Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0057g00250.t01
CDS Infomation

cds chromosome:12X:12:8892171:8897392:-1 gene:VIT_12s0057g00250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGACGTTTACTATCTTTGAAAGAGCCTTCAAGGCTTTTCGTGACAACCCTTCACTC
TCCAAGTTGATGGTTGTCTGCACAAAAATAATCGGTGGGGGCTTATTAGCTTTCGCAGAA
ACGAGGCCATTCTCCGGCTCAGATTCAGTACCAAAGAAGAAAGTGGTGGTCCTTGGAACT
GGGTGGGCAGGCACAAGTTTCCTGAAGAACTTGAAGAGTTCCACCTTCGAAGTCCAGGTG
GTGTCGCCCCGTAACTATTTTGCATTTACTCCTCTGCTGCCAAGTGTTACCTGTGGCACG
GTGGAAGCTCGCAGCATTGTGGAGCCTATTCGGAACATTGTCAGGAAGAAAGGTATAAAT
ATTGAATTCAAGGAAGCTGAATGCTACAAGATTGATACAGATAATAATAAAGTTTATTGT
AGATCAGGCCAGGACACCAATTTAGGAGGGGAAGAGGAATTTTCTGTAGATTATGACTAC
TTGGTGATAGCCATGGGGGCTAGATCAAACACATTCAACACTCCTGGTGTGGTAGAGAAT
TGCCATTTCTTGAAGGAAGTGGAAGATGCTCAGAGGATTCGTAGGACTGTGATCGACTGC
TTTGAGAGGGCAAGCCTTCCCAATCTTAGTGAAGAAGAGAGGAAGAGGATCCTGCATTTC
GTGGTTGTTGGGGGTGGCCCAACAGGAGTGGAGTTCGCTGCAGAACTTCATGATTTTGTT
CTTGAAGACTTAGCTAAACTGTATCCTAGTGTAAAAAATCTTGCAAAGATAACACTCCTC
GAGGCAGGCGATCATATCTTGAACATGTTTGACAAAAGAATTACTGCTTTTGCTGAAGAG
AAGTTCCAGAGAGATGGTATCCATCTGAAAACAGGGTCAATGGTGATCAAAGTAGATGAT
AAACATATTTCTACGAAGGAAAGATCAACTGGGGAAGTTTCAGAAATCCCATTTGGAATG
GTCGTATGGTCAACTGGTATTGGTACTCGTCCTGTCATAATGGACTTCATGAATCAGATT
GGCCAGACTAACAGGCGGGCTTTAGCAACTGATGAATGGTTGAGGGTGGAGGGATGCAAT
AACATATATGCTCTAGGTGACTGTGCTACAATTAATCAACGAAAAGTCATGGAAGACATT
TCTGTGATATTCAGCAAGGCAGACAAGAATAATTCAGGAACTCTAAATTTGAAAGACTTC
CAAGAAGTAATTGATGACATTTGTGAGAGGTACCCTCAAGTGGGGCTATACTTGAAAAAG
AGGCAGATGAGAAACATTGCTGATTTACTGAAGAGTTCTCAAGCTGAAAAACAGGGAACT
GAATTGGATATTGCGTTGTTCACATCAGCTCTTTCTGAAGTGGATTCCCAGATGAAAAAT
CTTCCTGCAACAGCTCAGGTAGCTGCTCAACAAGGCCAGTACCTTGCCAACTGCTTCAAT
CGCATGGAAGAGTGTGAAAGGAATCCTGAAGGTCCTCTCAGGTTCAGGGGAACAGGACGC
CATCGGTTTCATCCTTTCAGGTACAAGCATCTTGGGCAGTTTGCTCCACTGGGAGGTGAG
CAAGCTGCAGCTCAACTCCCTGGGGATTGGGTTTCAATTGGTCAAAGCACCCAATGGCTC
TGGTATTCAGTATATGCAAGCAAGCAAGTCAGCTGGCGCACAAGAGCATTGGTGGTATCT
GACTGGGGACGGCGGTTCATTTTTGGAAGGGACTCAAGCAGAATCTGA

