Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0057g00260.t01
CDS Infomation

cds chromosome:12X:12:8897888:8904115:-1 gene:VIT_12s0057g00260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACGATTTTCTCCTTCTTCTCCGGAGCCTCCAGAGCTCTCGGTTCCAGCTCTAAGCTT
CTTGTTATCCTCTCTATCAGTAGTGGTGGTCTTGTGGCATACTCAGAATCACAAACAGAT
GCTGGTGCACAAAGTGCTGAGATCAAGCAAAAGGAACCCCAGAAGAAGAGAGTGGTGGTG
CTTGGAACTGGATGGGCTGGCACTAGTTTTCTGAAAGATTTGGATATCTCATCATATGAT
GTTAAAGTGGTTTCGCCCAGGAATTATTTTGCATTTACTCCTCTTTTACCTAGTGTCACA
TGTGGAACAGTTGAAGCACGAAGCATTGTAGAGCCAATTCGGAACATTATAAAGAAGAGA
AATGGAGAAATCCAATATTGGGAAGCGGAATGTGTTAAGATTGATGCTGCAAACAAAAAA
ATTCGATGTCGGTCTGTCATTGACAACAGCTTGGTAGGCAATGAAGAATTTCTTGTAGAC
TATGACTACTTGGTTATAGCAATGGGAGCACAAGTAAATACTTTTAACACCCCTGGCGTC
AACGAACACTGCCATTTTCTAAAGGAAATAGAGGATGCTCAGAAGATCCGAAGGAGTGTG
ATTGATTGTTTTGAAAGGGCAGTCCTTCCTGACTTAACTGATGAAGAGCGAAGGAGAAAC
CTTCATTTTGTTATTGTTGGAGGGGGTCCCACTGGTGTTGAATTTGCTGCAGAACTACAT
GACTTCATCCTAGAAGATTTAGTCAAGCTATATCCTATGGTTAAAGATCTTGTGAAAATA
ACAGTGATCCAATCAGGAGATCATATCTTAAACATGTTTGATGAGAGGATTAGTTCATTT
GCTGAAAGGAAGTTTGGAAGAGATGGTATCGAAGTTCAAACAGGATGTCGGGTTACAGGT
GTTTCCGATAAGGCAATGACCGTGAAGGTGAAATCAAAGGGAGAAATTTGTTCTGTGCCT
TATGGAATGGTTGTGTGGTCCACTGGTATTGTCACTCGCCCAGTTTTGAGAGACTTTATG
GATCAAATTGGCCAGAATAAAAGACATGTTCTAACAACTAATGAATGGTTGCGAGTAGAG
GGATGTGATGGTGTGTATGCTCTTGGTGATTGTGCTGCTGTAGCTCAACGTCGAGTCATG
GAAGATATCTCGACCATATTTAAGACCGCCGACAAAGATAATTCTGGTACCTTAACTGTT
AAAGAATTCCAAGATGTAATTGACGACATCCTCGTAAGGTATCCCCAAGTGGAACTATAT
TTGAAGAACAAGCATCTGAATGATGTGAAAGATCTGTTGAAGGATCCGCAGGGCCATGAG
AGAAAGGAAGTGGACATTGAAGGGTTTAAGTCTGCCCTTCGTCATGTGGATTCACAGATG
AAGAGCCTTCCTGCAACCGCTCAGGTTGCTGCTCAACAAGGTGCATACCTCTCTAGTTGC
TTTAGCCGTAGGCAGCAATGCCAAGAGACCCCAGAAGGGCCTTTACGTTTTAGAGATTCT
GGCCGTCATCATTTTCGTCCCTTTCGGTACAAGCATTTGGGGCAATTTGCCCCTCTGGGA
GGAGAGCAAGCAGCTGCAGAGCTCCCTGGAGACTGGGTATCCATCGGCCACAGCACCCAG
TGGCTCTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGCACAAGATTCTTGGTG
GTATCTGATTGGACGAGGAGATTCATTTTCGGGAGGGATTCAAGCCGAATATAA

Peptide Sequence

PEP ID

VIT_12s0057g00260.t01
PEP Infomation

pep chromosome:12X:12:8897888:8904115:-1 gene:VIT_12s0057g00260 transcript:VIT_12s0057g00260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTIFSFFSGASRALGSSSKLLVILSISSGGLVAYSESQTDAGAQSAEIKQKEPQKKRVVV
LGTGWAGTSFLKDLDISSYDVKVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRNIIKKR
NGEIQYWEAECVKIDAANKKIRCRSVIDNSLVGNEEFLVDYDYLVIAMGAQVNTFNTPGV
NEHCHFLKEIEDAQKIRRSVIDCFERAVLPDLTDEERRRNLHFVIVGGGPTGVEFAAELH
DFILEDLVKLYPMVKDLVKITVIQSGDHILNMFDERISSFAERKFGRDGIEVQTGCRVTG
VSDKAMTVKVKSKGEICSVPYGMVVWSTGIVTRPVLRDFMDQIGQNKRHVLTTNEWLRVE
GCDGVYALGDCAAVAQRRVMEDISTIFKTADKDNSGTLTVKEFQDVIDDILVRYPQVELY
LKNKHLNDVKDLLKDPQGHERKEVDIEGFKSALRHVDSQMKSLPATAQVAAQQGAYLSSC
FSRRQQCQETPEGPLRFRDSGRHHFRPFRYKHLGQFAPLGGEQAAAELPGDWVSIGHSTQ
WLWYSVYASKQVSWRTRFLVVSDWTRRFIFGRDSSRI

