Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0035g01890.t01
CDS Infomation

cds chromosome:12X:12:22189820:22221746:-1 gene:VIT_12s0035g01890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGAAGCTTCTGACTCGGAAATGGGCTCTCCGGAGAACGAAGCTCTCATCTCCGCT
GCTCAAAACCCTAGCTCCTCTGACTCCGATTCCGACTCCGACGTCGGCGAAGCCGAAGAG
CTTCTCCGACTCCAAACCCTAGAATCCGAAGTCTCCAGCGACCCCTCCAAATACGACGCT
CATGTCGAATACATAAAGTGCCTTCGCAAATTGGGCGAAATCGAGAAGCTTAGAGAAGCC
AGAGAGGCCATGAGCGCGCTCCATCCATTGACCCCTCTCATGTGGCAGGAATGGGCTCGA
GATGAGCTAACGGCTCGGCCTGAGGCTTTTCTTGAAATTGAGAAGCTCTATGAGAAAGGA
GTCTTCGATTACCTGTCTGTCCCTCTTTGGTGTGACTACTTAAATTTTGTTCAAGAACAT
GATCCAGCAGTTCGTGAATGTTCATCTGAAGGGATTTTGAAGGCAAGAAACCTGTTTGAG
CGTGCACTTACAGCAGCTGGTCTGCATGTTGCTGAAGGAAGTAAAATATGGGAAGTATAC
AGGGAATTCGAGCAAGCTATCCTTCTTACTATAGATGAAAATGACAATGAGGCAAAAGAA
AAGCAGGTCCAGCGCATCCGAAACATATTCCATCGTCAATTGTCTGTTCCCCTTGCTAAC
ATGAGGTCAACACTTCTTGCCTTCAAGGCTTGGGAAGTGGAACAAGGCAATGTTCTTGAT
GTAAATTCTAGCAGTATGGATGGGATTTCATCTCATGTTGCCTCTGCATACGAGAAGGCG
ATGGATATGTATGATGCTCGTGCCCATCTTGAAGAACAAATAGTGAGGCAGGATATTTCT
GACTCAGAAAGACATCAACAATTCCTAAACTACTTGAATTTTGAACAGTCTTCTGGTGAT
CCAGCTCGAGTTCAAATTCTGTATGAACGTGCTATTACCGAGTTTCCAGTGTCAAGGGAT
CTCTGGCTTGATTATACTCAGTACTTGGACAAAACATTGAAGGTAGCCAATGTTGTTAGG
GATGTATATTCCAGGGCTGTAAAGAACTGTCCCTGGGTTGGAGAGCTTTGGGTTCAGTAC
TTGCTTTCCTTGGAACGTGCACGTGCTTCTGAGAGAGAGATTTCAACAGTTTTTGACAAG
TCCTTGCAATGCACTTTTTCAAGATTTGGGGAGTACCTCAATTTATTCCTCACTCGAGTA
GATGGCTTGAGGAGGAGAATTTCACTACCTGGGCAAGAAGAGGTCTTAGAATATGCATTG
ATACGGGACGCTTTTCAGTATGCATCAGATTACTTGTCACCACACCTAAAGTGCACAGAT
GATTTGGTGCGATTGCATGCTTATTGGGCTCGTTTAGAGCTAAATCTGAATAAAGATCTA
GTTGCAGCTCGTGGAGTTTGGGAGAGCTTACTTAAGAACAGTGGTTCAATGTTCGGAGCC
TGGCAAGGCTATATTGCGATGGAACTTGAAGCAGGCCATATAAATGAAGCTAGATCTATA
TATAAGAGATGCTACAGTAAAAGGTTTGCTGGGACAGGTTCAGAGGACATATGTCATTCT
TGGTTGCGCTTTGAGAGGGAATTTGGCACACTGGAAGATTTGGAGCATGCTGTACGAAAG
GTTACACCTCGTCTGGCAGAGCTACAGTTATTTAAGTTACAAGAGTCTAAAAGTACAGCT
GCATCAACAGATCAGATAGAGAATCCCCATAAGAAAAATGCCCGTGAGAAGAGAAAGTCA
ACCTCCAGTAGAACTGATGAACAACCTCCAGCCAAGCGGCAGAAAGATACTGCTCAAAAC
CCAAAGAAAGTTGATGGAAAAGGCAGAATTGAATTGGAGAACGTAGTTGCATCAAATGAA
GAGCAAGAGCTTAAAGCTAAAGATGACAAGCCAGATGACATGAACAAAAGACAAATGAAA
GGCCCCAGCCATGAAAAGAACAAGTACTTGGACCAGTGCACTGCATTCATATCAAACCTT
GACCTTGAGGCAAATTATGAACATCTACGTGATTTCTTCAGTGATGTTGGTGGAGTCACA
GCTATTCGAATATTGAAGGACAAGTTCACTGGAAAATCAAGGGGACTGGCATATGTGGAT
TTCTCAGATGATGCCCACCTTGCTGCGGCTGTAGCAAAGAACAAGAAGATGCTGCGGGGA
AAGAGATTGAGCATTGCACGATCAGATCCAAAGCAGAAAGGTAAAGGAGCAGGGCACTCT
AATGATCAAACTGGTACAGTTGGGGAATCTGATTCAAAAGAATCTGGTCAAATATCCTCG
TCCAAGGCACCTCAGGCACGTAGAGATGACAATTTCCAGCTCAAGGGAAGAAACACATTT
GCAGTGCCAAGAAATGTCAGACCCCTTGGCTGGATTGACAAGAAAAAGAAAACTGAGGAA
GAGACAGATGAGATGCCAAAATCTAATGATGAGTTCAGGAAAATGCTCCTAAAGAGTTAG

