Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0035g01090.t01
CDS Infomation

cds chromosome:12X:12:20849119:20896388:-1 gene:VIT_12s0035g01090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGGGTCCGTTGGATCGAACCAAGGTCGTGGTCCGGCACTTGCCGCCGACGATTTCG
GAGGCCGCGTTTTTGGAACAAATCGATACCGTCTTCAAGGGGCGCTACACCTTGGTCAAG
TTTCGTCCCGGGAAAAACAGCCAGAAGCGACAGTCCTATTCGAGAGCATACCTTGACTTC
AAGAGGCCAGAGGATGTTATTGAGTTTGCTGAGTTCTTTGATGGGCATGTTTTTGTTAAT
GAGAAAGGTACTCAGTTTAAAACTATTGTTGAGTATGCTCCTTCACAACGCATTCCAAAA
CATTGGCCTAAAAAGGATGGCCGTGAAGGGACAATATTTAAAGATCCTGAGTACATGGAG
TTTGTTGAACTTCTTGCGAAGCCTGTTGAGAATCTTCCCAGTGCAGAAATACAATTGGAG
AGAAGAGAAGCAGAACGAGCTGGTGCTGTGAAGGACACTCCTATAGTTACGCCTCTAATG
GATTTTGTCCGTCAGAAAAGAGCTGCCAAGGGTGTATCCCGGAGATCATTATCTAATGGA
AAACTAAGCAGAAGGGCCAGTGGGTCATCATCTGGAAATCCAAGTCTGGGCTCATCAAAA
CGGGGTTCTGAAAAGAGAAGACTCTCCACCACAATGTATGTTTTACGGGATACTGCAAAG
AGCACAAGTGCAAAAGACAAGTCAACGTTCATTCTGGTTCCAAAGCGAGATGACCAGCTG
CTGTCTGATAAGTCTGTTAATCTAGCTGCTGGAGGTGGAGCTGAAGCATTGGAAGAGGAA
AGTGGAGTTTCTGGAGCTGTTGATGCTGGGAAGAAGAAAGTCCTCCTCCTGAAAGGAAAA
GAGAGAGAAATTTCTCATCATTTACTGCAGCAGAATGTAACATCACCAGTAAAGAATATA
CTTGGTGCAAATGCTCCCAAGCAGAATCAGAGACGTGAAGGTAGTGGAAGGATAATCAGA
AGCATACTTTTAAACAAGGATGCACGTCAAAGTCAATCTTCTATGTTCCAGACGGAGCAA
CAGTCCCAAGCCTCTAACTTAGAGAAGGAGAAACGACCTCCTCGCCCTCCACACATTCAA
TTGGCTTCAAAGGAGACAAATGGAGCTCAAGATGACAAGGTTGTTGGGAATGATGTGCAT
AGTTTTGTCAGTGAGAAGCAGGACAAACGTACAAGAAATAAGGATAGACCTGACCGTGGT
GTATGGACTCCTCTTCGCCGTTCAGATGGATCACATGCAAGTGATGAGTCTTTGTCATCC
TCTGCTTCTCAACCTACATCTTCAGATTTTCCTGAAGGAAGTCATGGAGAAATGAGATCT
GACATGTCAAATGCAAGGAGTGGTGAAGTCAAAGCACTTGGAAGTGGACGTGGTGGCCAT
TCTGCATTAGATAATGGATCCCATAAACACAGTGGTCGCCGTGGACCAACACACAGTGTA
AAGGATGCTGATGGCTCTTCAATTGTAAGTGAGGGGAAGCATTCAAAAAGAGGAAGTGCT
CCTGGATATGGTTCCCATGAGAAACAAGTGTGGGTTCAGAAGTCAAGTTCAGGTCCTTAG

Peptide Sequence

PEP ID

VIT_12s0035g01090.t01
PEP Infomation

pep chromosome:12X:12:20849119:20896388:-1 gene:VIT_12s0035g01090 transcript:VIT_12s0035g01090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF
KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYME
FVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNG
KLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQL
LSDKSVNLAAGGGAEALEEESGVSGAVDAGKKKVLLLKGKEREISHHLLQQNVTSPVKNI
LGANAPKQNQRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNLEKEKRPPRPPHIQ
LASKETNGAQDDKVVGNDVHSFVSEKQDKRTRNKDRPDRGVWTPLRRSDGSHASDESLSS
SASQPTSSDFPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSV
KDADGSSIVSEGKHSKRGSAPGYGSHEKQVWVQKSSSGP

