGGGTCCCTT
CCAGTTCCACCATCTTCCATCTCTGATTATTTTGTCCATAACAACAGACTAAATGGAAAA
TTTCCGTCGTTGATTTGCAGCTTGCATCATCTTCACATTCTTGATTTGTCGAATAACAAC
TTAAGTGGCATGATTCCTCAATGTTTGAGCGACTCCAGCGATTCTCTATCAGTGTTGAAT
CTACGAGGCAACAACTTTCATGGGAGCATTCCTCAAACATTCACCAGCCAATGCAGATTA
AAGATGATTGATTTTAGTTACAATCAGTTAGAGGGGCAGATACCAAGATCATTGGGCAAT
TGTAAAGAGCTTGAGATTCTGAATCTTGGAAACAATCAGATCAATGATACGTTCCCCTTT
TGGTTGGGATCTTTTCCAGAGTTGCAACTTCTCATTTTGCGGCATAACAGATTTCATGGC
GCAATCGAGAATCCTAGAGCCAACTTTGAGTTCCCCACGCTGTGTATCATTGACCTCTCG
TACAATAATTTTGCAGGAAATTTGCCAGCAGGCTACTTTCTCACATGGGTGGCCATGAGC
AGGGTCGATGAAGAGAATTTTTCATATATGCAGTCAATGACGGGATTTGTCCTAATCCGA
ACATATCGGCTTTATGAAAACTACAATTACTCAATGACAATGACGAACAAAGGCATGGAA
AGGGTGTACCCGAAGATCCCTCGCAGTTTTAAAGCAATTGATCTCTCAAGCAACAAATTT
ATAGGAGAGATCCCAAAATCCATTGGGAAACTCAGGGGACTTCATTTGCTCAACATTTCC
TCCAACAGTCTTACTGGTCACATCCCATCTTTTCTTGGGAACTTAGCACAGCTTGAGGCA
CTGGACCTATCTCAAAACAATCTCTCAGGAGAGATCCCTCAGCAGCTAAAGGGAATGACA
TTCCTTGAGTTCTTCAATGTTTCTCACAATCATCTCATGGGACCTATACCGCAAGGGAAG
CAATTTAATACATTTCAGAACGACTCATACGAGGGAAATCCAGGATTGTGCGGAAATCCT
TTGTCAAAGGAGTGTGAAAACTCTAAGTCAACAGCACCACCACCACCAACCGACAAACAT
GGAGGGGACTTGGAGAGTGGCCGCAAAGTTGAGTTGATGATAGTATTGATGGGATATGGA
AGTGGTCTGGTAGTTGGAATGGCAATTGGTTACACCTTAACCACAAGGAAACATGAATGG
TTTGTCAAGACTTTCGGCAAGAGGCAGAGAAAGTGTTGA