Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0035g01920.t01
CDS Infomation

cds chromosome:12X:12:22240908:22257049:-1 gene:VIT_12s0035g01920 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methionine S-methyltransferase [Source:UniProtKB/TrEMBL;Acc:D7TGK4]
Sequence

ATGGAGAATTCTGCTTGGTCTGTTGACGGGTTCTTGGATCAGTGCAGGCAGTCCGGAGAC
TCCGCCTACACTGCATTCCGATCACTCCTCGAGAAGCTCGAGGATCTGACCACCCGAGCT
CCGGCGAGGGTATTCTTGTCCGATCTCCAGAAGCGGTTCGCTTCCGGAGAGGCCTCCGAG
CAATGCCTCAGTACCTTCCATTTCCGGATCCAAGACATCTTTTTGGACCAGTACGAAGGC
TACTGCGGGAGGAAGAAATTGACAATGATGGTGATCCCTAGCATTTTTATCCCAGAAGAC
TGGTCCTTTACTTTTTATGAAGGTCTGAACAGACATCCTGACTCTATCTTCAAGGACAAG
ACTGTTGCGGAGCTTGGTTGTGGAAATGGATGGATATCTATTGCCATTGCTGAGAAATGG
TCACCTTTAAAGGTGTATGGCCTTGATATTAATCCAAGAGCAGTAAAGATTTCGTGGATA
AACTTGTATCTAAATGCTTTGGATGATAATGGTCAACCTATCTATGATGGTGAAAATAAA
ACTCTACTGGACAGGGTGGAGTTTCATGAATCTGATCTGTTAGCTTACTGTAGAGATCGT
GGTATAGAACTTGAAAGGATTGTTGGATGCATACCACAGATTCTCAACCCAAATCCTGAT
GCAATGTCTAAGATGATTACAGAAAATGCCAGCGAGGAATTTCTATATTCACTGAGTAAT
TATTGTGCACTTCAGGGTTTTGTCGAGGATCAGTTTGGATTGGGTCTAATTGCTAGAGCA
GTTGAGGAAGGAATAGCTGTCATCAAACCAATGGGCATTATGATCTTCAATATGGGAGGT
CGACCAGGACAAGGTGTTTGTAAACGCTTGTTTGAGCGCCGTGGTTTCCGTGTTACTAGG
CTTTGGCAGACCAAAGCTGCTGATACAGATATTTCTGCTTTAGTCGAAATTGAGAAGAAT
AGTCCTCACCGCTTTGAGTTCTTCATGGGACTTGCTGGAGATCAGCCCATTTGTGCTCGA
ACAGCATGGGCCTATGGGAAGGCCGGTGGCCGCATTTCTCATGCTTTATCAGTTTACAGC
TGTCAACTTCGTCAACCAAATCAGGTGAAAACAATTTTTGAGTTTCTCAAAAATGGCTTC
CATGAGATCAGCAGTTCCTTAGATTTATTCTTTGAAGATGATTCTGTTGCTGATGAAAAG
ATTCCATTCCTAGCTTATCTTGCCAGTGTTTTGAAAGGGAATTCATTCTTCCCATATGAG
CCACCAGCTGGTAGCAAACGGTTCCGTAATCTCATTGCAGGCTTTATGAGAACATATCAC
CATGTTCCAGTCAATGCTGATAATGTTGTCATATTTCCTTCAAGGGCTGTGGCAATTGAG
AATGCTCTTCGATTATTCTCACCCCGTCTTGCAATTGTTGATGAAGATCTGACTCGACAT
CTTCCAAGACAGTGGTTAACATCCTTGAAAATTGAGAGTGCAAAAACAGATAATCCTTCA
GAGGATGTACTCACAGTGATTGAAGCCCCACGCCAGTCAGATTTAATGATAGAGCTCATC
AAAAAGTTGAAGCCACAGGTGGTGGTTACTGGGATTGCTCATTTTGAGGCTGTCACTAGC
TCAGCTTTTGAGCACCTTTTAAATATTACTGGAAAAATTGGATCTCGCCTTTTCTTAGAC
ATGTCTGATCACTTTGAGTTATCCAGCCTTCCAAGTTCCAACGGAGTCTTAAAATATCTG
TCAGGAACTCCTCTGCCCTCCCATGCAGCAGTTATATGTGGCCTAGTAAAAAATCAGGTT
TATTCAGATCTAGAAGTAGCTTTTGTCATTTCAGAAGAGGAGGCCATCTTTAAGGCACTG
TCCAAAACCGTGGAATTACTGGAAGGGAATACTGCACTCATTAGTCAGTATTATTATGGT
TGCCTTTTCCGCGAGCTTCTGGCTTTTCAGCTTGCTGATCGACATCCACCTGCAGAGAGG
GTATGTGAAAATGAAAAACCTGCTGAGATGATTGGCTTTGCTAGTTCTGCCCTTTCTGTC
CTTGATAATGCTGAGTTGTCAATTACCGAGACAGAAAACTCATCAGTGATCCACATGGAC
GTAGATAAAAGCTTCTTGCCATTTCCATCTTCAGTCAAGGCTTCTATCTTCGAGAGTTTT
TCAAGACAGAACATGGCTGAGTCAGAAACTGATATCACCACCAGCATCAGACAATTTATT
AAGAGCAACTACGGGTTCCCAACAAGTAGTGGAACAGAATTTATATATGCGGACTGCTCA
CTAGCCCTTTTCAATAAGCTGGTTCTTTGCTGCATCCAAGAAGGTGGTACCTTGTGCTTC
CCAGCTGGCTCAAATGGGAACCATGTATCTTCTGCTAAATTTTTGAAAGCAAACATTGTG
AATATCCCTACCAACTCTGAATTTGGGTTTAAGCTGTCTGAGAAGACACTTGCTGGGGTA
TTTGAGAGTGTGAATAACCCATGGTTGTACATTTCTGGTCCAACAATCAACCCTACTGGC
TTGGTATACAGCAATGGAGAGATGGAAAATATATTATCTATTTGTGCTAAATTTGGGGCA
AAAGTTGTGCTAGACACTTCATTTTCCGGACTGGAATATGACTTTGAGGGTTGTGGTGGC
TGGGATTTGGAAGGCATTTTGGTGAGACTGTATTCCTCTTCTAAACCGTCTTTTTGTGTA
TCACTGCTTGGAGGACTCTCTTTGAAGATGCTTACCGGAGGGCTTACATGCGGATTTTTG
GTTTTAAACCAGCCTCTTCTGATTGATGCATTTTATAGCTTTCCAGGATTAAGCAAACCT
CATAGTACTGTTAAATATACTGTAAAGAAGTTGCTAGGTCTGCGAGAGCAGAAAGCAGGA
GGCCTACTGGATGCTGTTGCAGAACATAAAAGAATTTTATGCAGCAGAGCTAAGCGTTTG
AAGCAGACACTTGAGAGCTGTGGTTGGGAGGTGCTTGAATCCCATGCTGGTGTTTCAATG
GTGGCAAAGCCATCTGCCTACCTCAACAAGGTCATCAAGCTCAAGCATCCATCAAAAGAC
GGAGGCAGCGCTGAAACCACCACTGCCTATGAAATCAAGATCAATGACTCAAACATCAGG
GAAGCCATTCTCAGGGCCACTGGCTTAGGTATCAACAGTGCTTCATGGACTGGAATCCCT
GGCTATTGTCGCTTCACCTTTGCTTTGGAAGACAGCGAATTTGGTCAGGCATTAGATTGC
ATCATCAAATTCAAAGACTTAATTCAGTAA

