Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0055g00460.t01
CDS Infomation

cds chromosome:12X:12:13356579:13361135:-1 gene:VIT_12s0055g00460 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:F6H1R9]
Sequence

ATGTCGTTCCGCAGCATAGTTCGTGATGTGAGGGATGGGTTTGGCAGCTTATCTCGGAGG
AGTTTTGATGTCAGGTTGCTGGGGCATAGTAGGGGTAAATCTATTGGTTCATTTCACGAG
ATGCATGATCAGCCTCTGGTAATTCAAAATAGCCGTTGGGCTAACCTGCCTCCAGAGCTG
CTTTATGATATTATTAAGAGGCTGGAGGAGAGTGAGAGTACATGGCCGTCTCGAAAACAT
GTTGTTGCATGCGCTGCTGTTTGCCGGTCATGGAGGACTATGTGTAAAGAAATTGTTAGA
AGTCCAGAGTTTTGTGCCAAACTTACCTTTCCAGTGTCCCTGAAGCAGCCAGGGCCACGT
GATGGGACTATCCAATGCTTCATCAAAAGGGATAAATCTAACTTAACTTACCACCTTTTT
CTATGTCTTAGCCCTGCTTTGCTAGTTGAAAATGGGAAGTTCCTTCTTTCTGCAAAAAGG
AATCGCCGGACAACTTGCACAGAGTATGTTATCTCCATGGATGCTGAGAACATTTCAAGG
TCAAGCAGCACTTACATTGGAAAACTGAGGTCGAATTTCCTTGGAACAAAATTCATAATA
TATGACACACAGCCTCCACATACCTGTGCACATATTCCTCCTCCAGGGAGAACAAGCAAA
AGATTTTATTCCAAGAAGGTCTCGCCAAAAGTTCCAACTGGCAGCTACAACATTGCCCAT
ATCACTTATGAACTGAATGTGCTGGGCACCCGTGGCCCACGACGGATGCATTGCACTATG
CACTCAATCCCGGCCTCATCACTAGATGCAGGAGGAAGTGTTCCAGGTCAGCCAGAGCTC
CTTCCCCGTGCTCTTGAAGACTCGTTCAGGAGCATCTCCTTCTCAAATTCACTGGACCAC
TCTGTTGAGTTCAGCAGCTCTCGATTTTCTGAGGTTTGTGGACCATGTGATGACGAAGAG
GGTAAAGCGAGGCCCTTGGTTCTTAAAAACAAGGCTCCAAGATGGCACGAGCAATTACAA
TGCTGGTGCCTGAACTTCCGGGGGCGAGTAACGGTTGCATCAGTGAAGAACTTTCAGTTG
ATTGCAGCCACACAGCCAGCCGCTGGTGCACCCACACCATCTCAACCAGCCCCACCAGAG
CATGACAAGATCATTCTCCAGTTTGGAAAAGTCGGGAAAGACATGTTCACTATGGATTAT
CGCTACCCTCTGTCTGCCTTTCAGGCATTTGCCATCTGCTTGAGCAGCTTTGACACCAAA
TTAGCATGTGAATAG

Peptide Sequence

PEP ID

VIT_12s0055g00460.t01
PEP Infomation

pep chromosome:12X:12:13356579:13361135:-1 gene:VIT_12s0055g00460 transcript:VIT_12s0055g00460.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:F6H1R9]
Sequence

MSFRSIVRDVRDGFGSLSRRSFDVRLLGHSRGKSIGSFHEMHDQPLVIQNSRWANLPPEL
LYDIIKRLEESESTWPSRKHVVACAAVCRSWRTMCKEIVRSPEFCAKLTFPVSLKQPGPR
DGTIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRNRRTTCTEYVISMDAENISR
SSSTYIGKLRSNFLGTKFIIYDTQPPHTCAHIPPPGRTSKRFYSKKVSPKVPTGSYNIAH
ITYELNVLGTRGPRRMHCTMHSIPASSLDAGGSVPGQPELLPRALEDSFRSISFSNSLDH
SVEFSSSRFSEVCGPCDDEEGKARPLVLKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQL
IAATQPAAGAPTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTK
LACE

