Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0055g01000.t01
CDS Infomation

cds chromosome:12X:12:14468588:14469732:1 gene:VIT_12s0055g01000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxidase [Source:UniProtKB/TrEMBL;Acc:F6H1N2]
Sequence

ATGGCTGCTGCATTGGTGCAAGGCCAAGGCACTCGGGTTGGCTTCTATTCTCGTACATGT
CCTCCAGCTGAATCCATTGTTCAGAAAACTGTCCAGTCTCATTTCCAATCCAATCCAGCC
ATTGCCCCTGGCCTGCTTCGCATGCACTTTCATGACTGTTTTGTCAGGGGCTGTGATGCT
TCTATCCTTATAAATGGAACTTCCACCGAGAAAACAACCGTACCAAACAGTCTGTTAAAT
GGATATGATGTTATTGATGATGCCAAGACCCAGCTCGAAGCTGCTTGCCCTGGAGTGGTC
TCTTGCGCTGATATTCTTGCCCTCGCTGCCCGCGACTCTGTGGTTCTGACTAAAGGACTA
ACGTGGAAAGTGCCTACGGGACGTAGAGATGGGCGAGTTTCACTGGCATCTGATGTTAAC
AATTTGCCCAGCCCTCGAGACTCTATTGAAGCCCAAAAGCAAAAGTTTGCTGACAAGGGT
CTCACTGATCAAGATCTCGTTACTCTTGTTGGAGGACACACCATTGGAACTTCAGCATGC
CAATTTTTCAGATACAGGCTATACAACTTCAGTACCACGACTGCAAATGGTGCTGACCCT
TCTATGGATGCTAAATTCGTAACTCAGCTACAAGCCCTCTGTCCATCTGATGGCGATGGG
AGTAAGCGCATTGCACTAGACACTGGTAGCCCAAACAGATTTGACGCAACCTTCTTTACA
AACTTGAAGAATGGACGTGGAGTGCTGGAGTCTGATCAGAAGTTATGGACGGATGCTTCC
ACCAGAACTTTTGTTCAGCGCTTCCTGGGAGTTAGAGGGCTGCGTGGGTTGAACTTCAAT
GTTGAGTTTGGGAGGTCTATGGTGAAGATGAGCAACATTGGGGTGAAGACTGGGACTGAG
GGTGAAATTCGCAGAGTGTGTACTGCAATTAATTAA

Peptide Sequence

PEP ID

VIT_12s0055g01000.t01
PEP Infomation

pep chromosome:12X:12:14468588:14469732:1 gene:VIT_12s0055g01000 transcript:VIT_12s0055g01000.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxidase [Source:UniProtKB/TrEMBL;Acc:F6H1N2]
Sequence

MAAALVQGQGTRVGFYSRTCPPAESIVQKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDA
SILINGTSTEKTTVPNSLLNGYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTKGL
TWKVPTGRRDGRVSLASDVNNLPSPRDSIEAQKQKFADKGLTDQDLVTLVGGHTIGTSAC
QFFRYRLYNFSTTTANGADPSMDAKFVTQLQALCPSDGDGSKRIALDTGSPNRFDATFFT
NLKNGRGVLESDQKLWTDASTRTFVQRFLGVRGLRGLNFNVEFGRSMVKMSNIGVKTGTE
GEIRRVCTAIN

Transcript Sequence

Transcript ID

VIT_12s0055g01000.t01
Transcript Infomation

cdna chromosome:12X:12:14468588:14469732:1 gene:VIT_12s0055g01000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxidase [Source:UniProtKB/TrEMBL;Acc:F6H1N2]
Sequence

CTTTCTCTGGTTCTCCATGGCTGCTGCATTGGTGCAAGGCCAAGGCACTCGGGTTGGCTT
CTATTCTCGTACATGTCCTCCAGCTGAATCCATTGTTCAGAAAACTGTCCAGTCTCATTT
CCAATCCAATCCAGCCATTGCCCCTGGCCTGCTTCGCATGCACTTTCATGACTGTTTTGT
CAGGGGCTGTGATGCTTCTATCCTTATAAATGGAACTTCCACCGAGAAAACAACCGTACC
AAACAGTCTGTTAAATGGATATGATGTTATTGATGATGCCAAGACCCAGCTCGAAGCTGC
TTGCCCTGGAGTGGTCTCTTGCGCTGATATTCTTGCCCTCGCTGCCCGCGACTCTGTGGT
TCTGACTAAAGGACTAACGTGGAAAGTGCCTACGGGACGTAGAGATGGGCGAGTTTCACT
GGCATCTGATGTTAACAATTTGCCCAGCCCTCGAGACTCTATTGAAGCCCAAAAGCAAAA
GTTTGCTGACAAGGGTCTCACTGATCAAGATCTCGTTACTCTTGTTGGAGGACACACCAT
TGGAACTTCAGCATGCCAATTTTTCAGATACAGGCTATACAACTTCAGTACCACGACTGC
AAATGGTGCTGACCCTTCTATGGATGCTAAATTCGTAACTCAGCTACAAGCCCTCTGTCC
ATCTGATGGCGATGGGAGTAAGCGCATTGCACTAGACACTGGTAGCCCAAACAGATTTGA
CGCAACCTTCTTTACAAACTTGAAGAATGGACGTGGAGTGCTGGAGTCTGATCAGAAGTT
ATGGACGGATGCTTCCACCAGAACTTTTGTTCAGCGCTTCCTGGGAGTTAGAGGGCTGCG
TGGGTTGAACTTCAATGTTGAGTTTGGGAGGTCTATGGTGAAGATGAGCAACATTGGGGT
GAAGACTGGGACTGAGGGTGAAATTCGCAGAGTGTGTACTGCAATTAATTAA