Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0057g00530.t01
CDS Infomation

cds chromosome:12X:12:9095568:9097431:-1 gene:VIT_12s0057g00530 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGTCAGTTCCGTCGTCTGTCCCACGCGCTTCAAAACGCGTTTTCCAACATGCTTCTA
TCTCCGGGCCACTCTCCTCGGCACCTTTCTTCGCCTTCGCCTTCTCTCTCAGAGAAGCCT
CAGCAAAACCGTAATTCTTCTTCTGTTTTAAACGTTTCTGCGAACCCTAGGAAGGAAGTA
ACAGTTCTCGATGAGGATACGTACGTGGCCGCAATCGAGAAGATCGTTGAGCGCGACTTC
TTCCCCGACATTCCGAAGCTTCGCGACCGCCTCGAGTGGCTGGAGGCTGTTAGGTCCGGT
GACCCTCTTCGAATTCGTGATGTTCAGTTGAAGATCAGGGATCGGCGGGGCCGGAAGGCG
TTGAACTGCGCGGAAACGGAGAGGAACAGATCGCGAACACCTGGTTCGACTTTTACTAGA
ACTTTTACTCCTTTTGAATTGGATAAAACTCCTGATGTTTCGAATAGAGAGTCGTCTGTT
GCTGGGGAGAGTGCAGATGATGATTCTGAGGCTTTGCCGTTATCCCTCGATCAGTTTTTC
AGGAGGTATACTAGTGAGGATAATGAGAGTTTTTCGAAAATTTTGGAGAAGGCTAATAGG
AAGAGGAAGGAGAGGTATGAGTTTTTGACGGAGGGTGAAAAGGAGGATGTGAAATTGATC
GAGGATGTGAAGAGGGATCGGATTACAGACGGGTATGGGACTTCGGATCAGCCGCCGAGT
ACTTTGGATGGGTGGAAATATACAGCAAAGAATTTGTTGATGTATCATCCTGCTGACCGA
GGTGAGGCCCCATTGACCGAGGAGGAACGGGCAGAGAGGCTTAACGGTTTGACAAAGGAA
GTTAACCTCACAAACACTAGGTTTCATGGTAAATTGATGGATTCTAGGCCGAAAGATGAG
GATACTGTTGCAGTATTGTATACCCCCATTCCAGGTGCTACTCCTGTACCATTATCATTG
TCAGAGAGGGAAGGGGATAAGTCTAAGAAGTATGATTTAGAGGATTTGAGGAAGACGCCG
AATCCATTTTATGTGGAATCTAGAAAGAGAGCAGATAATGGGTATAGTTATGTGAAAACG
CCCTCACCTGCACCAGGTGTGGATGAATCACCATTCATTACATGGGGAGAAATAGAAGGG
ACGCCATTGAGGCTGGAGCCCGAGGACACACCAATTGGTATTGGCGGTAGTGGTGATGGT
CCCCATTTTAAGATTCCATGTCCTCCTTCTAGAGATTTGAAGGCACATTCATTGTCAAGG
GAGGCTGCTCGGAAATTGAGGGAGAGGTCTAAGATGTTTCAGAAGCCACCATTGCCATCG
CCAGTTCGAGGGGGAAGTGCAAGTCCAAGTGTAAGAACGCTTTCTCATGCAGCCCAGAAG
TTTGTGAGGAATGCAATTGCCAAGTCATCATGCTCAGTTGATGAATCCCTTCGTGCTAGT
TACCGAGGTGCAAGCCCTGGTATCAGTACTCCAAAAAGTGGAAGGAGTATGTCGAGGTTC
GGAAGAGATGGGAGCACAAGTACCAGGTCACCCTCTGTAAGAGAGGGTTCTAATCCTCCT
TGGTGA

