Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0035g01180.t01
CDS Infomation

cds chromosome:12X:12:20975399:20980710:-1 gene:VIT_12s0035g01180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGCTGCATTTGCTCAAAAGGAAGTTCTGTCAACGAGTATGTTGAGAAGAATGCTAGG
GACAAAGAATTGAGCAAAAAATCGTCTAAGCGCCTTGTTGCTTCCTCAAGGAGAGAGGGA
GTTGTAGTGGAGGGTTATGGGGGAAGCAATGATGCAACCGCCCGGCTGATACCGACTCAA
TCAGCCGAGGACAACGCGGCATCCACCCCAGTTTCATGGGATAAGAGGCAGAAGAAATCA
ATGGCTATTGACAATTCCACGAGGGCCGCGGTTCAAAAACCCTCAACAATGGAAGTTGGG
ATGAATGCTGGACAACCCCAGATGACTAGGATTGTCAGCATGGGAAACGGGGTTGAAGCA
GCTCAAGCTGCTGCTGGGTGGCCATCTTGGCTGACTGCAGTGGCTGCAGAGGCCATCGAT
GGGTGGGTGCCCCGAAAGGCTGACTCATTTGAGAGGTTGGACAAGATTGGACAAGGAACT
TACAGCAGTGTGTACAAGGCACGTGACCTTGAGACTGGAAAAACCGTTGCATTGAAGAAG
GTGAGGTTTGCAAACATGGACCCAGAAAGTGTTCGGTTTATGGCAAGAGAAATCCATATT
CTGCGTAGGCTTGATCACCCAAATGTCATGAAGCTTGAAGGTCTGATCACTTCAAGGATG
TCTGGTAGTTTATATCTTGTATTTGAATATATGGACCATGATCTTGCTGGACTTGCATCA
TCACCCAAGATCAAGTTTACTGAACCGCAGATAAAATGTTATATGCAACAGCTACTTCGT
GGACTTGAACACTGCCACAGTCGTGGGGTTCTTCACCGTGACATCAAAGGTTCAAACCTT
CTTATTGATAATAATGGAAATCTCAAGATTGGTGATTTTGGGCTGGCGACATTTTTCCAA
CCATACCAAAAGCAGCCTCTAACGAGTCGTGTAGTTACTTTGTGGTACCGGCCACCTGAG
CTTTTGCTTGGTGCTACATCATATGGAGTTGCTGTGGATTTGTGGAGTGCTGGTTGCATT
CTTGCTGAACTGTATGCAGGAAAGCCCATCATGCAAGGAAGAACAGAGGTGGAGCAACTG
CATAGGATCTTCAAACTCTGTGGCTCACCTTCTGAAGAGTATTGGAAGAGAGCAAAACTT
CCACATGCAACCATTTTCAAACCTCAGCATCCTTACAGGCGTTGTGTTGCTGAAACTTTT
AGTGACTTCCCTTCACCAGCCTTGTCCCTTATGGATGTCCTTCTTGCAATAGAGCCTGAG
CGCCGGGGATCAGCTTCTTCTGCACTTCATAATGAGTTCTTCACAACAAAGCCTCTTCCC
TGTGACACATCAAATTTGCCCAAGTACCCACCAAGCAAGGAGTTCGATGCCAAGCTTCGA
GAAGAGGAAGCTAGAAGGCGAAGAGCAGCTGGCAGTAAAGGGCGTGGACACGAGTCTACC
AGAAAGGTTTCTAGAGAATCTAAAGCAGTGCCAGCACCAGATGCCAATGCTGAGTTGCAG
GTGTCCATACAGAAGCGTCGAGAGCAATCAAACCCCAAAAGCAAAAGCGAAAAGTTCATC
CCAGAAGAGGATGGTGGGTCTGGCTTCCCCATTGAGCCTACCAAAGGGACAACAAGGAAT
GGTTTCTCCCACTCTGGCAAGTCAATTCACCCCACTGCATTTGGATCTGCAAGAAACATG
GATGTGAATGAGGATGAGGCTCAAATGGGTCCTGGTCGTGGGTCTAATTCTTCAAGGAAT
GGTGCAGAATTGAGGATACAGAAATCCTACTCACATAGGGGAGGATCCCAACTGTCCATG
TTTTCTGGGTCAGTTGCAGTTCAAGGCTCTTCACGGTTTGACAATGACAGAGAGAATGGA
ATGAATCGGCACTGGCCAGAGGAGCGCTGCAATGCCAGATATAACGAGCTGGGTGGTGCT
GAGTCCTCGGAGAAGCACCAGTGGTCTCACCATTTGCTGGACAGGCCAAAGTCTTCTCAC
AAGAAGGATGAACAACCCTCTGAAAAGGGGTCATCAATGGGTTACGCCCCAAAGAAGAAT
CGGATTCACTACTCAGGACCATTGATGCCTCCTGGGGGAAATCTTGAGGAAATGCTCAAA
GAGCATGAGAAACAAATCCAACTTGCTGTCCGCAAAGCTCGTCTTGACAAAGTGAAGACC
AAGAAAGCATACAATGACAACGGACAAACTGAATCGCTACTTCCCCATGGGAGAAACAAC
AGGTAA

