Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0055g00430.t01
CDS Infomation

cds chromosome:12X:12:13309181:13340263:1 gene:VIT_12s0055g00430 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTTCGACGTCTCAGATGGTTCATTGGCATGAATCATAGAGCTGCTGCTTCTCCAAAG
AGATTGGCCAATGCGAAGCCCAAGCCGCCTCCTGCTATGTTGGAGACTGTACAAGAGATT
GCAATCTACATTCATAGGTTCCACAACCTCGACCTTTTTCAGCAAGGATGGTATCAGATT
AAGATTACTATGAGGTGGGAGGACGAGGAATTTGAGTTGCCGGGAACTCCGGCAAGAGTT
GTTCAGTATGAAGCTCCTGAATTGGGTCCAGAGGATGCATATGGAGTTTGGAGGATTGAT
GATACAGACAACAGTTTTTCAACACAACCTTTTCGCATCAGATATGCTAGACAGGATGTT
CTTCTATCTCTCATGATCTCTTTCAATCTATCTCTCAGAAAATATGAGGGCTTATCAACA
TCAGCTATTATTTTGAAGTTTGAGCTTATGTATGCTCCCATGTTGGAGAATGGGTCTGAG
TTACAGGCTTCTCTGGATGCATGCCCTGCTTCAGTTCATGAATTTCGGATTCCTCCTAAA
GCTCTTCTTGGATTGCATTCATATTGCCCCGTTCATTTTGATTCTTTCCATGCTGTGCTT
GTTGATATAAGCATACATATCACTCTGTTGAGAGCTGGTATTCATGCGCCTTCATCGAAG
GTACCCAGGTTTGGGATGGGTCATGTGGCTGATTTAAAACAGGTCTTTAAAGCATTATTT
GCTGCCCGTGACAGACTTCTTGAAGAGCTCCAGAAACTTAGCAAAGAGATTAATCAGACA
ATTGATTTGACTGATTTCATTTCCAAACTGAATGATACAAAGTTAATTCATACTTCTCTG
CAAGCAGATGTAGTTACTACAGATGCTCAACCTTCAGGACAAGTATCAGGCGAGCCACAA
AGTGGTCTTGAGAAAGCAAATGGTATTGTCGAATTGCGAAGTGATAGACCACTTAACTCC
TTATCTAAGGATGATTTGCTGAACTCTTTCCATTTACTTGGCAATCAAATTTTATATTTA
TGGAACACATTTCTGAATTTCCACAGGGCTAACAAAAAAAAGATACTGGAATTTCTGATT
GATGCATGGGCGAATGATCGGAGAGCTGAATGGTCAATATGGATGGTATACTCTAAGGTC
GAGATGCCTCATCATTATTTAAACAGTGTGATTGATGAGTCTTCCTTCCAGGGTGGCCGT
GGAAAAGTTCTCAGTTTGAAGAAGTTGACTGATGATCCTTCCCATACTGCAGCTATGCGT
GCGGAGCTTCATCGACGAAGTATTGCACAAATGAAGATCAACAACCAGTCAATTCAAGAC
ATGCACATATTTGGAGATCCTTCCCGTATTCCTATTATAATTGTAGAACGTGTTGTGAAT
GTGCCACGGCGTACTACCAGTGGAAATTCCTACTTCAGTCAACTGGACCAGAAAGATACA
CCTAACTTACTCACTGTCCCTCTCTTTAATGCTGTAAACAAGTCATCAGTTGCTAGCCCA
CAACAAAATGGACGTGTCTTGAAGATTGTTGTCTTTGTACACGGGTTTCAGGGACATCAT
CTGGACTTACGGCTTGTTCGGAATCAATGGCTATTGATAGATCCCAAGGCAGAGTTTCTT
ATGTCAGAGGAAAATGAAGACAAAACATCTGGGGACTTCAGAGAAATGGGACAAAGGCTG
GCTCAGGAAGTGGTTTCTTTTGTTAAAAGGAAAATGGATAAAGTCTCACGACATGGAACC
TTAAGAAATATCAAGCTTAGCTTTGTTGGGCATTCCATCGGAAATGTTATTATTAGAACT
GCATTGGCAGAGAGCTCTATGGAACCTTACCTAAGATACTTGCATACATATGTTTCTATA
TCTGGCCCACACTTGGGATATCTGTATAGTTCAAACTCTCTATTTAATTCTGGCTTGTGG
ATCTTGAAGAAGTTTAAAGGCACACAGTGTATTCATCAACTCACACTCACGGATGATCCA
GATCTTCAAAATACATTTTTCTACAAACTCTGCAAGCAAAAGACATTGGACAACTTCCAG
AATATAATATTGTTGTCTTCACCACAGGATGGTTATGTTCCATATCATTCTGCCAGAATC
GAATTGTGCCAGGGAGCTTCATGGGACTACTCAAAGAAGGGCAAAGTGTTTCTGGAGATG
CTGAATGAGTGCTTGGATCAGATACGAGGCCCCTCTGAGGGTCGAGTATTCATGCGGTGT
GATGTCAACTTTGATACCTCCAATCAAGGGAGGAACTTGAATACCATTATTGGGCGAGCT
GCTCATATTGAGTTCCTTGAAACTGACATCTTTGCAAGGTTCATAATGTGGTCTTTCCCA
GAACTATTTCGATAG

