Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0057g00020.t01
CDS Infomation

cds chromosome:12X:12:8740143:8744479:-1 gene:VIT_12s0057g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGCTGTGACTTCTCTATCTTTCTCGGCATTAGGTCAATCTTCGGAGAGGAAAGTT
CCCGTTCCGACGACTCGCTCGTTCGCTTCCGCCTTCGAGGCTTTTCGTTTCCGTGCGAAT
TTTTATGCCGTGGGCGTTCGATCTTCGAGTTCGAGTTCGAGTTCTCGGATGGTTGTTCAG
TGCATGTCTAGTGTAACAGATGTGCCCACTGTATCCGAGACAAAGATGAATTTTCTGAAA
AATTATAAACGGCCAATCCCTAGTATCTACAACACTCTGCTGCAGGAGCTGATGGTACAA
CAACATTTGATGAGGTACAAGAGGACTTATCGATATGATGCTGTCTTTGCCCTTGGATTT
GTTACTGTATATGATCAACTCATGGATGGGTATCCAAGTGATGAGGATCGAGATATCATC
TTTCAAGTGTATATCAAGGCATTGAGGGAGGATCCGGAGCAATACAGAAAAGATGCACAA
ATGTTGGAAGAGTGGGCTCGGTCTCAGACTGCTAGTTCATTAGTTGAGTTTTCATCTAAA
GAAGGAGAAGTTGAAGGAATTTTAAAGGATATTGCAGAAAGAGCTGGGGGGAAAGGTAGT
TTCAGCTACAGTCGTTTCTTTGCCATTGGGCTATTTCGTCTTCTTGAATTGGCAAATGCA
ACTGAACCCACTATTTTAGAAAAGCTTTGTGCAGCCTTCAACATAAGCAAAAGGAGTGTG
GATAGGGACCTTGATGTATACCGCAACCTGCTTACCAAGCTGGTTCAAGCAAAAGAGCTT
CTCAAGGAATATGTGGATAGGGAGAAGAAGAAAAGAGAAGAAAGGGTCGAGTCTCAGAAG
GCTAATGAGGCCATCACAAAATGCTTGGGAGAATACGAATACACAGGTGTATTTTGGTGA

Peptide Sequence

PEP ID

VIT_12s0057g00020.t01
PEP Infomation

pep chromosome:12X:12:8740143:8744479:-1 gene:VIT_12s0057g00020 transcript:VIT_12s0057g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAVTSLSFSALGQSSERKVPVPTTRSFASAFEAFRFRANFYAVGVRSSSSSSSSRMVVQ
CMSSVTDVPTVSETKMNFLKNYKRPIPSIYNTLLQELMVQQHLMRYKRTYRYDAVFALGF
VTVYDQLMDGYPSDEDRDIIFQVYIKALREDPEQYRKDAQMLEEWARSQTASSLVEFSSK
EGEVEGILKDIAERAGGKGSFSYSRFFAIGLFRLLELANATEPTILEKLCAAFNISKRSV
DRDLDVYRNLLTKLVQAKELLKEYVDREKKKREERVESQKANEAITKCLGEYEYTGVFW

Transcript Sequence

Transcript ID

VIT_12s0057g00020.t01
Transcript Infomation

cdna chromosome:12X:12:8740143:8744479:-1 gene:VIT_12s0057g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGAAAAAGAAAAAAGAAAGTCCAATTTCTTCTGCCATTTTTCTCACCTTCATGACTATG
AGAAAGCGTTTCCGACTTTGATTTTCCTGGAAAATTTTCGCATTTCTAACCCTGTAACGC
AGTGTTTCTTCCTCTCTATCCCTTTTTTTCTCTCCTCTTCGGCTTCGCTCTGAAATGGCG
GCTGTGACTTCTCTATCTTTCTCGGCATTAGGTCAATCTTCGGAGAGGAAAGTTCCCGTT
CCGACGACTCGCTCGTTCGCTTCCGCCTTCGAGGCTTTTCGTTTCCGTGCGAATTTTTAT
GCCGTGGGCGTTCGATCTTCGAGTTCGAGTTCGAGTTCTCGGATGGTTGTTCAGTGCATG
TCTAGTGTAACAGATGTGCCCACTGTATCCGAGACAAAGATGAATTTTCTGAAAAATTAT
AAACGGCCAATCCCTAGTATCTACAACACTCTGCTGCAGGAGCTGATGGTACAACAACAT
TTGATGAGGTACAAGAGGACTTATCGATATGATGCTGTCTTTGCCCTTGGATTTGTTACT
GTATATGATCAACTCATGGATGGGTATCCAAGTGATGAGGATCGAGATATCATCTTTCAA
GTGTATATCAAGGCATTGAGGGAGGATCCGGAGCAATACAGAAAAGATGCACAAATGTTG
GAAGAGTGGGCTCGGTCTCAGACTGCTAGTTCATTAGTTGAGTTTTCATCTAAAGAAGGA
GAAGTTGAAGGAATTTTAAAGGATATTGCAGAAAGAGCTGGGGGGAAAGGTAGTTTCAGC
TACAGTCGTTTCTTTGCCATTGGGCTATTTCGTCTTCTTGAATTGGCAAATGCAACTGAA
CCCACTATTTTAGAAAAGCTTTGTGCAGCCTTCAACATAAGCAAAAGGAGTGTGGATAGG
GACCTTGATGTATACCGCAACCTGCTTACCAAGCTGGTTCAAGCAAAAGAGCTTCTCAAG
GAATATGTGGATAGGGAGAAGAAGAAAAGAGAAGAAAGGGTCGAGTCTCAGAAGGCTAAT
GAGGCCATCACAAAATGCTTGGGAGAATACGAATACACAGGTGTATTTTGGTGATTCAGA
TACATCCTATCTCACCTTGTTAATTTTTTTTTTCCTTTTTCCCCTATTATATTAAAAGAA
TTTTCCATTGTACCATGCAAATGTATTATGTTGCTCATTAGTTGATACATGAAATTCCCA
CATAAGAATTGGCAATTTTAATAGCAATCAAAATCT