Peptide Sequence

PEP ID

VIT_12s0035g01180.t01
PEP Infomation

pep chromosome:12X:12:20975399:20980710:-1 gene:VIT_12s0035g01180 transcript:VIT_12s0035g01180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGCICSKGSSVNEYVEKNARDKELSKKSSKRLVASSRREGVVVEGYGGSNDATARLIPTQ
SAEDNAASTPVSWDKRQKKSMAIDNSTRAAVQKPSTMEVGMNAGQPQMTRIVSMGNGVEA
AQAAAGWPSWLTAVAAEAIDGWVPRKADSFERLDKIGQGTYSSVYKARDLETGKTVALKK
VRFANMDPESVRFMAREIHILRRLDHPNVMKLEGLITSRMSGSLYLVFEYMDHDLAGLAS
SPKIKFTEPQIKCYMQQLLRGLEHCHSRGVLHRDIKGSNLLIDNNGNLKIGDFGLATFFQ
PYQKQPLTSRVVTLWYRPPELLLGATSYGVAVDLWSAGCILAELYAGKPIMQGRTEVEQL
HRIFKLCGSPSEEYWKRAKLPHATIFKPQHPYRRCVAETFSDFPSPALSLMDVLLAIEPE
RRGSASSALHNEFFTTKPLPCDTSNLPKYPPSKEFDAKLREEEARRRRAAGSKGRGHEST
RKVSRESKAVPAPDANAELQVSIQKRREQSNPKSKSEKFIPEEDGGSGFPIEPTKGTTRN
GFSHSGKSIHPTAFGSARNMDVNEDEAQMGPGRGSNSSRNGAELRIQKSYSHRGGSQLSM
FSGSVAVQGSSRFDNDRENGMNRHWPEERCNARYNELGGAESSEKHQWSHHLLDRPKSSH
KKDEQPSEKGSSMGYAPKKNRIHYSGPLMPPGGNLEEMLKEHEKQIQLAVRKARLDKVKT
KKAYNDNGQTESLLPHGRNNR

