Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0055g00500.t01
CDS Infomation

cds chromosome:12X:12:13486775:13488712:-1 gene:VIT_12s0055g00500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGGCGTTCTGCTTGTGTCTCAGCCTCCTCTTTTTAGGCTTTGTGAGTTCAGACACC
AGTTTTGTGTACAATGGCTTCCTTAAAGCAGATTTGAGCTTGGATGGAGCATCCCAGCTG
AGATCCAATGGTATACTCTCCTTAACCAATGATTCTGTAAGGCTCATAGGCCATGCTTTC
TATCCATCTCCCATACATTTCAAGAGAAGCAAAGACCACAGGTCATGGGTCGTCACATTT
AGCACCAACTTTGTCTTCTCCATGGCTCCCAAGTATCCTGGCCTCGGAGGTCATGGTCTG
GCCTTTGTTCTCTTGTCCACCAAGGCGCCCATGGGTTGTCTTCCAAACCAGTACCTGGGA
CTCCCAAATGTTACTAGCAATGCAGATTTCTCGACTCGGGTGCTTGCCGTCGAGTTTGAT
GCTGTCCAAAATCTTGAGCTCATGGATATCAATGATAACCATGTAGGAATAGATATATCC
AGCTTGATCTCTAATGTTTCTAAGCCAGCTGCTTATTATTTCACCAACAACAGCAATAAC
TCCATTGCTTTCAAGAGTGGAGATCCTATTCAGGCCTGGATTGAGTACAATAGCCAGGAG
CAGTTGATGAATGTTACCATTTCTCCTCTTGGCATTCCCAAGTCGTTTCGGCCATTGATA
TCGTTCCCCATTGACCTGTCAATGGTGCTGAACGAATACATGTACATTGGCTTCTCAGCT
TCCACTGGCCTGCTCACAGCCGCTCATAACGTGCATGGTTGGAGCTTCAGGATTGGAGGA
AGGGCAGCAGACTTGGATCCTCTCCGGCTCCCATCTCCAGTGACAAGGTCCCGAAAGGTT
CTGCATCAAAGGGGACTCACCCTAGGTATCATTTTAGCTAGTGCTACTCTAGTTATCTTG
GTGATTTCTGGCACTGCTCATGTCGTACATAGGATTAGGAACAAGGAGGAAGTCTTAGAA
GAATGGGAAGTTGAATATGGAGCTCACAGATTCAAGTATTCTGATCTCTTCTCTGCTACT
AGGGGGTTTAGAGAGAAAAATCTAATTGGGTCTGGAGGATTTGGGAGAGTCTACAAGGGG
ATAATCCCCAGAACAGGGCTAGAAGTTGCAATAAAGAGGGTTGCTCATGACTCCCGACAA
GGAATGAAAGAATTTGTTGCAGAAATAATAAGCATGGGACGACTTAGGCACCGAAACTTG
GTGCAGTTACATGGATGGTGCCGAAGGCAAGATGAGCTTATCCTTGTTTATGACTATGTA
CCAAATGGAAGCCTGGACAAGATCCTGTTTGATGACCAACAGAAAAAGAAAATACTGACT
TGGGAGCAAAGATACAAGATCCTCATTGGTGTTTCACAAGCTTTGCTCTATCTCCATGAA
GAATGTGATCAAAGAGTGGTTCACAGAGATGTGAAGCCGAGCAATGTTCTCATAGACGCA
GAACTCAATGCCAGGCTTGGGGATTTTGGCCTGGCCAGGATGTACAAACATGGAAACAAT
CCAGAGACGACTCACATTGTAGGAACACTTGGGTACCTAGCCCCTGAGCTCACTAGAATT
GGGAAGGCCACAACAAGCATAGATGTGTATGCTTATGGTGTGCTCATGCTAGAAGTAGCT
ACAGGAAGGAGGCCAATTGAGCCCCAGAGGAATGCCCAGGAACTGGTATTGATGGACTGG
GTAAGGGAGCTACATTCCAGAGGAGAGATCCTGAGTGTCATCGATCCCACGTTGGATGAG
TACAACCCAGATGAAGCCAAGCTTGTTCTTAGTCTTGGCCTGCTTTGCTCTCATCCCCAT
CCTGATTACAGGCCAGATATAAGAAGGGTTATCCAATACCTCCTGAAGGATGTTTGCCTT
CCTGAGCTACCTCCTGATGTTCACCTAGAAGTTCCAGGGACAATGATAGAATTCTCAGAT
ACTTACCCTGATGCATGA

