Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0055g00830.t01
CDS Infomation

cds chromosome:12X:12:14161171:14175995:-1 gene:VIT_12s0055g00830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGGTATTTGTGCGTGTTCTACCACAGATTGTTGGATTACAGGAAAGCAGAAGTGGAA
TCCCTAGCTCATCTATTTGGGGTTCTGGAAGATGGCTCTGCTCTTCAATGGAAGCTTCCC
CAGCACCACCACCCTGATTCCCCTTTCCATTTTGTTTATCTCCCTTCCGAGGATGTGGCC
AGGAACATCGCTAATCGAAGCATACTTGTGAAGGGAATCTATGAACTTTGGGGAGAAGGA
AGCAGCTATGAGGAACTGGAAGAGGCTATAAGAAGTTATCCTGATGAGCGTAAGCTGCCA
TACTTGGCTGCTGAAAGCACATTCAAGATTACTGTTGATAGTTTTGGGAAGGTTATCAGC
TTTCAAGAGCAAAATGATCGTATTCAGGGGCTGACTTATATTCCTTTCAAGGGTCGAGTG
AACTTAAAAAATCCAGAACACAAGTTTTGGCTTATAGAAACTGATGACTATGGGTCTAAT
AATGGGCTTCCACCTGTAGTCCAAAAGAGAATCTTTTTTGGTCGGGAGGTTGGTGCTGCT
GATAGGAAGCTTTTGCCCACCTATCAATTAAAAAGCCGCACTTATCTTGGCCCAACAGCC
ATGGATGCAGAAATGGCTTTCTTAATGGCCAACCAAGCACTGGCCACAGCAGGGAAACTT
GTGTATGATCCTTTTGTTGGAACTGGGAGCATTCTTGTTGCTGCAGCACACTTTGGTGCA
ATGACAATGGGTGCAGATATTGACATTAGGGTAGTCCGTGATGGGCGTGGACCTGACTGT
AATGTTTGGAGCAATTTCAAGCAGTATCACTTACCAATGCCAATTTCTCTGTTGAGGGCA
GATAATAACCTTACTCCCTGGCGTCCTGGATTAAAAGAGGTATTTGATGCCATAATCTGT
GACCCTCCTTATGGAGTTCGTGCTGGTGGACGGAAATCTGGTGGACGGAAACTCCTAAAG
GGTGTTATAAGCCCCTACACTGTTCCAGATGACAAGAGGACAGATCATATACCATCAACA
GCAGCCTACAGCTTAGCTGAGTGTGTGCACGATTTGCTCGACGTTGCTGCTAAGATGCTT
GTAATGGGTGGCAGGCTTGTGTACTTCTATCCTGTACTAAGAGAAGATGATTCAACCGAG
ACCCATTTCCCAGAGCATCCATGTTTCAAACTAATTGCCACATGTGAACAGATTCTAAGC
TTACGTTACAGCAGAGTCTTACTGACAATGGTGAAGATAGGACCATACACTGAAGAAATT
GCAGAAACAGCTAGGTTAAAACATTTAGAGTTCAAGGAGAACCATCTGAAGTGGTTGGAG
GAGGGTAATCTTCATGCTGCTGTTTTTAGTAGTGCTGACCCTCAGTTGGGTGATGCAGGC
GATTCCAAATCCAGTAAAGACTCCAAACCAAAGTACAGAGGGAAATACGTGTAG

Peptide Sequence

PEP ID

VIT_12s0055g00830.t01
PEP Infomation

pep chromosome:12X:12:14161171:14175995:-1 gene:VIT_12s0055g00830 transcript:VIT_12s0055g00830.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MWYLCVFYHRLLDYRKAEVESLAHLFGVLEDGSALQWKLPQHHHPDSPFHFVYLPSEDVA
RNIANRSILVKGIYELWGEGSSYEELEEAIRSYPDERKLPYLAAESTFKITVDSFGKVIS
FQEQNDRIQGLTYIPFKGRVNLKNPEHKFWLIETDDYGSNNGLPPVVQKRIFFGREVGAA
DRKLLPTYQLKSRTYLGPTAMDAEMAFLMANQALATAGKLVYDPFVGTGSILVAAAHFGA
MTMGADIDIRVVRDGRGPDCNVWSNFKQYHLPMPISLLRADNNLTPWRPGLKEVFDAIIC
DPPYGVRAGGRKSGGRKLLKGVISPYTVPDDKRTDHIPSTAAYSLAECVHDLLDVAAKML
VMGGRLVYFYPVLREDDSTETHFPEHPCFKLIATCEQILSLRYSRVLLTMVKIGPYTEEI
AETARLKHLEFKENHLKWLEEGNLHAAVFSSADPQLGDAGDSKSSKDSKPKYRGKYV