Transcript Sequence

Transcript ID

VIT_12s0035g01180.t01
Transcript Infomation

cdna chromosome:12X:12:20975399:20980710:-1 gene:VIT_12s0035g01180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGATGATCGGAGTGTTAGTGGTTTTAGAAGGAATGCTGATTCAATCTTGAGCTTAATGTA
GCAAGAATTGGCGGAATCACAACTGGGTTTGGTGCTGGGAGCTCTGGGAAGAAGACAGTT
TCCTGTTTGGATACAGGGAACTGAGCAGAAGAAACTGTGAGGTAGGATTATGGGCTGCAT
TTGCTCAAAAGGAAGTTCTGTCAACGAGTATGTTGAGAAGAATGCTAGGGACAAAGAATT
GAGCAAAAAATCGTCTAAGCGCCTTGTTGCTTCCTCAAGGAGAGAGGGAGTTGTAGTGGA
GGGTTATGGGGGAAGCAATGATGCAACCGCCCGGCTGATACCGACTCAATCAGCCGAGGA
CAACGCGGCATCCACCCCAGTTTCATGGGATAAGAGGCAGAAGAAATCAATGGCTATTGA
CAATTCCACGAGGGCCGCGGTTCAAAAACCCTCAACAATGGAAGTTGGGATGAATGCTGG
ACAACCCCAGATGACTAGGATTGTCAGCATGGGAAACGGGGTTGAAGCAGCTCAAGCTGC
TGCTGGGTGGCCATCTTGGCTGACTGCAGTGGCTGCAGAGGCCATCGATGGGTGGGTGCC
CCGAAAGGCTGACTCATTTGAGAGGTTGGACAAGATTGGACAAGGAACTTACAGCAGTGT
GTACAAGGCACGTGACCTTGAGACTGGAAAAACCGTTGCATTGAAGAAGGTGAGGTTTGC
AAACATGGACCCAGAAAGTGTTCGGTTTATGGCAAGAGAAATCCATATTCTGCGTAGGCT
TGATCACCCAAATGTCATGAAGCTTGAAGGTCTGATCACTTCAAGGATGTCTGGTAGTTT
ATATCTTGTATTTGAATATATGGACCATGATCTTGCTGGACTTGCATCATCACCCAAGAT
CAAGTTTACTGAACCGCAGATAAAATGTTATATGCAACAGCTACTTCGTGGACTTGAACA
CTGCCACAGTCGTGGGGTTCTTCACCGTGACATCAAAGGTTCAAACCTTCTTATTGATAA
TAATGGAAATCTCAAGATTGGTGATTTTGGGCTGGCGACATTTTTCCAACCATACCAAAA
GCAGCCTCTAACGAGTCGTGTAGTTACTTTGTGGTACCGGCCACCTGAGCTTTTGCTTGG
TGCTACATCATATGGAGTTGCTGTGGATTTGTGGAGTGCTGGTTGCATTCTTGCTGAACT
GTATGCAGGAAAGCCCATCATGCAAGGAAGAACAGAGGTGGAGCAACTGCATAGGATCTT
CAAACTCTGTGGCTCACCTTCTGAAGAGTATTGGAAGAGAGCAAAACTTCCACATGCAAC
CATTTTCAAACCTCAGCATCCTTACAGGCGTTGTGTTGCTGAAACTTTTAGTGACTTCCC
TTCACCAGCCTTGTCCCTTATGGATGTCCTTCTTGCAATAGAGCCTGAGCGCCGGGGATC
AGCTTCTTCTGCACTTCATAATGAGTTCTTCACAACAAAGCCTCTTCCCTGTGACACATC
AAATTTGCCCAAGTACCCACCAAGCAAGGAGTTCGATGCCAAGCTTCGAGAAGAGGAAGC
TAGAAGGCGAAGAGCAGCTGGCAGTAAAGGGCGTGGACACGAGTCTACCAGAAAGGTTTC
TAGAGAATCTAAAGCAGTGCCAGCACCAGATGCCAATGCTGAGTTGCAGGTGTCCATACA
GAAGCGTCGAGAGCAATCAAACCCCAAAAGCAAAAGCGAAAAGTTCATCCCAGAAGAGGA
TGGTGGGTCTGGCTTCCCCATTGAGCCTACCAAAGGGACAACAAGGAATGGTTTCTCCCA
CTCTGGCAAGTCAATTCACCCCACTGCATTTGGATCTGCAAGAAACATGGATGTGAATGA
GGATGAGGCTCAAATGGGTCCTGGTCGTGGGTCTAATTCTTCAAGGAATGGTGCAGAATT
GAGGATACAGAAATCCTACTCACATAGGGGAGGATCCCAACTGTCCATGTTTTCTGGGTC
AGTTGCAGTTCAAGGCTCTTCACGGTTTGACAATGACAGAGAGAATGGAATGAATCGGCA
CTGGCCAGAGGAGCGCTGCAATGCCAGATATAACGAGCTGGGTGGTGCTGAGTCCTCGGA
GAAGCACCAGTGGTCTCACCATTTGCTGGACAGGCCAAAGTCTTCTCACAAGAAGGATGA
ACAACCCTCTGAAAAGGGGTCATCAATGGGTTACGCCCCAAAGAAGAATCGGATTCACTA
CTCAGGACCATTGATGCCTCCTGGGGGAAATCTTGAGGAAATGCTCAAAGAGCATGAGAA
ACAAATCCAACTTGCTGTCCGCAAAGCTCGTCTTGACAAAGTGAAGACCAAGAAAGCATA
CAATGACAACGGACAAACTGAATCGCTACTTCCCCATGGGAGAAACAACAGGTAACCCTT
GAGTGGGGATTACTGGCAAACTTGATTTGGATCCAGAAGCTCCAGAAGAACAGTTCTCAT
ATTAGGAACTGATCGTCCTTTCCATCACCAGAAGCAAAAACTTGGGGTTTATGATCAGAT
ACCTATTATCTAAATCCTAGATATGCCATAAAGCTTGGATCATACCGAGAAGCTTTACGC
AATTCAGAAAGATGGACAAATAAAATCCATGGCCAATGACTATACAAAATGATCTGGTGG
TGATTATTGGGCTTCTTGATACGCTGGTCAGTTATTTGGTTGCTGGAAGGGGGGAGCTAA
GGGGAGTCAATTGCTGGAAAATATGCTTTGTACAGCTGAAAACTGGTTTGCTCATTCAAT
TTTTTTCACCCCATTTGATGTAAAGGCTAAGCCCATCCTTCCAAAGCTTGAATGAATTTA
TAAGCACAGTCCACTATGTGATTCAAACCACAGAAGAACACAGTTTCTGACAAGAAATAC
ATCAATATAACTGATTTGTTCTTGCTTGTTGGCAAA