Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0057g00380.t01
CDS Infomation

cds chromosome:12X:12:8991002:9004490:-1 gene:VIT_12s0057g00380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGCGCTCAACTGGGGTTAATATTTCGGATGCAATCATCAAAACTGGAGATGACTCT
CTCTCTATTGGAGATGGCAGCCAACACATCAACGTGGAAAAAGTAACCTGTGGACCTGGA
CATGGCATCAGTGTTGGGAGCCTTGGGAAGTACCACAATGAAGAACCTGTTGTTGGAGTT
ACTGTGAAGAACTGCACCCTCATCAACACAATGAATGGCATTAGGGTTAAAACATGGCCG
GATTCTCCTGCTAGTGTTGCCACTGACTTGCATTTTGAGGATATTATCATGAACAACGTC
GGCAATCCTATTCTTATCAATCAAGAATACTGCCCATATGATCAATGCCAAGCAAAGGTT
CCCTCGCAAGTTAAGATCAGCGATGTGAGCTTCCAAGGCATTTGTAGCATGTCTGGAACA
TTTTACCAGACAAAGAAGAGGGAAACGGAAAACATAGGCATGAAGTTGAATATCGCAGCA
ATCTCTCTTCTGTTATTGCTAACATCTGTCGCAGAAGTGTCTGGTGATACATATTTTGAT
GTTACCAAATATGGTGCCCAGGCTGATGGAAAGACCGATATTAGCCAGGCCTTACTTACA
GCTTGGGAAGCCGCCTGTGCCTCGCCTATTGCAAGTAGAGTTGTGATCCCAGCTGGGATA
TACGCCTTAGGCCAAGTAACCATTGAAGGCCCTTGCAAGGCTCCTATCAATCTCATTGTC
AAAGGCACTGTGAGGGCCCCAGTGGATACCAGCAGGTTCAAACCTCAAGCTGGTTGGGTT
GCTTTCCAACACCTTGACCAGTTCACGTTGTCCGGCTATGGGGTTTTTGATGGCCAAGGA
CAATCTGTATGGGGTCAAAAATGTTCCAGAACCAAATATTGCCACCAGCTTCCTATCAAT
CTGAGGTTCAATTTCCTAACCAACAGCATCATCAAGGACATAACTTCAAAGGACAGCAAA
CAGTTCCATATAAATGTATTGGGGTGCAGGAACATAACTTTCTTCCAAGTTGCAATCACT
GCACCAGAAGATAGCCAAAACACAGATGGAATTCACATTGGACGGTCGAGGGGGGTCAAT
ATTACTCATTCAACCATACAAACGGGAGATGACTGTGTCTCCATTGGTGATGGCAGTGAA
CAAATTGACATCACGAAAGTAAACTGTGGACCTGGCCATGGCATCAGTGTGGGAAGTCTA
GGATTGTACAAAAATGAAGCACCTGTGATTGGCATTAGGGTCAAGAACTGCACCCTCTCC
GACACCACGAATGGTGTCAGGGTAAAAACATGGCCTTCTTCCCCTCAAGGCACTGCAACT
GAAATGCATTTTCATGACATTGTCATGAATAATGTTTCCAATCCTATAATCATAGATCAA
GAGTACTGCCCTCATAACCAATGCAACTTACAGATGCTGCAGAGAATCTATGGCACAGCA
TGGGAGAATGAGGAACAATTGAAAGCATATCTTCACTTCAAAGAGGAGGCGAAACGCCGG
GATCACAGACGCCTTGGAATAGATCTTGACCTGTTCTCTATACAGGATGAAGCTGGTGGA
GGTCTAGTGTTCTGGCATCCAAAGGGTGCCATTTTGAAGATTTTATCAGTAGAACCAAGT
CTGCTACATAAAATAGAACATCATTTTAAAAATGCAAAATGCTTGTCATCGAATTGGATG
GGTATCCGCGTGCCAGCAAAACTCCCCATGGTACTTATATTTGAGGATTTGTATACTTGG
AATGTTTTCTTATATTTATTCTTGGATTCTTGA

Peptide Sequence

PEP ID

VIT_12s0057g00380.t01
PEP Infomation

pep chromosome:12X:12:8991002:9004490:-1 gene:VIT_12s0057g00380 transcript:VIT_12s0057g00380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGRSTGVNISDAIIKTGDDSLSIGDGSQHINVEKVTCGPGHGISVGSLGKYHNEEPVVGV
TVKNCTLINTMNGIRVKTWPDSPASVATDLHFEDIIMNNVGNPILINQEYCPYDQCQAKV
PSQVKISDVSFQGICSMSGTFYQTKKRETENIGMKLNIAAISLLLLLTSVAEVSGDTYFD
VTKYGAQADGKTDISQALLTAWEAACASPIASRVVIPAGIYALGQVTIEGPCKAPINLIV
KGTVRAPVDTSRFKPQAGWVAFQHLDQFTLSGYGVFDGQGQSVWGQKCSRTKYCHQLPIN
LRFNFLTNSIIKDITSKDSKQFHINVLGCRNITFFQVAITAPEDSQNTDGIHIGRSRGVN
ITHSTIQTGDDCVSIGDGSEQIDITKVNCGPGHGISVGSLGLYKNEAPVIGIRVKNCTLS
DTTNGVRVKTWPSSPQGTATEMHFHDIVMNNVSNPIIIDQEYCPHNQCNLQMLQRIYGTA
WENEEQLKAYLHFKEEAKRRDHRRLGIDLDLFSIQDEAGGGLVFWHPKGAILKILSVEPS
LLHKIEHHFKNAKCLSSNWMGIRVPAKLPMVLIFEDLYTWNVFLYLFLDS