Peptide Sequence

PEP ID

VIT_12s0035g01890.t01
PEP Infomation

pep chromosome:12X:12:22189820:22221746:-1 gene:VIT_12s0035g01890 transcript:VIT_12s0035g01890.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAEASDSEMGSPENEALISAAQNPSSSDSDSDSDVGEAEELLRLQTLESEVSSDPSKYDA
HVEYIKCLRKLGEIEKLREAREAMSALHPLTPLMWQEWARDELTARPEAFLEIEKLYEKG
VFDYLSVPLWCDYLNFVQEHDPAVRECSSEGILKARNLFERALTAAGLHVAEGSKIWEVY
REFEQAILLTIDENDNEAKEKQVQRIRNIFHRQLSVPLANMRSTLLAFKAWEVEQGNVLD
VNSSSMDGISSHVASAYEKAMDMYDARAHLEEQIVRQDISDSERHQQFLNYLNFEQSSGD
PARVQILYERAITEFPVSRDLWLDYTQYLDKTLKVANVVRDVYSRAVKNCPWVGELWVQY
LLSLERARASEREISTVFDKSLQCTFSRFGEYLNLFLTRVDGLRRRISLPGQEEVLEYAL
IRDAFQYASDYLSPHLKCTDDLVRLHAYWARLELNLNKDLVAARGVWESLLKNSGSMFGA
WQGYIAMELEAGHINEARSIYKRCYSKRFAGTGSEDICHSWLRFEREFGTLEDLEHAVRK
VTPRLAELQLFKLQESKSTAASTDQIENPHKKNAREKRKSTSSRTDEQPPAKRQKDTAQN
PKKVDGKGRIELENVVASNEEQELKAKDDKPDDMNKRQMKGPSHEKNKYLDQCTAFISNL
DLEANYEHLRDFFSDVGGVTAIRILKDKFTGKSRGLAYVDFSDDAHLAAAVAKNKKMLRG
KRLSIARSDPKQKGKGAGHSNDQTGTVGESDSKESGQISSSKAPQARRDDNFQLKGRNTF
AVPRNVRPLGWIDKKKKTEEETDEMPKSNDEFRKMLLKS

