Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0055g01020.t01
CDS Infomation

cds chromosome:12X:12:14508797:14509957:1 gene:VIT_12s0055g01020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxidase [Source:UniProtKB/TrEMBL;Acc:F6H1N4]
Sequence

ATGGCTGCTGCATTGGTGCAAGGCCAAGGCACTCGGGTTGGCTTCTATTCTCGTACATGT
CCTCAAGCTGAATCCATTGTTCAGAAAACTGTTCAGTCTCATTTCCAATCCAATCCAGCC
ATTGCCCCTGGCCTGCTTCGCATGCACTTTCATGACTGTTTTGTCAGGGGCTGTGATGCT
TCTATCCTTATAAATGGAACTTCCACCGAGAAAACAACAGTACCGAACAGTCTGATAAAT
GGATATGATGTTATTGATGATGCCAAGACCCAGCTCGAAGCCGCTTGCCCTGGAGTGGTC
TCTTGCGCTGATATTCTTGCCCTCGCTGCCCGCGACTCTGTGGTTCTGACTAAAGGACTA
ACGTGGAAAGTGCCTACGGGACGTAGAGATGGGCGAGTTTCATTGGCATCTGATGTTAAC
AATTTGCCTAGCCCTCGCGACTCTATTGAAGCCCAAAAGCAGAAGTTTGCTGACAAGGGT
CTCACTGATCAAGATCTCGTTACTCTTGTTGGAGGACACACCATTGGAACTTCAGCATGC
CAATTCTTCAGTTATAGACTATACAACTTCAGTACCACGACTGCAAATGGTGCTGACCCT
TCCATGGATGCCACATTCGTAACTCAGCTACAAGCCCTCTGCCCAGCTGATGGCGATGGG
AGCAGGCGCATTGCACTGGACACTGGTAGCTCAAACACATTTGACGCATCTTTCTTTACA
AACTTGAAGAATGGACGTGGAGTACTGGAGTCTGATCAGAAGTTATGGACGGATGCTTCC
ACCAAAACTTTTGTTCAGCGCTTCCTGGGGGTTAGAGGGCTGCTTGGGTTGAACTTCAAC
GTTGAGTTTGGGAGGTCTATGGTGAGGATGAGCAACATTGGGGTGCAGACAGGGACTGAG
GGTGAAATTCGCAGAGTGTGTACAGCAATTAATTAA

Peptide Sequence

PEP ID

VIT_12s0055g01020.t01
PEP Infomation

pep chromosome:12X:12:14508797:14509957:1 gene:VIT_12s0055g01020 transcript:VIT_12s0055g01020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxidase [Source:UniProtKB/TrEMBL;Acc:F6H1N4]
Sequence

MAAALVQGQGTRVGFYSRTCPQAESIVQKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDA
SILINGTSTEKTTVPNSLINGYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTKGL
TWKVPTGRRDGRVSLASDVNNLPSPRDSIEAQKQKFADKGLTDQDLVTLVGGHTIGTSAC
QFFSYRLYNFSTTTANGADPSMDATFVTQLQALCPADGDGSRRIALDTGSSNTFDASFFT
NLKNGRGVLESDQKLWTDASTKTFVQRFLGVRGLLGLNFNVEFGRSMVRMSNIGVQTGTE
GEIRRVCTAIN

Transcript Sequence

Transcript ID

VIT_12s0055g01020.t01
Transcript Infomation

cdna chromosome:12X:12:14508797:14509957:1 gene:VIT_12s0055g01020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxidase [Source:UniProtKB/TrEMBL;Acc:F6H1N4]
Sequence

CACCCACATTGTTCTTTCTCTGGTTCTCCATGGCTGCTGCATTGGTGCAAGGCCAAGGCA
CTCGGGTTGGCTTCTATTCTCGTACATGTCCTCAAGCTGAATCCATTGTTCAGAAAACTG
TTCAGTCTCATTTCCAATCCAATCCAGCCATTGCCCCTGGCCTGCTTCGCATGCACTTTC
ATGACTGTTTTGTCAGGGGCTGTGATGCTTCTATCCTTATAAATGGAACTTCCACCGAGA
AAACAACAGTACCGAACAGTCTGATAAATGGATATGATGTTATTGATGATGCCAAGACCC
AGCTCGAAGCCGCTTGCCCTGGAGTGGTCTCTTGCGCTGATATTCTTGCCCTCGCTGCCC
GCGACTCTGTGGTTCTGACTAAAGGACTAACGTGGAAAGTGCCTACGGGACGTAGAGATG
GGCGAGTTTCATTGGCATCTGATGTTAACAATTTGCCTAGCCCTCGCGACTCTATTGAAG
CCCAAAAGCAGAAGTTTGCTGACAAGGGTCTCACTGATCAAGATCTCGTTACTCTTGTTG
GAGGACACACCATTGGAACTTCAGCATGCCAATTCTTCAGTTATAGACTATACAACTTCA
GTACCACGACTGCAAATGGTGCTGACCCTTCCATGGATGCCACATTCGTAACTCAGCTAC
AAGCCCTCTGCCCAGCTGATGGCGATGGGAGCAGGCGCATTGCACTGGACACTGGTAGCT
CAAACACATTTGACGCATCTTTCTTTACAAACTTGAAGAATGGACGTGGAGTACTGGAGT
CTGATCAGAAGTTATGGACGGATGCTTCCACCAAAACTTTTGTTCAGCGCTTCCTGGGGG
TTAGAGGGCTGCTTGGGTTGAACTTCAACGTTGAGTTTGGGAGGTCTATGGTGAGGATGA
GCAACATTGGGGTGCAGACAGGGACTGAGGGTGAAATTCGCAGAGTGTGTACAGCAATTA
ATTAACTGAT