Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0055g01150.t01
CDS Infomation

cds chromosome:12X:12:14887791:14898275:-1 gene:VIT_12s0055g01150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGCAATCTTTCTCTGCTTAATTTCTCTGGTTTTGAGGGTTTCCGGTATTTCTGAA
GGTGATGCCTTGTATGCACTAAAGTCAAGTTTAGTCGACCCTAAAGATGTTTTACAAAGT
TGGGATACTAGCAGTGGTAATCCTTGCATATGGTTTCACGTTACGTGCAATGGTGATGGT
AATGTTATAAGAGTTGATCTTGGAAATGGAAGTTTATCTGGTCAATTGGATTCAAGAGTT
GGTCAGCTTACAAAATTAGAATATTTGGGACTTTATAATAATAACATAAGTGGAAAAATA
CCGGAGGAGCTTGGGAATTTGGAAAACTTGATGAGCTTGGATCTTTACTTCAACAATTTA
AGCGGTCCAATTCCGGGCACATTGGGCAAGCTTCGAAAACTACATTTCTTGCGGCTTAAC
AACAACATCTTGATGGGAACTATTCCTATGTCTTTAACTGCTGTATCATCACTGGAAATC
CTGGATCTATCGAACAACAAACTAACAGGAGATATACCAGTCAATGGCTCCTTTTCATTA
TTTACTCCCATCAGTTTTGGTAATAATCGTCTAAGTAATAATTCTCCAAAAAGAACGCTC
GATTCTCCATCTCCGATTTCTCCAAATCCATTGACTCCACCGACTCCTTCAGGAAACAGT
GCCATTGGTGTCATTGCTGGATTTATTGCTCTTGGTGTGTTCATTGCCTCTGCAATTGTT
TTTGTTTGTTGGCGACTAAGGAGACCACGGGCGCACTTTTTTGATGTACCTGCTGAGGAA
GATCCATTAGTTCATTTGGGACAGCTCAGAAGGTTTTCTCTTCATCAACTAAAATATGCA
ACAAACAATTTTAGCAATAAAGACATACTGGGTAGAGGTGGATTTGGTAAAGTTTACAAA
GGACGCTTGGCTGATGGTTCTCTAGTGGCAATAAAAAGATTGAAAGAGGAGCGTACTCAT
GGTGGGGAACTGCAGTTTCAGACAGAATTAAGAATGATCAGCATGGCAGTGCATAGGAAT
CTACTTCGTCTGCAAGGCTTTTGCATGACATCGACAGAAAGGTTGCTTGTCTATCCTCTT
ATGGTTAATGGAAGTGTTGCATCATGTTTAAGAGAGCGGACAGATGGACAATCCCCTCTT
GATTGGCCAGCAAGGAAACAAATTGCATTGGGATCTGCAAGGGGGCTTGCTTATTTGCAT
GATTCTTGTGACCCTAAGGTAATTCATCGTGATGTGAAGGCAGCAAACATACTGTTGGAT
GAAGAGTTTGAAGCAGTGGTTGCAGATTTTGGGCCGGCTAAACTCATGGACTACAATGAT
ACTCATGTTACCACAGCTGTACATGGAACACTTGGGCATATTGCACCAGAGTACCTCTCC
ACTGGAAGGTCTTCAGAGAAGACTGATGTTTATGGATATGGGATCATGCTTCTTGAGCTC
ATCACTGGGCAGAGGGCTTTTGATCTTGCTCGGTTAGCCGGTAATGAGGACGTTATGTTA
CTCAGTTGGGTTAAGGAACTGTTGAACAACAAGAAGTTGGAAACACTGGTTGATTCCAAG
CTGCAGGGCAATTACATTGTGGAGGAGGTAGAGGAGCTAATCCAGGTGGCTCTCCTTTGC
ACACTAGATGCAGCTTCAGACCGACCCAAGATGTCAGATGTGGTTAAAATGCTTGAAGGT
GATGGTTTAGCTGAAAGGTGGGAACAGTGGCAAAAGAAGGATATAATTTGCGGAGAGCAA
AATCATAGCAACTTCCCCTCTAATAATTGGATTATAAATGACTCCACTCCAGGCCTTCGT
CCTGAAGAATTGTCCGGTCCCAGATGA

Peptide Sequence

PEP ID

VIT_12s0055g01150.t01
PEP Infomation

pep chromosome:12X:12:14887791:14898275:-1 gene:VIT_12s0055g01150 transcript:VIT_12s0055g01150.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEAIFLCLISLVLRVSGISEGDALYALKSSLVDPKDVLQSWDTSSGNPCIWFHVTCNGDG
NVIRVDLGNGSLSGQLDSRVGQLTKLEYLGLYNNNISGKIPEELGNLENLMSLDLYFNNL
SGPIPGTLGKLRKLHFLRLNNNILMGTIPMSLTAVSSLEILDLSNNKLTGDIPVNGSFSL
FTPISFGNNRLSNNSPKRTLDSPSPISPNPLTPPTPSGNSAIGVIAGFIALGVFIASAIV
FVCWRLRRPRAHFFDVPAEEDPLVHLGQLRRFSLHQLKYATNNFSNKDILGRGGFGKVYK
GRLADGSLVAIKRLKEERTHGGELQFQTELRMISMAVHRNLLRLQGFCMTSTERLLVYPL
MVNGSVASCLRERTDGQSPLDWPARKQIALGSARGLAYLHDSCDPKVIHRDVKAANILLD
EEFEAVVADFGPAKLMDYNDTHVTTAVHGTLGHIAPEYLSTGRSSEKTDVYGYGIMLLEL
ITGQRAFDLARLAGNEDVMLLSWVKELLNNKKLETLVDSKLQGNYIVEEVEELIQVALLC
TLDAASDRPKMSDVVKMLEGDGLAERWEQWQKKDIICGEQNHSNFPSNNWIINDSTPGLR
PEELSGPR