Transcript Sequence

Transcript ID

VIT_12s0035g01890.t01
Transcript Infomation

cdna chromosome:12X:12:22189820:22221746:-1 gene:VIT_12s0035g01890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCTAAACTGGGCTACAATGGCGGAAGCTTCTGACTCGGAAATGGGCTCTCCGGAGAACG
AAGCTCTCATCTCCGCTGCTCAAAACCCTAGCTCCTCTGACTCCGATTCCGACTCCGACG
TCGGCGAAGCCGAAGAGCTTCTCCGACTCCAAACCCTAGAATCCGAAGTCTCCAGCGACC
CCTCCAAATACGACGCTCATGTCGAATACATAAAGTGCCTTCGCAAATTGGGCGAAATCG
AGAAGCTTAGAGAAGCCAGAGAGGCCATGAGCGCGCTCCATCCATTGACCCCTCTCATGT
GGCAGGAATGGGCTCGAGATGAGCTAACGGCTCGGCCTGAGGCTTTTCTTGAAATTGAGA
AGCTCTATGAGAAAGGAGTCTTCGATTACCTGTCTGTCCCTCTTTGGTGTGACTACTTAA
ATTTTGTTCAAGAACATGATCCAGCAGTTCGTGAATGTTCATCTGAAGGGATTTTGAAGG
CAAGAAACCTGTTTGAGCGTGCACTTACAGCAGCTGGTCTGCATGTTGCTGAAGGAAGTA
AAATATGGGAAGTATACAGGGAATTCGAGCAAGCTATCCTTCTTACTATAGATGAAAATG
ACAATGAGGCAAAAGAAAAGCAGGTCCAGCGCATCCGAAACATATTCCATCGTCAATTGT
CTGTTCCCCTTGCTAACATGAGGTCAACACTTCTTGCCTTCAAGGCTTGGGAAGTGGAAC
AAGGCAATGTTCTTGATGTAAATTCTAGCAGTATGGATGGGATTTCATCTCATGTTGCCT
CTGCATACGAGAAGGCGATGGATATGTATGATGCTCGTGCCCATCTTGAAGAACAAATAG
TGAGGCAGGATATTTCTGACTCAGAAAGACATCAACAATTCCTAAACTACTTGAATTTTG
AACAGTCTTCTGGTGATCCAGCTCGAGTTCAAATTCTGTATGAACGTGCTATTACCGAGT
TTCCAGTGTCAAGGGATCTCTGGCTTGATTATACTCAGTACTTGGACAAAACATTGAAGG
TAGCCAATGTTGTTAGGGATGTATATTCCAGGGCTGTAAAGAACTGTCCCTGGGTTGGAG
AGCTTTGGGTTCAGTACTTGCTTTCCTTGGAACGTGCACGTGCTTCTGAGAGAGAGATTT
CAACAGTTTTTGACAAGTCCTTGCAATGCACTTTTTCAAGATTTGGGGAGTACCTCAATT
TATTCCTCACTCGAGTAGATGGCTTGAGGAGGAGAATTTCACTACCTGGGCAAGAAGAGG
TCTTAGAATATGCATTGATACGGGACGCTTTTCAGTATGCATCAGATTACTTGTCACCAC
ACCTAAAGTGCACAGATGATTTGGTGCGATTGCATGCTTATTGGGCTCGTTTAGAGCTAA
ATCTGAATAAAGATCTAGTTGCAGCTCGTGGAGTTTGGGAGAGCTTACTTAAGAACAGTG
GTTCAATGTTCGGAGCCTGGCAAGGCTATATTGCGATGGAACTTGAAGCAGGCCATATAA
ATGAAGCTAGATCTATATATAAGAGATGCTACAGTAAAAGGTTTGCTGGGACAGGTTCAG
AGGACATATGTCATTCTTGGTTGCGCTTTGAGAGGGAATTTGGCACACTGGAAGATTTGG
AGCATGCTGTACGAAAGGTTACACCTCGTCTGGCAGAGCTACAGTTATTTAAGTTACAAG
AGTCTAAAAGTACAGCTGCATCAACAGATCAGATAGAGAATCCCCATAAGAAAAATGCCC
GTGAGAAGAGAAAGTCAACCTCCAGTAGAACTGATGAACAACCTCCAGCCAAGCGGCAGA
AAGATACTGCTCAAAACCCAAAGAAAGTTGATGGAAAAGGCAGAATTGAATTGGAGAACG
TAGTTGCATCAAATGAAGAGCAAGAGCTTAAAGCTAAAGATGACAAGCCAGATGACATGA
ACAAAAGACAAATGAAAGGCCCCAGCCATGAAAAGAACAAGTACTTGGACCAGTGCACTG
CATTCATATCAAACCTTGACCTTGAGGCAAATTATGAACATCTACGTGATTTCTTCAGTG
ATGTTGGTGGAGTCACAGCTATTCGAATATTGAAGGACAAGTTCACTGGAAAATCAAGGG
GACTGGCATATGTGGATTTCTCAGATGATGCCCACCTTGCTGCGGCTGTAGCAAAGAACA
AGAAGATGCTGCGGGGAAAGAGATTGAGCATTGCACGATCAGATCCAAAGCAGAAAGGTA
AAGGAGCAGGGCACTCTAATGATCAAACTGGTACAGTTGGGGAATCTGATTCAAAAGAAT
CTGGTCAAATATCCTCGTCCAAGGCACCTCAGGCACGTAGAGATGACAATTTCCAGCTCA
AGGGAAGAAACACATTTGCAGTGCCAAGAAATGTCAGACCCCTTGGCTGGATTGACAAGA
AAAAGAAAACTGAGGAAGAGACAGATGAGATGCCAAAATCTAATGATGAGTTCAGGAAAA
TGCTCCTAAAGAGTTAGTTATATTTAGCGTACCATTATATGGTGAAGGTTATATGGATGT
GAATTAGAGGCTCATGTAAAACACCAGCTGAGATTGTTTCTTGCTTAACTCACCATTATC
GTAGTGTTATGTTAATGTACAAAAACCCCCTAATGACAATATAATCCTTT