Peptide Sequence

PEP ID

VIT_12s0055g00500.t01
PEP Infomation

pep chromosome:12X:12:13486775:13488712:-1 gene:VIT_12s0055g00500 transcript:VIT_12s0055g00500.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKAFCLCLSLLFLGFVSSDTSFVYNGFLKADLSLDGASQLRSNGILSLTNDSVRLIGHAF
YPSPIHFKRSKDHRSWVVTFSTNFVFSMAPKYPGLGGHGLAFVLLSTKAPMGCLPNQYLG
LPNVTSNADFSTRVLAVEFDAVQNLELMDINDNHVGIDISSLISNVSKPAAYYFTNNSNN
SIAFKSGDPIQAWIEYNSQEQLMNVTISPLGIPKSFRPLISFPIDLSMVLNEYMYIGFSA
STGLLTAAHNVHGWSFRIGGRAADLDPLRLPSPVTRSRKVLHQRGLTLGIILASATLVIL
VISGTAHVVHRIRNKEEVLEEWEVEYGAHRFKYSDLFSATRGFREKNLIGSGGFGRVYKG
IIPRTGLEVAIKRVAHDSRQGMKEFVAEIISMGRLRHRNLVQLHGWCRRQDELILVYDYV
PNGSLDKILFDDQQKKKILTWEQRYKILIGVSQALLYLHEECDQRVVHRDVKPSNVLIDA
ELNARLGDFGLARMYKHGNNPETTHIVGTLGYLAPELTRIGKATTSIDVYAYGVLMLEVA
TGRRPIEPQRNAQELVLMDWVRELHSRGEILSVIDPTLDEYNPDEAKLVLSLGLLCSHPH
PDYRPDIRRVIQYLLKDVCLPELPPDVHLEVPGTMIEFSDTYPDA

Transcript Sequence

Transcript ID

VIT_12s0055g00500.t01
Transcript Infomation

cdna chromosome:12X:12:13486775:13488712:-1 gene:VIT_12s0055g00500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGGCGTTCTGCTTGTGTCTCAGCCTCCTCTTTTTAGGCTTTGTGAGTTCAGACACC
AGTTTTGTGTACAATGGCTTCCTTAAAGCAGATTTGAGCTTGGATGGAGCATCCCAGCTG
AGATCCAATGGTATACTCTCCTTAACCAATGATTCTGTAAGGCTCATAGGCCATGCTTTC
TATCCATCTCCCATACATTTCAAGAGAAGCAAAGACCACAGGTCATGGGTCGTCACATTT
AGCACCAACTTTGTCTTCTCCATGGCTCCCAAGTATCCTGGCCTCGGAGGTCATGGTCTG
GCCTTTGTTCTCTTGTCCACCAAGGCGCCCATGGGTTGTCTTCCAAACCAGTACCTGGGA
CTCCCAAATGTTACTAGCAATGCAGATTTCTCGACTCGGGTGCTTGCCGTCGAGTTTGAT
GCTGTCCAAAATCTTGAGCTCATGGATATCAATGATAACCATGTAGGAATAGATATATCC
AGCTTGATCTCTAATGTTTCTAAGCCAGCTGCTTATTATTTCACCAACAACAGCAATAAC
TCCATTGCTTTCAAGAGTGGAGATCCTATTCAGGCCTGGATTGAGTACAATAGCCAGGAG
CAGTTGATGAATGTTACCATTTCTCCTCTTGGCATTCCCAAGTCGTTTCGGCCATTGATA
TCGTTCCCCATTGACCTGTCAATGGTGCTGAACGAATACATGTACATTGGCTTCTCAGCT
TCCACTGGCCTGCTCACAGCCGCTCATAACGTGCATGGTTGGAGCTTCAGGATTGGAGGA
AGGGCAGCAGACTTGGATCCTCTCCGGCTCCCATCTCCAGTGACAAGGTCCCGAAAGGTT
CTGCATCAAAGGGGACTCACCCTAGGTATCATTTTAGCTAGTGCTACTCTAGTTATCTTG
GTGATTTCTGGCACTGCTCATGTCGTACATAGGATTAGGAACAAGGAGGAAGTCTTAGAA
GAATGGGAAGTTGAATATGGAGCTCACAGATTCAAGTATTCTGATCTCTTCTCTGCTACT
AGGGGGTTTAGAGAGAAAAATCTAATTGGGTCTGGAGGATTTGGGAGAGTCTACAAGGGG
ATAATCCCCAGAACAGGGCTAGAAGTTGCAATAAAGAGGGTTGCTCATGACTCCCGACAA
GGAATGAAAGAATTTGTTGCAGAAATAATAAGCATGGGACGACTTAGGCACCGAAACTTG
GTGCAGTTACATGGATGGTGCCGAAGGCAAGATGAGCTTATCCTTGTTTATGACTATGTA
CCAAATGGAAGCCTGGACAAGATCCTGTTTGATGACCAACAGAAAAAGAAAATACTGACT
TGGGAGCAAAGATACAAGATCCTCATTGGTGTTTCACAAGCTTTGCTCTATCTCCATGAA
GAATGTGATCAAAGAGTGGTTCACAGAGATGTGAAGCCGAGCAATGTTCTCATAGACGCA
GAACTCAATGCCAGGCTTGGGGATTTTGGCCTGGCCAGGATGTACAAACATGGAAACAAT
CCAGAGACGACTCACATTGTAGGAACACTTGGGTACCTAGCCCCTGAGCTCACTAGAATT
GGGAAGGCCACAACAAGCATAGATGTGTATGCTTATGGTGTGCTCATGCTAGAAGTAGCT
ACAGGAAGGAGGCCAATTGAGCCCCAGAGGAATGCCCAGGAACTGGTATTGATGGACTGG
GTAAGGGAGCTACATTCCAGAGGAGAGATCCTGAGTGTCATCGATCCCACGTTGGATGAG
TACAACCCAGATGAAGCCAAGCTTGTTCTTAGTCTTGGCCTGCTTTGCTCTCATCCCCAT
CCTGATTACAGGCCAGATATAAGAAGGGTTATCCAATACCTCCTGAAGGATGTTTGCCTT
CCTGAGCTACCTCCTGATGTTCACCTAGAAGTTCCAGGGACAATGATAGAATTCTCAGAT
ACTTACCCTGATGCATGA