Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0055g00340.t01
CDS Infomation

cds chromosome:12X:12:13065135:13067116:1 gene:VIT_12s0055g00340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAGAAGGAAGGCCAATGGAAATTGATCTGTCCCTGAAGATAGATGATGAAGGAGAA
GGAGATGGAGAAGGAGAGGAAGAAGCAGAAGGAGAAGAAGGAGATGAACAAGTGCAACGA
GAAGATCAACAAAAGGAAAAGGAAACAGGTCATGTAGAAGATAAAGGAGAAGATGTGGAA
GCTGCTTCATCTGTTGAAGAGAACTTGAAGACGGAAGAGTTATGTGTGTTACAGATGGAG
ATGAATCGAATGAAAGAGGAGAACAAAGTGTTGAGGAAGGTAGTAGAGGAAACAATGAAA
GATTACCGTGATCTCCAAATGAAATTCGCTCTTATTCAACAGAATAAGCAAAACAAGGAT
CTCCAAATCTCCCTCTCCCTCCATGGCAAGGACAGAAATCTTCAAGATCCCAGGAGGATT
TCCAAAGTCTTGAATATCAATGACCAAATCCTTCCATCATCACCCGAGGACAACGAAGAG
AGCGAATTAGGGCTGTCTTTGAGGTTGAAACCCAATACAAGAGAAGAAAGAGAGGAAGAT
GGAGAAGCAAATAAGGAAGAAACTGTAAGCTTTACACCCATACCAAATAGGCTACCTAGG
ACTGACTTGGCTGCAATCAAAAGCCACGCTGCTTCCCCACCCAACAGAAAAGCTAGGGTT
TCAGTCAGAGCAAGATGCCAAACAGCCACAATGAACGATGGCTGCCAATGGAGAAAATAT
GGGCAGAAAATCGCGAAAGGAAACCCTTGCCCACGAGCCTACTATCGTTGCACCGTTGCC
CCAGGATGCCCAGTTAGAAAACAGGTTCAAAGATGCTTAGAGGACATGTCAATACTCATA
ACCACCTATGAAGGAACACATAACCATCCACTCCCTGTGGGTGCAACAGCGATGGCTTCA
ACAACTTCTGCAGCAGCCTCCTTCATGTTAGTAGATTCAAGCAATCCTCTTTCAGAAGCC
TCCCTTTCTTACCCTAATTCCCATTTCATAAACCCGGGTTCTTCATCATCGATGATCAGA
AGCATAAACCCTAATGACCCTTCTAAAGGGATTGTCCTTGACCTCACCAACACTACCCCT
TCTGATCCACAACAATTCCCACTGCAAAGCTCCTCACACTCATCCGCCCAATTAGGTTTC
AGTTGGATGCCTAGCAAACCAAGCTACCATAGTGGTGGTAGTACCAATATTGCCAACAAT
CTTTTTCCTAACCCTAGAGCAGCTGAAGAAGACAGGTCCATAGCTGAAAATGTGACTGCA
ATCACTTCCAATCCCGACTTTAGGGTTGCGGTTGCGGCTGCAATCACTTCCTTCATCAAC
AAAGAAAGCCATACGAGTACTCACACCACAGGGCCTCCATTTGCTAACCCAAGGGATGGC
GAGGGTGGTGGTGGGTCTAGTGGCAACAACTGGGTTCTTGAATCTCTCCCTGCTAGTGTT
AAGCCCTACCGGCATTCACCATGA

Peptide Sequence

PEP ID

VIT_12s0055g00340.t01
PEP Infomation

pep chromosome:12X:12:13065135:13067116:1 gene:VIT_12s0055g00340 transcript:VIT_12s0055g00340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MREGRPMEIDLSLKIDDEGEGDGEGEEEAEGEEGDEQVQREDQQKEKETGHVEDKGEDVE
AASSVEENLKTEELCVLQMEMNRMKEENKVLRKVVEETMKDYRDLQMKFALIQQNKQNKD
LQISLSLHGKDRNLQDPRRISKVLNINDQILPSSPEDNEESELGLSLRLKPNTREEREED
GEANKEETVSFTPIPNRLPRTDLAAIKSHAASPPNRKARVSVRARCQTATMNDGCQWRKY
GQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMAS
TTSAAASFMLVDSSNPLSEASLSYPNSHFINPGSSSSMIRSINPNDPSKGIVLDLTNTTP
SDPQQFPLQSSSHSSAQLGFSWMPSKPSYHSGGSTNIANNLFPNPRAAEEDRSIAENVTA
ITSNPDFRVAVAAAITSFINKESHTSTHTTGPPFANPRDGEGGGGSSGNNWVLESLPASV
KPYRHSP

