Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0035g01870.t01
CDS Infomation

cds chromosome:12X:12:22156613:22172456:1 gene:VIT_12s0035g01870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCTCCCATGAAGCTCAAGCAATCTCCCTCGCCGCAAACCCTAGCCACATCACAGGAT
GCGCGGTTGCTTGCTCGAGAAACGCTGCGCATCAGCGCGAGTCTTGCTTCATCGCCGGCG
CCGTCTGCGGTTGCGTCGTCTCCGGAAGCTCGTAACCTTGGGATTGTGGATGAGCAGTTC
GTGGACGCGAGTCTGAGGTTGATTTGCTGCGAGGAGATCAATGGGCGGCGGTGGAACTAC
GTGGTTGATAACGAGGGCGGCAATGGTCAGGGCAGAAACGGCTCTCTGCGCGCCGTCTGC
TCGCAGACTCCTCAGGCTCCGGTTGATGAGTTGATGTCATTCATAAGATCCTATGTGGTG
CCCGAGGGATTCCCGGATAGTGTTACTCCTTCATATGTGCCATACATGTCATGGAGAGCT
TTAAAGCACTTCTTTGGCGGAGCAATGGGTGTTTTCACAACACAAACACTTCTGAATTCA
GTTGGAGTTTCTAGAAACCGATCTGCTCCTGGGGCTGTTGCTATCAACTGGATTCTCAAG
GATGGTGCTGGTCGTGTTGGGAAAATGCTTTTTGCACGGCAAGGGAAGAAGTTTGATTAT
GATCTAAAACAGCTACGATTGGCGGGTGATCTCCTTATGGAGTTGGGTGCTGGGGTAGAG
TTGGCAACTGCAGCTGTTCCACACCTTTTTCTGCCTTTGGCTTGTGCTGCAAATGTTGCC
AAGAATGTTGCTGCGGTAACGTCAACATCAACCCGCACACCAATTTACAAAGCCTTTGCT
AAAGGAGAAAACATTGGAGATGTCACTGCTAAAGGAGAATGTGTTGGCAATATTGCTGAT
CTGCTGGGAACTGGATTGAGTATCATGATCTCCAAAAGAAATCCGTCACTGGTGACCACA
TTTGCACTCCTTTCATGTGGATATGTCTTAAGTTCTTACCAAGAGGTAAAGTCTGTAGTG
TTGCATACATTGAATCGTGCTAGATTTTCTGTGGCTATAGACTCTTTCCTTAAGACAGGG
CGAGTACCCTCATTGCAGGAGGGCAATATGAAGGAAAACATATTCAGTTTTCCATGGTTG
GAAGATAAACCTATCGTTCTTGGATCCAGATTTAAGGATGCTTTCCAAGATGCTGGTTCA
TATCTCTCCATAGAGCCTCTGTTTGAGAAAGAGAGATATCTAGTGACATATAATCCTTCG
AAGGGTAAAGTGTATGCGTTACTGAAGGATCAGGCAAAGTCTGATGACATTCTAAAAGCT
GCTTTCCATGCGCATATGCTTCTGCATTTTATTGTTTCATCAAATGGGAGTGAATCTTTT
CCTACGAAGCAGCAGGACTATGATTCTACACATCTTATGCCCTCAACTGCTGATCTTGCA
GCTCATATTGCGGAATCATGTAAAATGGTCTCCACTTCGTATGGCCTTTTCAAGAGTAAA
GCTGCTGAACAGGGGTGGACAATGTCAGAATCACTTCTTAATCCTGGCCGAGCTCGGCTT
GTATTAACTGGTTAA

Peptide Sequence

PEP ID

VIT_12s0035g01870.t01
PEP Infomation

pep chromosome:12X:12:22156613:22172456:1 gene:VIT_12s0035g01870 transcript:VIT_12s0035g01870.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPPMKLKQSPSPQTLATSQDARLLARETLRISASLASSPAPSAVASSPEARNLGIVDEQF
VDASLRLICCEEINGRRWNYVVDNEGGNGQGRNGSLRAVCSQTPQAPVDELMSFIRSYVV
PEGFPDSVTPSYVPYMSWRALKHFFGGAMGVFTTQTLLNSVGVSRNRSAPGAVAINWILK
DGAGRVGKMLFARQGKKFDYDLKQLRLAGDLLMELGAGVELATAAVPHLFLPLACAANVA
KNVAAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGLSIMISKRNPSLVTT
FALLSCGYVLSSYQEVKSVVLHTLNRARFSVAIDSFLKTGRVPSLQEGNMKENIFSFPWL
EDKPIVLGSRFKDAFQDAGSYLSIEPLFEKERYLVTYNPSKGKVYALLKDQAKSDDILKA
AFHAHMLLHFIVSSNGSESFPTKQQDYDSTHLMPSTADLAAHIAESCKMVSTSYGLFKSK
AAEQGWTMSESLLNPGRARLVLTG