Peptide Sequence

PEP ID

VIT_12s0035g01920.t01
PEP Infomation

pep chromosome:12X:12:22240908:22257049:-1 gene:VIT_12s0035g01920 transcript:VIT_12s0035g01920.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methionine S-methyltransferase [Source:UniProtKB/TrEMBL;Acc:D7TGK4]
Sequence

MENSAWSVDGFLDQCRQSGDSAYTAFRSLLEKLEDLTTRAPARVFLSDLQKRFASGEASE
QCLSTFHFRIQDIFLDQYEGYCGRKKLTMMVIPSIFIPEDWSFTFYEGLNRHPDSIFKDK
TVAELGCGNGWISIAIAEKWSPLKVYGLDINPRAVKISWINLYLNALDDNGQPIYDGENK
TLLDRVEFHESDLLAYCRDRGIELERIVGCIPQILNPNPDAMSKMITENASEEFLYSLSN
YCALQGFVEDQFGLGLIARAVEEGIAVIKPMGIMIFNMGGRPGQGVCKRLFERRGFRVTR
LWQTKAADTDISALVEIEKNSPHRFEFFMGLAGDQPICARTAWAYGKAGGRISHALSVYS
CQLRQPNQVKTIFEFLKNGFHEISSSLDLFFEDDSVADEKIPFLAYLASVLKGNSFFPYE
PPAGSKRFRNLIAGFMRTYHHVPVNADNVVIFPSRAVAIENALRLFSPRLAIVDEDLTRH
LPRQWLTSLKIESAKTDNPSEDVLTVIEAPRQSDLMIELIKKLKPQVVVTGIAHFEAVTS
SAFEHLLNITGKIGSRLFLDMSDHFELSSLPSSNGVLKYLSGTPLPSHAAVICGLVKNQV
YSDLEVAFVISEEEAIFKALSKTVELLEGNTALISQYYYGCLFRELLAFQLADRHPPAER
VCENEKPAEMIGFASSALSVLDNAELSITETENSSVIHMDVDKSFLPFPSSVKASIFESF
SRQNMAESETDITTSIRQFIKSNYGFPTSSGTEFIYADCSLALFNKLVLCCIQEGGTLCF
PAGSNGNHVSSAKFLKANIVNIPTNSEFGFKLSEKTLAGVFESVNNPWLYISGPTINPTG
LVYSNGEMENILSICAKFGAKVVLDTSFSGLEYDFEGCGGWDLEGILVRLYSSSKPSFCV
SLLGGLSLKMLTGGLTCGFLVLNQPLLIDAFYSFPGLSKPHSTVKYTVKKLLGLREQKAG
GLLDAVAEHKRILCSRAKRLKQTLESCGWEVLESHAGVSMVAKPSAYLNKVIKLKHPSKD
GGSAETTTAYEIKINDSNIREAILRATGLGINSASWTGIPGYCRFTFALEDSEFGQALDC
IIKFKDLIQ

