Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0057g00500.t01
CDS Infomation

cds chromosome:12X:12:9081595:9083619:1 gene:VIT_12s0057g00500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thymidine kinase [Source:UniProtKB/TrEMBL;Acc:F6HHL3]
Sequence

ATGTCTTCCTTCAAATCCCCAATTTCACTTACCTCCACCGGTGGAGTTGGGTCGATCCAT
CGCGCTCTGGGCGAGGTTCACGTCATCGTTGGCCCTATGTTTGCTGGAAAAACCACCGCA
CTCCTCCGTCGGATCAAATCAGAAAGCAATAATGGCAGAAATGTGGCTATGATAAAATCA
AGCAAGGATACGAGATATGCGACAGATTCGATTGTGACACATGATGGAGTGAAATTTCCA
TGCTGGGCTTTGCCCGATCTGTCATCGTTTAGGCAGAAATTTGGGGCCGAGGCTTATGAA
AAGCTGGAGGTGATTGGTATTGATGAAGCTCAATTCTTTGAAGACCTTTATGATTTTTGC
TGTGAGGTCGCTGACCATGATGGGAAAACTGTAATTGTTGCTGGCTTGGATGGTGACTAC
TTGAGGAGGAGCTTTGGTTCAGTGCTTGACGTAATACCCCTAGCTGATTCCGTAACAAAG
TTGACAGCTCGATGTGAACTCTGTGGCAAACGGGCTTTCTTTACTTTGAGGAAGATTGAA
GAGATGCAGACAGAACTTATTGGTGGTGCTGACATCTACATGCCTGTCTGTCGCCAGCAC
TATGTCAATGGACAAGCAGTTATTGAAGCTGCAAGGAATGCCCTGGAGTCTCGTAAAGAT
AAAGTTCAGAGTGACCCACATCCGGAGGCAGCTGCATTTATCTAA

Peptide Sequence

PEP ID

VIT_12s0057g00500.t01
PEP Infomation

pep chromosome:12X:12:9081595:9083619:1 gene:VIT_12s0057g00500 transcript:VIT_12s0057g00500.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thymidine kinase [Source:UniProtKB/TrEMBL;Acc:F6HHL3]
Sequence

MSSFKSPISLTSTGGVGSIHRALGEVHVIVGPMFAGKTTALLRRIKSESNNGRNVAMIKS
SKDTRYATDSIVTHDGVKFPCWALPDLSSFRQKFGAEAYEKLEVIGIDEAQFFEDLYDFC
CEVADHDGKTVIVAGLDGDYLRRSFGSVLDVIPLADSVTKLTARCELCGKRAFFTLRKIE
EMQTELIGGADIYMPVCRQHYVNGQAVIEAARNALESRKDKVQSDPHPEAAAFI

Transcript Sequence

Transcript ID

VIT_12s0057g00500.t01
Transcript Infomation

cdna chromosome:12X:12:9081595:9083619:1 gene:VIT_12s0057g00500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thymidine kinase [Source:UniProtKB/TrEMBL;Acc:F6HHL3]
Sequence

AAACCCTCGAATCCAGTGTTTCAGTGTTTCTCACAACTCAAATCCTTTCCCCAATTCCCA
TCAAAATTCCAAAATTCTCATCTCTCTAAGGCCCTGGTTTGGTGTCCTCGATGTCTTCCT
TCAAATCCCCAATTTCACTTACCTCCACCGGTGGAGTTGGGTCGATCCATCGCGCTCTGG
GCGAGGTTCACGTCATCGTTGGCCCTATGTTTGCTGGAAAAACCACCGCACTCCTCCGTC
GGATCAAATCAGAAAGCAATAATGGCAGAAATGTGGCTATGATAAAATCAAGCAAGGATA
CGAGATATGCGACAGATTCGATTGTGACACATGATGGAGTGAAATTTCCATGCTGGGCTT
TGCCCGATCTGTCATCGTTTAGGCAGAAATTTGGGGCCGAGGCTTATGAAAAGCTGGAGG
TGATTGGTATTGATGAAGCTCAATTCTTTGAAGACCTTTATGATTTTTGCTGTGAGGTCG
CTGACCATGATGGGAAAACTGTAATTGTTGCTGGCTTGGATGGTGACTACTTGAGGAGGA
GCTTTGGTTCAGTGCTTGACGTAATACCCCTAGCTGATTCCGTAACAAAGTTGACAGCTC
GATGTGAACTCTGTGGCAAACGGGCTTTCTTTACTTTGAGGAAGATTGAAGAGATGCAGA
CAGAACTTATTGGTGGTGCTGACATCTACATGCCTGTCTGTCGCCAGCACTATGTCAATG
GACAAGCAGTTATTGAAGCTGCAAGGAATGCCCTGGAGTCTCGTAAAGATAAAGTTCAGA
GTGACCCACATCCGGAGGCAGCTGCATTTATCTAATAGGGAATGCTATTTTTACAATATA
TATATATATATATTTTCAGTTTTTCACTGTTTTCCTGTGTGATGGATGATCACAAATATC
ATCTCCTGCTTGTTTACAGCCTAGCTTCTTGGGCTGGTGATAGTTTTCATCAGTTATCTG
TACAATATGCTGAACTTGGATCTACTATGGTTTCTTACGAAGTTATATATTGTATACTTG