Transcript Sequence

Transcript ID

VIT_12s0035g01870.t01
Transcript Infomation

cdna chromosome:12X:12:22156613:22172456:1 gene:VIT_12s0035g01870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCTCCCATGAAGCTCAAGCAATCTCCCTCGCCGCAAACCCTAGCCACATCACAGGAT
GCGCGGTTGCTTGCTCGAGAAACGCTGCGCATCAGCGCGAGTCTTGCTTCATCGCCGGCG
CCGTCTGCGGTTGCGTCGTCTCCGGAAGCTCGTAACCTTGGGATTGTGGATGAGCAGTTC
GTGGACGCGAGTCTGAGGTTGATTTGCTGCGAGGAGATCAATGGGCGGCGGTGGAACTAC
GTGGTTGATAACGAGGGCGGCAATGGTCAGGGCAGAAACGGCTCTCTGCGCGCCGTCTGC
TCGCAGACTCCTCAGGCTCCGGTTGATGAGTTGATGTCATTCATAAGATCCTATGTGGTG
CCCGAGGGATTCCCGGATAGTGTTACTCCTTCATATGTGCCATACATGTCATGGAGAGCT
TTAAAGCACTTCTTTGGCGGAGCAATGGGTGTTTTCACAACACAAACACTTCTGAATTCA
GTTGGAGTTTCTAGAAACCGATCTGCTCCTGGGGCTGTTGCTATCAACTGGATTCTCAAG
GATGGTGCTGGTCGTGTTGGGAAAATGCTTTTTGCACGGCAAGGGAAGAAGTTTGATTAT
GATCTAAAACAGCTACGATTGGCGGGTGATCTCCTTATGGAGTTGGGTGCTGGGGTAGAG
TTGGCAACTGCAGCTGTTCCACACCTTTTTCTGCCTTTGGCTTGTGCTGCAAATGTTGCC
AAGAATGTTGCTGCGGTAACGTCAACATCAACCCGCACACCAATTTACAAAGCCTTTGCT
AAAGGAGAAAACATTGGAGATGTCACTGCTAAAGGAGAATGTGTTGGCAATATTGCTGAT
CTGCTGGGAACTGGATTGAGTATCATGATCTCCAAAAGAAATCCGTCACTGGTGACCACA
TTTGCACTCCTTTCATGTGGATATGTCTTAAGTTCTTACCAAGAGGTAAAGTCTGTAGTG
TTGCATACATTGAATCGTGCTAGATTTTCTGTGGCTATAGACTCTTTCCTTAAGACAGGG
CGAGTACCCTCATTGCAGGAGGGCAATATGAAGGAAAACATATTCAGTTTTCCATGGTTG
GAAGATAAACCTATCGTTCTTGGATCCAGATTTAAGGATGCTTTCCAAGATGCTGGTTCA
TATCTCTCCATAGAGCCTCTGTTTGAGAAAGAGAGATATCTAGTGACATATAATCCTTCG
AAGGGTAAAGTGTATGCGTTACTGAAGGATCAGGCAAAGTCTGATGACATTCTAAAAGCT
GCTTTCCATGCGCATATGCTTCTGCATTTTATTGTTTCATCAAATGGGAGTGAATCTTTT
CCTACGAAGCAGCAGGACTATGATTCTACACATCTTATGCCCTCAACTGCTGATCTTGCA
GCTCATATTGCGGAATCATGTAAAATGGTCTCCACTTCGTATGGCCTTTTCAAGAGTAAA
GCTGCTGAACAGGGGTGGACAATGTCAGAATCACTTCTTAATCCTGGCCGAGCTCGGCTT
GTATTAACTGGTTAACTGGAAAGTTATGTTCAAAACTCTTAAATTTCCATTCCGAGTTGG
GCGTGCCATACCAAGTGCTGAGACTACCACTGATACTCTCAAACTGTTCCACAAACAAAA
TCATGAAGGCATGGAATGAAAGTGCACATTACACCAATGGGACCATGGGAACCATGGCAT
TTATAAAGCTGGTCAGTTCTCTGTATTGAGCACCCAATTCTGTCTCAGTTCATGCTCTGT
GCTCAATCCAATACATATTAACTGCTTTTGCCTGCCTCCTATATGCCGCCACAACTTCAG
ACGAAACAGGCTGTTATTATGAATGTAATACTACACAAATACACATCAACTTCATTTGGT
CTTTTGAATAGGTTTTGGAGGTCTTCTGGTTTGTGCCCTTCTTGTTTTAGGGTTTTGGGG
TTTTAAGGTTTCTATTTTTGCCAATTTTCCTCCTTTTAAGTTTTAACCCACTTTGCCTTG
TTATGTTTAGAGAACAATGTAACCTTTTTTCTGATATCAATGATATTCTTCTTTACCCAA
ATTCCAAAA