Transcript Sequence

Transcript ID

VIT_12s0057g00380.t01
Transcript Infomation

cdna chromosome:12X:12:8991002:9004490:-1 gene:VIT_12s0057g00380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCTAAACACTGATGGAATCCACATGGGGCGCTCAACTGGGGTTAATATTTCGGATGCAAT
CATCAAAACTGGAGATGACTCTCTCTCTATTGGAGATGGCAGCCAACACATCAACGTGGA
AAAAGTAACCTGTGGACCTGGACATGGCATCAGTGTTGGGAGCCTTGGGAAGTACCACAA
TGAAGAACCTGTTGTTGGAGTTACTGTGAAGAACTGCACCCTCATCAACACAATGAATGG
CATTAGGGTTAAAACATGGCCGGATTCTCCTGCTAGTGTTGCCACTGACTTGCATTTTGA
GGATATTATCATGAACAACGTCGGCAATCCTATTCTTATCAATCAAGAATACTGCCCATA
TGATCAATGCCAAGCAAAGGTTCCCTCGCAAGTTAAGATCAGCGATGTGAGCTTCCAAGG
CATTTGTAGCATGTCTGGAACATTTTACCAGACAAAGAAGAGGGAAACGGAAAACATAGG
CATGAAGTTGAATATCGCAGCAATCTCTCTTCTGTTATTGCTAACATCTGTCGCAGAAGT
GTCTGGTGATACATATTTTGATGTTACCAAATATGGTGCCCAGGCTGATGGAAAGACCGA
TATTAGCCAGGCCTTACTTACAGCTTGGGAAGCCGCCTGTGCCTCGCCTATTGCAAGTAG
AGTTGTGATCCCAGCTGGGATATACGCCTTAGGCCAAGTAACCATTGAAGGCCCTTGCAA
GGCTCCTATCAATCTCATTGTCAAAGGCACTGTGAGGGCCCCAGTGGATACCAGCAGGTT
CAAACCTCAAGCTGGTTGGGTTGCTTTCCAACACCTTGACCAGTTCACGTTGTCCGGCTA
TGGGGTTTTTGATGGCCAAGGACAATCTGTATGGGGTCAAAAATGTTCCAGAACCAAATA
TTGCCACCAGCTTCCTATCAATCTGAGGTTCAATTTCCTAACCAACAGCATCATCAAGGA
CATAACTTCAAAGGACAGCAAACAGTTCCATATAAATGTATTGGGGTGCAGGAACATAAC
TTTCTTCCAAGTTGCAATCACTGCACCAGAAGATAGCCAAAACACAGATGGAATTCACAT
TGGACGGTCGAGGGGGGTCAATATTACTCATTCAACCATACAAACGGGAGATGACTGTGT
CTCCATTGGTGATGGCAGTGAACAAATTGACATCACGAAAGTAAACTGTGGACCTGGCCA
TGGCATCAGTGTGGGAAGTCTAGGATTGTACAAAAATGAAGCACCTGTGATTGGCATTAG
GGTCAAGAACTGCACCCTCTCCGACACCACGAATGGTGTCAGGGTAAAAACATGGCCTTC
TTCCCCTCAAGGCACTGCAACTGAAATGCATTTTCATGACATTGTCATGAATAATGTTTC
CAATCCTATAATCATAGATCAAGAGTACTGCCCTCATAACCAATGCAACTTACAGATGCT
GCAGAGAATCTATGGCACAGCATGGGAGAATGAGGAACAATTGAAAGCATATCTTCACTT
CAAAGAGGAGGCGAAACGCCGGGATCACAGACGCCTTGGAATAGATCTTGACCTGTTCTC
TATACAGGATGAAGCTGGTGGAGGTCTAGTGTTCTGGCATCCAAAGGGTGCCATTTTGAA
GATTTTATCAGTAGAACCAAGTCTGCTACATAAAATAGAACATCATTTTAAAAATGCAAA
ATGCTTGTCATCGAATTGGATGGGTATCCGCGTGCCAGCAAAACTCCCCATGGTACTTAT
ATTTGAGGATTTGTATACTTGGAATGTTTTCTTATATTTATTCTTGGATTCTTGA