Peptide Sequence

PEP ID

VIT_12s0057g00250.t01
PEP Infomation

pep chromosome:12X:12:8892171:8897392:-1 gene:VIT_12s0057g00250 transcript:VIT_12s0057g00250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRTFTIFERAFKAFRDNPSLSKLMVVCTKIIGGGLLAFAETRPFSGSDSVPKKKVVVLGT
GWAGTSFLKNLKSSTFEVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRNIVRKKGIN
IEFKEAECYKIDTDNNKVYCRSGQDTNLGGEEEFSVDYDYLVIAMGARSNTFNTPGVVEN
CHFLKEVEDAQRIRRTVIDCFERASLPNLSEEERKRILHFVVVGGGPTGVEFAAELHDFV
LEDLAKLYPSVKNLAKITLLEAGDHILNMFDKRITAFAEEKFQRDGIHLKTGSMVIKVDD
KHISTKERSTGEVSEIPFGMVVWSTGIGTRPVIMDFMNQIGQTNRRALATDEWLRVEGCN
NIYALGDCATINQRKVMEDISVIFSKADKNNSGTLNLKDFQEVIDDICERYPQVGLYLKK
RQMRNIADLLKSSQAEKQGTELDIALFTSALSEVDSQMKNLPATAQVAAQQGQYLANCFN
RMEECERNPEGPLRFRGTGRHRFHPFRYKHLGQFAPLGGEQAAAQLPGDWVSIGQSTQWL
WYSVYASKQVSWRTRALVVSDWGRRFIFGRDSSRI

Transcript Sequence

Transcript ID

VIT_12s0057g00250.t01
Transcript Infomation

cdna chromosome:12X:12:8892171:8897392:-1 gene:VIT_12s0057g00250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGACGTTTACTATCTTTGAAAGAGCCTTCAAGGCTTTTCGTGACAACCCTTCACTC
TCCAAGTTGATGGTTGTCTGCACAAAAATAATCGGTGGGGGCTTATTAGCTTTCGCAGAA
ACGAGGCCATTCTCCGGCTCAGATTCAGTACCAAAGAAGAAAGTGGTGGTCCTTGGAACT
GGGTGGGCAGGCACAAGTTTCCTGAAGAACTTGAAGAGTTCCACCTTCGAAGTCCAGGTG
GTGTCGCCCCGTAACTATTTTGCATTTACTCCTCTGCTGCCAAGTGTTACCTGTGGCACG
GTGGAAGCTCGCAGCATTGTGGAGCCTATTCGGAACATTGTCAGGAAGAAAGGTATAAAT
ATTGAATTCAAGGAAGCTGAATGCTACAAGATTGATACAGATAATAATAAAGTTTATTGT
AGATCAGGCCAGGACACCAATTTAGGAGGGGAAGAGGAATTTTCTGTAGATTATGACTAC
TTGGTGATAGCCATGGGGGCTAGATCAAACACATTCAACACTCCTGGTGTGGTAGAGAAT
TGCCATTTCTTGAAGGAAGTGGAAGATGCTCAGAGGATTCGTAGGACTGTGATCGACTGC
TTTGAGAGGGCAAGCCTTCCCAATCTTAGTGAAGAAGAGAGGAAGAGGATCCTGCATTTC
GTGGTTGTTGGGGGTGGCCCAACAGGAGTGGAGTTCGCTGCAGAACTTCATGATTTTGTT
CTTGAAGACTTAGCTAAACTGTATCCTAGTGTAAAAAATCTTGCAAAGATAACACTCCTC
GAGGCAGGCGATCATATCTTGAACATGTTTGACAAAAGAATTACTGCTTTTGCTGAAGAG
AAGTTCCAGAGAGATGGTATCCATCTGAAAACAGGGTCAATGGTGATCAAAGTAGATGAT
AAACATATTTCTACGAAGGAAAGATCAACTGGGGAAGTTTCAGAAATCCCATTTGGAATG
GTCGTATGGTCAACTGGTATTGGTACTCGTCCTGTCATAATGGACTTCATGAATCAGATT
GGCCAGACTAACAGGCGGGCTTTAGCAACTGATGAATGGTTGAGGGTGGAGGGATGCAAT
AACATATATGCTCTAGGTGACTGTGCTACAATTAATCAACGAAAAGTCATGGAAGACATT
TCTGTGATATTCAGCAAGGCAGACAAGAATAATTCAGGAACTCTAAATTTGAAAGACTTC
CAAGAAGTAATTGATGACATTTGTGAGAGGTACCCTCAAGTGGGGCTATACTTGAAAAAG
AGGCAGATGAGAAACATTGCTGATTTACTGAAGAGTTCTCAAGCTGAAAAACAGGGAACT
GAATTGGATATTGCGTTGTTCACATCAGCTCTTTCTGAAGTGGATTCCCAGATGAAAAAT
CTTCCTGCAACAGCTCAGGTAGCTGCTCAACAAGGCCAGTACCTTGCCAACTGCTTCAAT
CGCATGGAAGAGTGTGAAAGGAATCCTGAAGGTCCTCTCAGGTTCAGGGGAACAGGACGC
CATCGGTTTCATCCTTTCAGGTACAAGCATCTTGGGCAGTTTGCTCCACTGGGAGGTGAG
CAAGCTGCAGCTCAACTCCCTGGGGATTGGGTTTCAATTGGTCAAAGCACCCAATGGCTC
TGGTATTCAGTATATGCAAGCAAGCAAGTCAGCTGGCGCACAAGAGCATTGGTGGTATCT
GACTGGGGACGGCGGTTCATTTTTGGAAGGGACTCAAGCAGAATCTGAGACAG