Peptide Sequence

PEP ID

VIT_12s0057g00530.t01
PEP Infomation

pep chromosome:12X:12:9095568:9097431:-1 gene:VIT_12s0057g00530 transcript:VIT_12s0057g00530.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSQFRRLSHALQNAFSNMLLSPGHSPRHLSSPSPSLSEKPQQNRNSSSVLNVSANPRKEV
TVLDEDTYVAAIEKIVERDFFPDIPKLRDRLEWLEAVRSGDPLRIRDVQLKIRDRRGRKA
LNCAETERNRSRTPGSTFTRTFTPFELDKTPDVSNRESSVAGESADDDSEALPLSLDQFF
RRYTSEDNESFSKILEKANRKRKERYEFLTEGEKEDVKLIEDVKRDRITDGYGTSDQPPS
TLDGWKYTAKNLLMYHPADRGEAPLTEEERAERLNGLTKEVNLTNTRFHGKLMDSRPKDE
DTVAVLYTPIPGATPVPLSLSEREGDKSKKYDLEDLRKTPNPFYVESRKRADNGYSYVKT
PSPAPGVDESPFITWGEIEGTPLRLEPEDTPIGIGGSGDGPHFKIPCPPSRDLKAHSLSR
EAARKLRERSKMFQKPPLPSPVRGGSASPSVRTLSHAAQKFVRNAIAKSSCSVDESLRAS
YRGASPGISTPKSGRSMSRFGRDGSTSTRSPSVREGSNPPW

Transcript Sequence

Transcript ID

VIT_12s0057g00530.t01
Transcript Infomation

cdna chromosome:12X:12:9095568:9097431:-1 gene:VIT_12s0057g00530 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGTCAGTTCCGTCGTCTGTCCCACGCGCTTCAAAACGCGTTTTCCAACATGCTTCTA
TCTCCGGGCCACTCTCCTCGGCACCTTTCTTCGCCTTCGCCTTCTCTCTCAGAGAAGCCT
CAGCAAAACCGTAATTCTTCTTCTGTTTTAAACGTTTCTGCGAACCCTAGGAAGGAAGTA
ACAGTTCTCGATGAGGATACGTACGTGGCCGCAATCGAGAAGATCGTTGAGCGCGACTTC
TTCCCCGACATTCCGAAGCTTCGCGACCGCCTCGAGTGGCTGGAGGCTGTTAGGTCCGGT
GACCCTCTTCGAATTCGTGATGTTCAGTTGAAGATCAGGGATCGGCGGGGCCGGAAGGCG
TTGAACTGCGCGGAAACGGAGAGGAACAGATCGCGAACACCTGGTTCGACTTTTACTAGA
ACTTTTACTCCTTTTGAATTGGATAAAACTCCTGATGTTTCGAATAGAGAGTCGTCTGTT
GCTGGGGAGAGTGCAGATGATGATTCTGAGGCTTTGCCGTTATCCCTCGATCAGTTTTTC
AGGAGGTATACTAGTGAGGATAATGAGAGTTTTTCGAAAATTTTGGAGAAGGCTAATAGG
AAGAGGAAGGAGAGGTATGAGTTTTTGACGGAGGGTGAAAAGGAGGATGTGAAATTGATC
GAGGATGTGAAGAGGGATCGGATTACAGACGGGTATGGGACTTCGGATCAGCCGCCGAGT
ACTTTGGATGGGTGGAAATATACAGCAAAGAATTTGTTGATGTATCATCCTGCTGACCGA
GGTGAGGCCCCATTGACCGAGGAGGAACGGGCAGAGAGGCTTAACGGTTTGACAAAGGAA
GTTAACCTCACAAACACTAGGTTTCATGGTAAATTGATGGATTCTAGGCCGAAAGATGAG
GATACTGTTGCAGTATTGTATACCCCCATTCCAGGTGCTACTCCTGTACCATTATCATTG
TCAGAGAGGGAAGGGGATAAGTCTAAGAAGTATGATTTAGAGGATTTGAGGAAGACGCCG
AATCCATTTTATGTGGAATCTAGAAAGAGAGCAGATAATGGGTATAGTTATGTGAAAACG
CCCTCACCTGCACCAGGTGTGGATGAATCACCATTCATTACATGGGGAGAAATAGAAGGG
ACGCCATTGAGGCTGGAGCCCGAGGACACACCAATTGGTATTGGCGGTAGTGGTGATGGT
CCCCATTTTAAGATTCCATGTCCTCCTTCTAGAGATTTGAAGGCACATTCATTGTCAAGG
GAGGCTGCTCGGAAATTGAGGGAGAGGTCTAAGATGTTTCAGAAGCCACCATTGCCATCG
CCAGTTCGAGGGGGAAGTGCAAGTCCAAGTGTAAGAACGCTTTCTCATGCAGCCCAGAAG
TTTGTGAGGAATGCAATTGCCAAGTCATCATGCTCAGTTGATGAATCCCTTCGTGCTAGT
TACCGAGGTGCAAGCCCTGGTATCAGTACTCCAAAAAGTGGAAGGAGTATGTCGAGGTTC
GGAAGAGATGGGAGCACAAGTACCAGGTCACCCTCTGTAAGAGAGGGTTCTAATCCTCCT
TGGTGATATGAATTT