Transcript Sequence

Transcript ID

VIT_12s0035g01920.t01
Transcript Infomation

cdna chromosome:12X:12:22240908:22257049:-1 gene:VIT_12s0035g01920 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methionine S-methyltransferase [Source:UniProtKB/TrEMBL;Acc:D7TGK4]
Sequence

AAAGAGATGGGCTAATAATAGACTTGACCTCCTTGCATCTAACAGTGTGTATATTGGTGA
GAGGATCTTATGGAATAGACCTAAGCATGCATTACCTCTATTATGGAGAATTCTGCTTGG
TCTGTTGACGGGTTCTTGGATCAGTGCAGGCAGTCCGGAGACTCCGCCTACACTGCATTC
CGATCACTCCTCGAGAAGCTCGAGGATCTGACCACCCGAGCTCCGGCGAGGGTATTCTTG
TCCGATCTCCAGAAGCGGTTCGCTTCCGGAGAGGCCTCCGAGCAATGCCTCAGTACCTTC
CATTTCCGGATCCAAGACATCTTTTTGGACCAGTACGAAGGCTACTGCGGGAGGAAGAAA
TTGACAATGATGGTGATCCCTAGCATTTTTATCCCAGAAGACTGGTCCTTTACTTTTTAT
GAAGGTCTGAACAGACATCCTGACTCTATCTTCAAGGACAAGACTGTTGCGGAGCTTGGT
TGTGGAAATGGATGGATATCTATTGCCATTGCTGAGAAATGGTCACCTTTAAAGGTGTAT
GGCCTTGATATTAATCCAAGAGCAGTAAAGATTTCGTGGATAAACTTGTATCTAAATGCT
TTGGATGATAATGGTCAACCTATCTATGATGGTGAAAATAAAACTCTACTGGACAGGGTG
GAGTTTCATGAATCTGATCTGTTAGCTTACTGTAGAGATCGTGGTATAGAACTTGAAAGG
ATTGTTGGATGCATACCACAGATTCTCAACCCAAATCCTGATGCAATGTCTAAGATGATT
ACAGAAAATGCCAGCGAGGAATTTCTATATTCACTGAGTAATTATTGTGCACTTCAGGGT
TTTGTCGAGGATCAGTTTGGATTGGGTCTAATTGCTAGAGCAGTTGAGGAAGGAATAGCT
GTCATCAAACCAATGGGCATTATGATCTTCAATATGGGAGGTCGACCAGGACAAGGTGTT
TGTAAACGCTTGTTTGAGCGCCGTGGTTTCCGTGTTACTAGGCTTTGGCAGACCAAAGCT
GCTGATACAGATATTTCTGCTTTAGTCGAAATTGAGAAGAATAGTCCTCACCGCTTTGAG
TTCTTCATGGGACTTGCTGGAGATCAGCCCATTTGTGCTCGAACAGCATGGGCCTATGGG
AAGGCCGGTGGCCGCATTTCTCATGCTTTATCAGTTTACAGCTGTCAACTTCGTCAACCA
AATCAGGTGAAAACAATTTTTGAGTTTCTCAAAAATGGCTTCCATGAGATCAGCAGTTCC
TTAGATTTATTCTTTGAAGATGATTCTGTTGCTGATGAAAAGATTCCATTCCTAGCTTAT
CTTGCCAGTGTTTTGAAAGGGAATTCATTCTTCCCATATGAGCCACCAGCTGGTAGCAAA
CGGTTCCGTAATCTCATTGCAGGCTTTATGAGAACATATCACCATGTTCCAGTCAATGCT
GATAATGTTGTCATATTTCCTTCAAGGGCTGTGGCAATTGAGAATGCTCTTCGATTATTC
TCACCCCGTCTTGCAATTGTTGATGAAGATCTGACTCGACATCTTCCAAGACAGTGGTTA
ACATCCTTGAAAATTGAGAGTGCAAAAACAGATAATCCTTCAGAGGATGTACTCACAGTG