Peptide Sequence

PEP ID

VIT_12s0055g00430.t01
PEP Infomation

pep chromosome:12X:12:13309181:13340263:1 gene:VIT_12s0055g00430 transcript:VIT_12s0055g00430.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFRRLRWFIGMNHRAAASPKRLANAKPKPPPAMLETVQEIAIYIHRFHNLDLFQQGWYQI
KITMRWEDEEFELPGTPARVVQYEAPELGPEDAYGVWRIDDTDNSFSTQPFRIRYARQDV
LLSLMISFNLSLRKYEGLSTSAIILKFELMYAPMLENGSELQASLDACPASVHEFRIPPK
ALLGLHSYCPVHFDSFHAVLVDISIHITLLRAGIHAPSSKVPRFGMGHVADLKQVFKALF
AARDRLLEELQKLSKEINQTIDLTDFISKLNDTKLIHTSLQADVVTTDAQPSGQVSGEPQ
SGLEKANGIVELRSDRPLNSLSKDDLLNSFHLLGNQILYLWNTFLNFHRANKKKILEFLI
DAWANDRRAEWSIWMVYSKVEMPHHYLNSVIDESSFQGGRGKVLSLKKLTDDPSHTAAMR
AELHRRSIAQMKINNQSIQDMHIFGDPSRIPIIIVERVVNVPRRTTSGNSYFSQLDQKDT
PNLLTVPLFNAVNKSSVASPQQNGRVLKIVVFVHGFQGHHLDLRLVRNQWLLIDPKAEFL
MSEENEDKTSGDFREMGQRLAQEVVSFVKRKMDKVSRHGTLRNIKLSFVGHSIGNVIIRT
ALAESSMEPYLRYLHTYVSISGPHLGYLYSSNSLFNSGLWILKKFKGTQCIHQLTLTDDP
DLQNTFFYKLCKQKTLDNFQNIILLSSPQDGYVPYHSARIELCQGASWDYSKKGKVFLEM
LNECLDQIRGPSEGRVFMRCDVNFDTSNQGRNLNTIIGRAAHIEFLETDIFARFIMWSFP
ELFR