Transcript Sequence

Transcript ID

VIT_12s0055g00830.t01
Transcript Infomation

cdna chromosome:12X:12:14161171:14175995:-1 gene:VIT_12s0055g00830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTCCGAGCCCACAATAGTCCCTGCCTCCTCCTGTGGTGGAATCCCCTTTTTTTTTTGCT
TGTTTGGTTGGAGAGAAAATGTGGTATTTGTGCGTGTTCTACCACAGATTGTTGGATTAC
AGGAAAGCAGAAGTGGAATCCCTAGCTCATCTATTTGGGGTTCTGGAAGATGGCTCTGCT
CTTCAATGGAAGCTTCCCCAGCACCACCACCCTGATTCCCCTTTCCATTTTGTTTATCTC
CCTTCCGAGGATGTGGCCAGGAACATCGCTAATCGAAGCATACTTGTGAAGGGAATCTAT
GAACTTTGGGGAGAAGGAAGCAGCTATGAGGAACTGGAAGAGGCTATAAGAAGTTATCCT
GATGAGCGTAAGCTGCCATACTTGGCTGCTGAAAGCACATTCAAGATTACTGTTGATAGT
TTTGGGAAGGTTATCAGCTTTCAAGAGCAAAATGATCGTATTCAGGGGCTGACTTATATT
CCTTTCAAGGGTCGAGTGAACTTAAAAAATCCAGAACACAAGTTTTGGCTTATAGAAACT
GATGACTATGGGTCTAATAATGGGCTTCCACCTGTAGTCCAAAAGAGAATCTTTTTTGGT
CGGGAGGTTGGTGCTGCTGATAGGAAGCTTTTGCCCACCTATCAATTAAAAAGCCGCACT
TATCTTGGCCCAACAGCCATGGATGCAGAAATGGCTTTCTTAATGGCCAACCAAGCACTG
GCCACAGCAGGGAAACTTGTGTATGATCCTTTTGTTGGAACTGGGAGCATTCTTGTTGCT
GCAGCACACTTTGGTGCAATGACAATGGGTGCAGATATTGACATTAGGGTAGTCCGTGAT
GGGCGTGGACCTGACTGTAATGTTTGGAGCAATTTCAAGCAGTATCACTTACCAATGCCA
ATTTCTCTGTTGAGGGCAGATAATAACCTTACTCCCTGGCGTCCTGGATTAAAAGAGGTA
TTTGATGCCATAATCTGTGACCCTCCTTATGGAGTTCGTGCTGGTGGACGGAAATCTGGT
GGACGGAAACTCCTAAAGGGTGTTATAAGCCCCTACACTGTTCCAGATGACAAGAGGACA
GATCATATACCATCAACAGCAGCCTACAGCTTAGCTGAGTGTGTGCACGATTTGCTCGAC
GTTGCTGCTAAGATGCTTGTAATGGGTGGCAGGCTTGTGTACTTCTATCCTGTACTAAGA
GAAGATGATTCAACCGAGACCCATTTCCCAGAGCATCCATGTTTCAAACTAATTGCCACA
TGTGAACAGATTCTAAGCTTACGTTACAGCAGAGTCTTACTGACAATGGTGAAGATAGGA
CCATACACTGAAGAAATTGCAGAAACAGCTAGGTTAAAACATTTAGAGTTCAAGGAGAAC
CATCTGAAGTGGTTGGAGGAGGGTAATCTTCATGCTGCTGTTTTTAGTAGTGCTGACCCT
CAGTTGGGTGATGCAGGCGATTCCAAATCCAGTAAAGACTCCAAACCAAAGTACAGAGGG
AAATACGTGTAGTTTCTATCTTTAGACTGTATTCTTTGAGCTGTTTAGCTTCGAGTACTT
GCGGCCCAATAGGTGATTATGAGTCATGGGAACATCAGCTATTTTTGTATCGATGAGTAT
TGTGTAAGGCTTTTTTTTTTCATTGCTATGCTAACTCCCCCATTGCTTCTGGGAATTCTG
ACTTCATTTACTTGATAACTGATTCCTCACATATCAGTAGGCCAGCTTTCCTTGTATG