Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0057g00550.t01
CDS Infomation

cds chromosome:12X:12:9116720:9122740:1 gene:VIT_12s0057g00550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGGTGTTCAAGATGATGTTGCTTCTGATAAATTGCAGCAGAGGCAGAGCCTCAAT
GCAGGGGTTAATGCATCTCAATCTGTTCAAGAAGTGACTGATCCTATAATACCTGAGAAA
GCATCAGAAGCGGAATTGAATCCATCTTTTGCTGCTTCAAGTTCACAAGTTGACATGGGT
ACTTCAGGGGAAGGTGCGGCAGATGATGTTGATTCTAATAAATTGCAGCAGAGACAAATT
CCTGATACAGGGGTCCATGCATCACAATCTCATCAAGAAGCAATCATGCCCTCCATCATA
CCTGAGAAGGCATCAGAAGATGGATACAACTGGCGAAAGTATGGGCAAAAGCATGTTAAA
GGAAATGAGTTTATTCGTAGCTATTACAGATGTACACATCCTAACTGCCAAGTGAAAAAG
CAACTGGAACGCTCCCATGATGGGCAAATAACTGATATTATTTATTTTGGTAAGCATGAT
CACCCTAAACTTCAAGTTGATCTTCCGTTGGCTGTTGGCCTTGTTGTCCCTGTCCAAGAA
GAAAGACCAAAGGAGCCATCATCAACTGTCGTGGAAGAAAAATCTTTGGATGGGGATGGC
CAGACATCTTGTCAAATTGAGCCAGTGGATGCCCCCCAACCTGCTATTGCAGTCAGTGAT
GATTGTGTGGATCGTGCTCTTGCAGTATGGAGCAGGACAAGAGATGAGACTGATAATGAT
GATGATCCTGACTCAAAAAGACAGAAGAAAGACATTAATAATGTCGATGCCACTCCGACC
GATAAGCCAAGTGGTGAACCGCGCATTGTTGTTCAGACTGTGAGTGAGGTAGATATTGTG
AATGATGGGTACCGCTGGCGGAAATATGGTCAGAAATTAGTGAAAGGCAATACAAATCCA
AGGAGTTATTACAGGTGCTCAAATGCAGGATGTCCAGTAAAAAAGCATGTGGAGAGGGCA
TCTCATGATCCAAAAATGGTTATAACCACATATGAAGGACAACACGACCATGATATGCCT
CCAGCAAGGACAGTTACCCATAATTCAGCAGGACCCAATACCACTACAACAGATGTGAAT
GACGAATCAAGAGCTAAATCAGAACAAAGCGACAATGTTGGCCTTGCAATAGTGCCCTAT
ATATGTTTGGGGCCTGAGAATAATAAATCAAACGATCAACAAACTCCAAGTGCAGAACCT
GTCCAGACCTAA

Peptide Sequence

PEP ID

VIT_12s0057g00550.t01
PEP Infomation

pep chromosome:12X:12:9116720:9122740:1 gene:VIT_12s0057g00550 transcript:VIT_12s0057g00550.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEGVQDDVASDKLQQRQSLNAGVNASQSVQEVTDPIIPEKASEAELNPSFAASSSQVDMG
TSGEGAADDVDSNKLQQRQIPDTGVHASQSHQEAIMPSIIPEKASEDGYNWRKYGQKHVK
GNEFIRSYYRCTHPNCQVKKQLERSHDGQITDIIYFGKHDHPKLQVDLPLAVGLVVPVQE
ERPKEPSSTVVEEKSLDGDGQTSCQIEPVDAPQPAIAVSDDCVDRALAVWSRTRDETDND
DDPDSKRQKKDINNVDATPTDKPSGEPRIVVQTVSEVDIVNDGYRWRKYGQKLVKGNTNP
RSYYRCSNAGCPVKKHVERASHDPKMVITTYEGQHDHDMPPARTVTHNSAGPNTTTTDVN
DESRAKSEQSDNVGLAIVPYICLGPENNKSNDQQTPSAEPVQT