Transcript Sequence

Transcript ID

VIT_12s0055g00430.t01
Transcript Infomation

cdna chromosome:12X:12:13309181:13340263:1 gene:VIT_12s0055g00430 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGGATTTGGGGACCCAGATTTATATTCCGATTCCAAATCCAATTCCAACTCCAACCCAT
TGATCTTCTCCTGAATCAATTTCAATAGGTAGTGAGTGGTAGCATTGGTTTTGATCTTGA
TTTGTATTCAGAAGAAGCCGTGGGTTCATATACCTTCAAGCTTGGGGACGCATTTTTTCT
TTTTTCTGCGATGCCCTGCTACTGAAGAAATCGCATATATATCTTCTCCTTAATCTTCAG
AGCTCCATGGGCAAAGGCTTTGCCGCATGAAACTTGTGAACAGGGGATGCAAGTGTCGTG
GGAATTTGCTGGAGGAGAAGGTAAATGTTTCGACGTCTCAGATGGTTCATTGGCATGAAT
CATAGAGCTGCTGCTTCTCCAAAGAGATTGGCCAATGCGAAGCCCAAGCCGCCTCCTGCT
ATGTTGGAGACTGTACAAGAGATTGCAATCTACATTCATAGGTTCCACAACCTCGACCTT
TTTCAGCAAGGATGGTATCAGATTAAGATTACTATGAGGTGGGAGGACGAGGAATTTGAG
TTGCCGGGAACTCCGGCAAGAGTTGTTCAGTATGAAGCTCCTGAATTGGGTCCAGAGGAT
GCATATGGAGTTTGGAGGATTGATGATACAGACAACAGTTTTTCAACACAACCTTTTCGC
ATCAGATATGCTAGACAGGATGTTCTTCTATCTCTCATGATCTCTTTCAATCTATCTCTC
AGAAAATATGAGGGCTTATCAACATCAGCTATTATTTTGAAGTTTGAGCTTATGTATGCT
CCCATGTTGGAGAATGGGTCTGAGTTACAGGCTTCTCTGGATGCATGCCCTGCTTCAGTT
CATGAATTTCGGATTCCTCCTAAAGCTCTTCTTGGATTGCATTCATATTGCCCCGTTCAT
TTTGATTCTTTCCATGCTGTGCTTGTTGATATAAGCATACATATCACTCTGTTGAGAGCT
GGTATTCATGCGCCTTCATCGAAGGTACCCAGGTTTGGGATGGGTCATGTGGCTGATTTA
AAACAGGTCTTTAAAGCATTATTTGCTGCCCGTGACAGACTTCTTGAAGAGCTCCAGAAA
CTTAGCAAAGAGATTAATCAGACAATTGATTTGACTGATTTCATTTCCAAACTGAATGAT
ACAAAGTTAATTCATACTTCTCTGCAAGCAGATGTAGTTACTACAGATGCTCAACCTTCA
GGACAAGTATCAGGCGAGCCACAAAGTGGTCTTGAGAAAGCAAATGGTATTGTCGAATTG
CGAAGTGATAGACCACTTAACTCCTTATCTAAGGATGATTTGCTGAACTCTTTCCATTTA
CTTGGCAATCAAATTTTATATTTATGGAACACATTTCTGAATTTCCACAGGGCTAACAAA
AAAAAGATACTGGAATTTCTGATTGATGCATGGGCGAATGATCGGAGAGCTGAATGGTCA
ATATGGATGGTATACTCTAAGGTCGAGATGCCTCATCATTATTTAAACAGTGTGATTGAT
GAGTCTTCCTTCCAGGGTGGCCGTGGAAAAGTTCTCAGTTTGAAGAAGTTGACTGATGAT
CCTTCCCATACTGCAGCTATGCGTGCGGAGCTTCATCGACGAAGTATTGCACAAATGAAG
ATCAACAACCAGTCAATTCAAGACATGCACATATTTGGAGATCCTTCCCGTATTCCTATT
ATAATTGTAGAACGTGTTGTGAATGTGCCACGGCGTACTACCAGTGGAAATTCCTACTTC
AGTCAACTGGACCAGAAAGATACACCTAACTTACTCACTGTCCCTCTCTTTAATGCTGTA
AACAAGTCATCAGTTGCTAGCCCACAACAAAATGGACGTGTCTTGAAGATTGTTGTCTTT
GTACACGGGTTTCAGGGACATCATCTGGACTTACGGCTTGTTCGGAATCAATGGCTATTG
ATAGATCCCAAGGCAGAGTTTCTTATGTCAGAGGAAAATGAAGACAAAACATCTGGGGAC
TTCAGAGAAATGGGACAAAGGCTGGCTCAGGAAGTGGTTTCTTTTGTTAAAAGGAAAATG
GATAAAGTCTCACGACATGGAACCTTAAGAAATATCAAGCTTAGCTTTGTTGGGCATTCC
ATCGGAAATGTTATTATTAGAACTGCATTGGCAGAGAGCTCTATGGAACCTTACCTAAGA
TACTTGCATACATATGTTTCTATATCTGGCCCACACTTGGGATATCTGTATAGTTCAAAC
TCTCTATTTAATTCTGGCTTGTGGATCTTGAAGAAGTTTAAAGGCACACAGTGTATTCAT
CAACTCACACTCACGGATGATCCAGATCTTCAAAATACATTTTTCTACAAACTCTGCAAG
CAAAAGACATTGGACAACTTCCAGAATATAATATTGTTGTCTTCACCACAGGATGGTTAT
GTTCCATATCATTCTGCCAGAATCGAATTGTGCCAGGGAGCTTCATGGGACTACTCAAAG
AAGGGCAAAGTGTTTCTGGAGATGCTGAATGAGTGCTTGGATCAGATACGAGGCCCCTCT
GAGGGTCGAGTATTCATGCGGTGTGATGTCAACTTTGATACCTCCAATCAAGGGAGGAAC
TTGAATACCATTATTGGGCGAGCTGCTCATATTGAGTTCCTTGAAACTGACATCTTTGCA
AGGTTCATAATGTGGTCTTTCCCAGAACTATTTCGATAGGTCATTGTGAG