Transcript Sequence

Transcript ID

VIT_12s0055g00460.t01
Transcript Infomation

cdna chromosome:12X:12:13356579:13361135:-1 gene:VIT_12s0055g00460 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:F6H1R9]
Sequence

GAGAAAGAGCAGGTCTAGAGAGAGAAAGAGCTCTTGATGATTCAGCACCCCCTCTTCTTC
TGATTCTCTTCCTTTTTGCTTTTTCTCCTACAGATCTCCCCCATTGCTCACTCTCACCGT
TTTTTTTTCTTTTTTTTCCATTTTCCTCGGGGTGTTTTACCCGTCAAGCCTGGATTTTCC
CGGAAATGAGCGCTGAGATCTTGGTTGTCTTTCTTTGAAGCTGTGGAGCTCCGATCAGCT
ATTGGTTTCTGATTATCTACGTTCTCTTTGCGGGCAGCTAACCGCTAGCCATAAGTTAAA
TATAAGTCATCAGAGGGTTTTTCTGGAGAGAGATAATTCACCTGCTTGGAAGTGATTCAT
CTGCTGTTTTAGTGGCTTAAATGTCGTTCCGCAGCATAGTTCGTGATGTGAGGGATGGGT
TTGGCAGCTTATCTCGGAGGAGTTTTGATGTCAGGTTGCTGGGGCATAGTAGGGGTAAAT
CTATTGGTTCATTTCACGAGATGCATGATCAGCCTCTGGTAATTCAAAATAGCCGTTGGG
CTAACCTGCCTCCAGAGCTGCTTTATGATATTATTAAGAGGCTGGAGGAGAGTGAGAGTA
CATGGCCGTCTCGAAAACATGTTGTTGCATGCGCTGCTGTTTGCCGGTCATGGAGGACTA
TGTGTAAAGAAATTGTTAGAAGTCCAGAGTTTTGTGCCAAACTTACCTTTCCAGTGTCCC
TGAAGCAGCCAGGGCCACGTGATGGGACTATCCAATGCTTCATCAAAAGGGATAAATCTA
ACTTAACTTACCACCTTTTTCTATGTCTTAGCCCTGCTTTGCTAGTTGAAAATGGGAAGT
TCCTTCTTTCTGCAAAAAGGAATCGCCGGACAACTTGCACAGAGTATGTTATCTCCATGG
ATGCTGAGAACATTTCAAGGTCAAGCAGCACTTACATTGGAAAACTGAGGTCGAATTTCC
TTGGAACAAAATTCATAATATATGACACACAGCCTCCACATACCTGTGCACATATTCCTC
CTCCAGGGAGAACAAGCAAAAGATTTTATTCCAAGAAGGTCTCGCCAAAAGTTCCAACTG
GCAGCTACAACATTGCCCATATCACTTATGAACTGAATGTGCTGGGCACCCGTGGCCCAC
GACGGATGCATTGCACTATGCACTCAATCCCGGCCTCATCACTAGATGCAGGAGGAAGTG
TTCCAGGTCAGCCAGAGCTCCTTCCCCGTGCTCTTGAAGACTCGTTCAGGAGCATCTCCT
TCTCAAATTCACTGGACCACTCTGTTGAGTTCAGCAGCTCTCGATTTTCTGAGGTTTGTG
GACCATGTGATGACGAAGAGGGTAAAGCGAGGCCCTTGGTTCTTAAAAACAAGGCTCCAA
GATGGCACGAGCAATTACAATGCTGGTGCCTGAACTTCCGGGGGCGAGTAACGGTTGCAT
CAGTGAAGAACTTTCAGTTGATTGCAGCCACACAGCCAGCCGCTGGTGCACCCACACCAT
CTCAACCAGCCCCACCAGAGCATGACAAGATCATTCTCCAGTTTGGAAAAGTCGGGAAAG
ACATGTTCACTATGGATTATCGCTACCCTCTGTCTGCCTTTCAGGCATTTGCCATCTGCT
TGAGCAGCTTTGACACCAAATTAGCATGTGAATAGGAGGGGGAAAAAGA