Transcript Sequence

Transcript ID

VIT_12s0057g00550.t01
Transcript Infomation

cdna chromosome:12X:12:9116720:9122740:1 gene:VIT_12s0057g00550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACCGAACCGTCGCGATTCGACACGCCACCCTAAGACCACACCCGTCCAAGCCTCCCGCCC
CCGCTCCGGCCACTCGTCCGGCGCCTCCGGAGTGATCTCCGGACGTGATTGCGTTTCCGA
GACGGAAAATTTGGTGCTATTCTGTGTAATTGTACCTGATAGGAAGATGCTAGGGTTTAT
GTTTTGAGTTCCACGTTCGTTTCAAAAATGAAGTGAGAGAAGTTGAGAAATTTAACTCTT
TGGTGGTTGGTTTTTCATTGTTTGGGATTAATTGGATTGATTTGAGTTCTCAGTGTTGAT
TTGTTTATTTTTAGTTCGATTTTGTACTCTGCTTATCCTTTGTTGATTAGAAAATTAAGG
AGAATGGAAAAAATGTAAAAGATTTCAGAGATTTAAGTTGGATCAGAAAGTGGAAAGGTT
CTAATTATTTATTGACTTACAAGTACTTGAAATTGAATGATAGGTTCCAACAACCAGTGA
TTTTGGAACACTTGTGCAAGTCCAAGATCAATTCGAGTGGCAATCATTTACATATGACTT
AAGTTAAAAATTAAAAAGATAATGGTGCTCTGAGATTAACTGAACTTAACTGTCACTGCT
TCAAGTCCTCAAATTCACATGGGTACTTCAATGGAAGGTGTTCAAGATGATGTTGCTTCT
GATAAATTGCAGCAGAGGCAGAGCCTCAATGCAGGGGTTAATGCATCTCAATCTGTTCAA
GAAGTGACTGATCCTATAATACCTGAGAAAGCATCAGAAGCGGAATTGAATCCATCTTTT
GCTGCTTCAAGTTCACAAGTTGACATGGGTACTTCAGGGGAAGGTGCGGCAGATGATGTT
GATTCTAATAAATTGCAGCAGAGACAAATTCCTGATACAGGGGTCCATGCATCACAATCT
CATCAAGAAGCAATCATGCCCTCCATCATACCTGAGAAGGCATCAGAAGATGGATACAAC
TGGCGAAAGTATGGGCAAAAGCATGTTAAAGGAAATGAGTTTATTCGTAGCTATTACAGA
TGTACACATCCTAACTGCCAAGTGAAAAAGCAACTGGAACGCTCCCATGATGGGCAAATA
ACTGATATTATTTATTTTGGTAAGCATGATCACCCTAAACTTCAAGTTGATCTTCCGTTG
GCTGTTGGCCTTGTTGTCCCTGTCCAAGAAGAAAGACCAAAGGAGCCATCATCAACTGTC
GTGGAAGAAAAATCTTTGGATGGGGATGGCCAGACATCTTGTCAAATTGAGCCAGTGGAT
GCCCCCCAACCTGCTATTGCAGTCAGTGATGATTGTGTGGATCGTGCTCTTGCAGTATGG
AGCAGGACAAGAGATGAGACTGATAATGATGATGATCCTGACTCAAAAAGACAGAAGAAA
GACATTAATAATGTCGATGCCACTCCGACCGATAAGCCAAGTGGTGAACCGCGCATTGTT
GTTCAGACTGTGAGTGAGGTAGATATTGTGAATGATGGGTACCGCTGGCGGAAATATGGT
CAGAAATTAGTGAAAGGCAATACAAATCCAAGGAGTTATTACAGGTGCTCAAATGCAGGA
TGTCCAGTAAAAAAGCATGTGGAGAGGGCATCTCATGATCCAAAAATGGTTATAACCACA
TATGAAGGACAACACGACCATGATATGCCTCCAGCAAGGACAGTTACCCATAATTCAGCA
GGACCCAATACCACTACAACAGATGTGAATGACGAATCAAGAGCTAAATCAGAACAAAGC
GACAATGTTGGCCTTGCAATAGTGCCCTATATATGTTTGGGGCCTGAGAATAATAAATCA
AACGATCAACAAACTCCAAGTGCAGAACCTGTCCAGACCTAAACTCTTGTTTTCAGTAGC
AATAAGTTACTTAGGATCTCGATTAGATTGTGTGTGCGCATTGGAGGGTATCTTCTCTTT
TCCCTTCTCATTTTTTGGGGGTGGGATTACTTGTGATCGGTTATATAGACTGTAAGACTT
ACCACCAGGTGTGTAAAATTAGTCCAATAGGCATGAGATGTATCATGTAGATGTTCTCAT
AAGTATCCAATGTTCCTGATAGCTGTTCATGCTGTCTCTTATTGACTTCATTCCTGCATT
TGCCTTCTTCCATGTCCAGACAGTGCTTTGCTCATAATCCTTGATAGGTACAACACTTGG
TATTGAAAAATACTAAATTAGTTCATACCTGTTTGTCATATTCTA