ATTGAAGCCCCACGCCAGTCAGATTTAATGATAGAGCTCATCAAAAAGTTGAAGCCACAG
GTGGTGGTTACTGGGATTGCTCATTTTGAGGCTGTCACTAGCTCAGCTTTTGAGCACCTT
TTAAATATTACTGGAAAAATTGGATCTCGCCTTTTCTTAGACATGTCTGATCACTTTGAG
TTATCCAGCCTTCCAAGTTCCAACGGAGTCTTAAAATATCTGTCAGGAACTCCTCTGCCC
TCCCATGCAGCAGTTATATGTGGCCTAGTAAAAAATCAGGTTTATTCAGATCTAGAAGTA
GCTTTTGTCATTTCAGAAGAGGAGGCCATCTTTAAGGCACTGTCCAAAACCGTGGAATTA
CTGGAAGGGAATACTGCACTCATTAGTCAGTATTATTATGGTTGCCTTTTCCGCGAGCTT
CTGGCTTTTCAGCTTGCTGATCGACATCCACCTGCAGAGAGGGTATGTGAAAATGAAAAA
CCTGCTGAGATGATTGGCTTTGCTAGTTCTGCCCTTTCTGTCCTTGATAATGCTGAGTTG
TCAATTACCGAGACAGAAAACTCATCAGTGATCCACATGGACGTAGATAAAAGCTTCTTG
CCATTTCCATCTTCAGTCAAGGCTTCTATCTTCGAGAGTTTTTCAAGACAGAACATGGCT
GAGTCAGAAACTGATATCACCACCAGCATCAGACAATTTATTAAGAGCAACTACGGGTTC
CCAACAAGTAGTGGAACAGAATTTATATATGCGGACTGCTCACTAGCCCTTTTCAATAAG
CTGGTTCTTTGCTGCATCCAAGAAGGTGGTACCTTGTGCTTCCCAGCTGGCTCAAATGGG
AACCATGTATCTTCTGCTAAATTTTTGAAAGCAAACATTGTGAATATCCCTACCAACTCT
GAATTTGGGTTTAAGCTGTCTGAGAAGACACTTGCTGGGGTATTTGAGAGTGTGAATAAC
CCATGGTTGTACATTTCTGGTCCAACAATCAACCCTACTGGCTTGGTATACAGCAATGGA
GAGATGGAAAATATATTATCTATTTGTGCTAAATTTGGGGCAAAAGTTGTGCTAGACACT
TCATTTTCCGGACTGGAATATGACTTTGAGGGTTGTGGTGGCTGGGATTTGGAAGGCATT
TTGGTGAGACTGTATTCCTCTTCTAAACCGTCTTTTTGTGTATCACTGCTTGGAGGACTC
TCTTTGAAGATGCTTACCGGAGGGCTTACATGCGGATTTTTGGTTTTAAACCAGCCTCTT
CTGATTGATGCATTTTATAGCTTTCCAGGATTAAGCAAACCTCATAGTACTGTTAAATAT
ACTGTAAAGAAGTTGCTAGGTCTGCGAGAGCAGAAAGCAGGAGGCCTACTGGATGCTGTT
GCAGAACATAAAAGAATTTTATGCAGCAGAGCTAAGCGTTTGAAGCAGACACTTGAGAGC
TGTGGTTGGGAGGTGCTTGAATCCCATGCTGGTGTTTCAATGGTGGCAAAGCCATCTGCC
TACCTCAACAAGGTCATCAAGCTCAAGCATCCATCAAAAGACGGAGGCAGCGCTGAAACC
ACCACTGCCTATGAAATCAAGATCAATGACTCAAACATCAGGGAAGCCATTCTCAGGGCC
ACTGGCTTAGGTATCAACAGTGCTTCATGGACTGGAATCCCTGGCTATTGTCGCTTCACC
TTTGCTTTGGAAGACAGCGAATTTGGTCAGGCATTAGATTGCATCATCAAATTCAAAGAC
TTAATTCAGTAACTGAATTGCTCTACAACATCTGATTCATTGTTTTCGCGACTTAGGTGT
CGTGAAATGAACCAATCTTATTACCAGTTCTACAAGCTCAAAAGTTCAGTATCATGTGAG
ATTTTTCTAATCCATACCATTGGTATGTTAATGCAGTCTGATCTCATAC