Transcript Sequence

Transcript ID

VIT_12s0055g01150.t01
Transcript Infomation

cdna chromosome:12X:12:14887791:14898275:-1 gene:VIT_12s0055g01150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGACTTTGACTTGAGTTGATGCATCAAGTGTTGATATGGAAGAGTGAGATTCTTGAAGAG
CTGGAGACCAGAGGCAGTCATGGAGGCAATCTTTCTCTGCTTAATTTCTCTGGTTTTGAG
GGTTTCCGGTATTTCTGAAGGTGATGCCTTGTATGCACTAAAGTCAAGTTTAGTCGACCC
TAAAGATGTTTTACAAAGTTGGGATACTAGCAGTGGTAATCCTTGCATATGGTTTCACGT
TACGTGCAATGGTGATGGTAATGTTATAAGAGTTGATCTTGGAAATGGAAGTTTATCTGG
TCAATTGGATTCAAGAGTTGGTCAGCTTACAAAATTAGAATATTTGGGACTTTATAATAA
TAACATAAGTGGAAAAATACCGGAGGAGCTTGGGAATTTGGAAAACTTGATGAGCTTGGA
TCTTTACTTCAACAATTTAAGCGGTCCAATTCCGGGCACATTGGGCAAGCTTCGAAAACT
ACATTTCTTGCGGCTTAACAACAACATCTTGATGGGAACTATTCCTATGTCTTTAACTGC
TGTATCATCACTGGAAATCCTGGATCTATCGAACAACAAACTAACAGGAGATATACCAGT
CAATGGCTCCTTTTCATTATTTACTCCCATCAGTTTTGGTAATAATCGTCTAAGTAATAA
TTCTCCAAAAAGAACGCTCGATTCTCCATCTCCGATTTCTCCAAATCCATTGACTCCACC
GACTCCTTCAGGAAACAGTGCCATTGGTGTCATTGCTGGATTTATTGCTCTTGGTGTGTT
CATTGCCTCTGCAATTGTTTTTGTTTGTTGGCGACTAAGGAGACCACGGGCGCACTTTTT
TGATGTACCTGCTGAGGAAGATCCATTAGTTCATTTGGGACAGCTCAGAAGGTTTTCTCT
TCATCAACTAAAATATGCAACAAACAATTTTAGCAATAAAGACATACTGGGTAGAGGTGG
ATTTGGTAAAGTTTACAAAGGACGCTTGGCTGATGGTTCTCTAGTGGCAATAAAAAGATT
GAAAGAGGAGCGTACTCATGGTGGGGAACTGCAGTTTCAGACAGAATTAAGAATGATCAG
CATGGCAGTGCATAGGAATCTACTTCGTCTGCAAGGCTTTTGCATGACATCGACAGAAAG
GTTGCTTGTCTATCCTCTTATGGTTAATGGAAGTGTTGCATCATGTTTAAGAGAGCGGAC
AGATGGACAATCCCCTCTTGATTGGCCAGCAAGGAAACAAATTGCATTGGGATCTGCAAG
GGGGCTTGCTTATTTGCATGATTCTTGTGACCCTAAGGTAATTCATCGTGATGTGAAGGC
AGCAAACATACTGTTGGATGAAGAGTTTGAAGCAGTGGTTGCAGATTTTGGGCCGGCTAA
ACTCATGGACTACAATGATACTCATGTTACCACAGCTGTACATGGAACACTTGGGCATAT
TGCACCAGAGTACCTCTCCACTGGAAGGTCTTCAGAGAAGACTGATGTTTATGGATATGG
GATCATGCTTCTTGAGCTCATCACTGGGCAGAGGGCTTTTGATCTTGCTCGGTTAGCCGG
TAATGAGGACGTTATGTTACTCAGTTGGGTTAAGGAACTGTTGAACAACAAGAAGTTGGA
AACACTGGTTGATTCCAAGCTGCAGGGCAATTACATTGTGGAGGAGGTAGAGGAGCTAAT
CCAGGTGGCTCTCCTTTGCACACTAGATGCAGCTTCAGACCGACCCAAGATGTCAGATGT
GGTTAAAATGCTTGAAGGTGATGGTTTAGCTGAAAGGTGGGAACAGTGGCAAAAGAAGGA
TATAATTTGCGGAGAGCAAAATCATAGCAACTTCCCCTCTAATAATTGGATTATAAATGA
CTCCACTCCAGGCCTTCGTCCTGAAGAATTGTCCGGTCCCAGATGA