Transcript Sequence

Transcript ID

VIT_12s0057g00260.t01
Transcript Infomation

cdna chromosome:12X:12:8897888:8904115:-1 gene:VIT_12s0057g00260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAAGCTTTTGTTTCAGGCTTTGAGCTCCCTGCTCTGGGATCTCCCATCAAAGCCAGAAG
CACTGTGAAATGACGATTTTCTCCTTCTTCTCCGGAGCCTCCAGAGCTCTCGGTTCCAGC
TCTAAGCTTCTTGTTATCCTCTCTATCAGTAGTGGTGGTCTTGTGGCATACTCAGAATCA
CAAACAGATGCTGGTGCACAAAGTGCTGAGATCAAGCAAAAGGAACCCCAGAAGAAGAGA
GTGGTGGTGCTTGGAACTGGATGGGCTGGCACTAGTTTTCTGAAAGATTTGGATATCTCA
TCATATGATGTTAAAGTGGTTTCGCCCAGGAATTATTTTGCATTTACTCCTCTTTTACCT
AGTGTCACATGTGGAACAGTTGAAGCACGAAGCATTGTAGAGCCAATTCGGAACATTATA
AAGAAGAGAAATGGAGAAATCCAATATTGGGAAGCGGAATGTGTTAAGATTGATGCTGCA
AACAAAAAAATTCGATGTCGGTCTGTCATTGACAACAGCTTGGTAGGCAATGAAGAATTT
CTTGTAGACTATGACTACTTGGTTATAGCAATGGGAGCACAAGTAAATACTTTTAACACC
CCTGGCGTCAACGAACACTGCCATTTTCTAAAGGAAATAGAGGATGCTCAGAAGATCCGA
AGGAGTGTGATTGATTGTTTTGAAAGGGCAGTCCTTCCTGACTTAACTGATGAAGAGCGA
AGGAGAAACCTTCATTTTGTTATTGTTGGAGGGGGTCCCACTGGTGTTGAATTTGCTGCA
GAACTACATGACTTCATCCTAGAAGATTTAGTCAAGCTATATCCTATGGTTAAAGATCTT
GTGAAAATAACAGTGATCCAATCAGGAGATCATATCTTAAACATGTTTGATGAGAGGATT
AGTTCATTTGCTGAAAGGAAGTTTGGAAGAGATGGTATCGAAGTTCAAACAGGATGTCGG
GTTACAGGTGTTTCCGATAAGGCAATGACCGTGAAGGTGAAATCAAAGGGAGAAATTTGT
TCTGTGCCTTATGGAATGGTTGTGTGGTCCACTGGTATTGTCACTCGCCCAGTTTTGAGA
GACTTTATGGATCAAATTGGCCAGAATAAAAGACATGTTCTAACAACTAATGAATGGTTG
CGAGTAGAGGGATGTGATGGTGTGTATGCTCTTGGTGATTGTGCTGCTGTAGCTCAACGT
CGAGTCATGGAAGATATCTCGACCATATTTAAGACCGCCGACAAAGATAATTCTGGTACC
TTAACTGTTAAAGAATTCCAAGATGTAATTGACGACATCCTCGTAAGGTATCCCCAAGTG
GAACTATATTTGAAGAACAAGCATCTGAATGATGTGAAAGATCTGTTGAAGGATCCGCAG
GGCCATGAGAGAAAGGAAGTGGACATTGAAGGGTTTAAGTCTGCCCTTCGTCATGTGGAT
TCACAGATGAAGAGCCTTCCTGCAACCGCTCAGGTTGCTGCTCAACAAGGTGCATACCTC
TCTAGTTGCTTTAGCCGTAGGCAGCAATGCCAAGAGACCCCAGAAGGGCCTTTACGTTTT
AGAGATTCTGGCCGTCATCATTTTCGTCCCTTTCGGTACAAGCATTTGGGGCAATTTGCC
CCTCTGGGAGGAGAGCAAGCAGCTGCAGAGCTCCCTGGAGACTGGGTATCCATCGGCCAC
AGCACCCAGTGGCTCTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGCACAAGA
TTCTTGGTGGTATCTGATTGGACGAGGAGATTCATTTTCGGGAGGGATTCAAGCCGAATA
TAAAAGCCTAAAACAATTGCGAAAACTATCATATCAAGCTCACCTGCTGTTCTGATTGTG
ATGCTTCCACCTTCTTCTCCTGTAAATTTCTGTTGTTGTCTATTTTTTGGGAAACTCGGT
ATATTGTAATACTTAAGCAATGGACAATGCACTCTCGTTCTGATGTAATGCCATTTCTGA
TATGAATTTTATGATCAGCTATGAAAGTTGAAAGGGATACCATTGAGCTCCAAAA