Transcript Sequence

Transcript ID

VIT_12s0055g00340.t01
Transcript Infomation

cdna chromosome:12X:12:13065135:13067116:1 gene:VIT_12s0055g00340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAGAAGGAAGGCCAATGGAAATTGATCTGTCCCTGAAGATAGATGATGAAGGAGAA
GGAGATGGAGAAGGAGAGGAAGAAGCAGAAGGAGAAGAAGGAGATGAACAAGTGCAACGA
GAAGATCAACAAAAGGAAAAGGAAACAGGTCATGTAGAAGATAAAGGAGAAGATGTGGAA
GCTGCTTCATCTGTTGAAGAGAACTTGAAGACGGAAGAGTTATGTGTGTTACAGATGGAG
ATGAATCGAATGAAAGAGGAGAACAAAGTGTTGAGGAAGGTAGTAGAGGAAACAATGAAA
GATTACCGTGATCTCCAAATGAAATTCGCTCTTATTCAACAGAATAAGCAAAACAAGGAT
CTCCAAATCTCCCTCTCCCTCCATGGCAAGGACAGAAATCTTCAAGATCCCAGGAGGATT
TCCAAAGTCTTGAATATCAATGACCAAATCCTTCCATCATCACCCGAGGACAACGAAGAG
AGCGAATTAGGGCTGTCTTTGAGGTTGAAACCCAATACAAGAGAAGAAAGAGAGGAAGAT
GGAGAAGCAAATAAGGAAGAAACTGTAAGCTTTACACCCATACCAAATAGGCTACCTAGG
ACTGACTTGGCTGCAATCAAAAGCCACGCTGCTTCCCCACCCAACAGAAAAGCTAGGGTT
TCAGTCAGAGCAAGATGCCAAACAGCCACAATGAACGATGGCTGCCAATGGAGAAAATAT
GGGCAGAAAATCGCGAAAGGAAACCCTTGCCCACGAGCCTACTATCGTTGCACCGTTGCC
CCAGGATGCCCAGTTAGAAAACAGGTTCAAAGATGCTTAGAGGACATGTCAATACTCATA
ACCACCTATGAAGGAACACATAACCATCCACTCCCTGTGGGTGCAACAGCGATGGCTTCA
ACAACTTCTGCAGCAGCCTCCTTCATGTTAGTAGATTCAAGCAATCCTCTTTCAGAAGCC
TCCCTTTCTTACCCTAATTCCCATTTCATAAACCCGGGTTCTTCATCATCGATGATCAGA
AGCATAAACCCTAATGACCCTTCTAAAGGGATTGTCCTTGACCTCACCAACACTACCCCT
TCTGATCCACAACAATTCCCACTGCAAAGCTCCTCACACTCATCCGCCCAATTAGGTTTC
AGTTGGATGCCTAGCAAACCAAGCTACCATAGTGGTGGTAGTACCAATATTGCCAACAAT
CTTTTTCCTAACCCTAGAGCAGCTGAAGAAGACAGGTCCATAGCTGAAAATGTGACTGCA
ATCACTTCCAATCCCGACTTTAGGGTTGCGGTTGCGGCTGCAATCACTTCCTTCATCAAC
AAAGAAAGCCATACGAGTACTCACACCACAGGGCCTCCATTTGCTAACCCAAGGGATGGC
GAGGGTGGTGGTGGGTCTAGTGGCAACAACTGGGTTCTTGAATCTCTCCCTGCTAGTGTT
AAGCCCTACCGGCATTCACCATGA