Transcript Sequence

Transcript ID

VIT_12s0035g01090.t01
Transcript Infomation

cdna chromosome:12X:12:20849119:20896388:-1 gene:VIT_12s0035g01090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACGTTCGTTTGATTTTCTCTCTCTTGCTTCCGCATGCATGTCGATTGTGGATCAAATTCG
AAGCTGGGGCACCGAACCCACCTTGATCGATGCCTAAAGAGATGTGATTTCTAGGAGTTT
TTCGAATCTTTCTACCGTTTGGGGCATCGAATCTGCGAAGCGTCGCCTTGTTTTCGTCAA
TTCTGATAGGGGTTCTGGGTTGGGAATTTCGCACATGAAGGGTCCGTTGGATCGAACCAA
GGTCGTGGTCCGGCACTTGCCGCCGACGATTTCGGAGGCCGCGTTTTTGGAACAAATCGA
TACCGTCTTCAAGGGGCGCTACACCTTGGTCAAGTTTCGTCCCGGGAAAAACAGCCAGAA
GCGACAGTCCTATTCGAGAGCATACCTTGACTTCAAGAGGCCAGAGGATGTTATTGAGTT
TGCTGAGTTCTTTGATGGGCATGTTTTTGTTAATGAGAAAGGTACTCAGTTTAAAACTAT
TGTTGAGTATGCTCCTTCACAACGCATTCCAAAACATTGGCCTAAAAAGGATGGCCGTGA
AGGGACAATATTTAAAGATCCTGAGTACATGGAGTTTGTTGAACTTCTTGCGAAGCCTGT
TGAGAATCTTCCCAGTGCAGAAATACAATTGGAGAGAAGAGAAGCAGAACGAGCTGGTGC
TGTGAAGGACACTCCTATAGTTACGCCTCTAATGGATTTTGTCCGTCAGAAAAGAGCTGC
CAAGGGTGTATCCCGGAGATCATTATCTAATGGAAAACTAAGCAGAAGGGCCAGTGGGTC
ATCATCTGGAAATCCAAGTCTGGGCTCATCAAAACGGGGTTCTGAAAAGAGAAGACTCTC
CACCACAATGTATGTTTTACGGGATACTGCAAAGAGCACAAGTGCAAAAGACAAGTCAAC
GTTCATTCTGGTTCCAAAGCGAGATGACCAGCTGCTGTCTGATAAGTCTGTTAATCTAGC
TGCTGGAGGTGGAGCTGAAGCATTGGAAGAGGAAAGTGGAGTTTCTGGAGCTGTTGATGC
TGGGAAGAAGAAAGTCCTCCTCCTGAAAGGAAAAGAGAGAGAAATTTCTCATCATTTACT
GCAGCAGAATGTAACATCACCAGTAAAGAATATACTTGGTGCAAATGCTCCCAAGCAGAA
TCAGAGACGTGAAGGTAGTGGAAGGATAATCAGAAGCATACTTTTAAACAAGGATGCACG
TCAAAGTCAATCTTCTATGTTCCAGACGGAGCAACAGTCCCAAGCCTCTAACTTAGAGAA
GGAGAAACGACCTCCTCGCCCTCCACACATTCAATTGGCTTCAAAGGAGACAAATGGAGC
TCAAGATGACAAGGTTGTTGGGAATGATGTGCATAGTTTTGTCAGTGAGAAGCAGGACAA
ACGTACAAGAAATAAGGATAGACCTGACCGTGGTGTATGGACTCCTCTTCGCCGTTCAGA
TGGATCACATGCAAGTGATGAGTCTTTGTCATCCTCTGCTTCTCAACCTACATCTTCAGA
TTTTCCTGAAGGAAGTCATGGAGAAATGAGATCTGACATGTCAAATGCAAGGAGTGGTGA
AGTCAAAGCACTTGGAAGTGGACGTGGTGGCCATTCTGCATTAGATAATGGATCCCATAA
ACACAGTGGTCGCCGTGGACCAACACACAGTGTAAAGGATGCTGATGGCTCTTCAATTGT
AAGTGAGGGGAAGCATTCAAAAAGAGGAAGTGCTCCTGGATATGGTTCCCATGAGAAACA
AGTGTGGGTTCAGAAGTCAAGTTCAGGTCCTTAGACTTCCTTAAAAGTTTCTATGCAGTG
AAATACTTGGGTCCTTTACCGTTTTGGAGCATGCATCTGCTAGTGAGTGGAGACTCTCTT
TTTGCTAGGCAGATGATCAAATGTAAGCAAATTTTCAACGGCAGGGTAAGAGGTTCCTCT
TGGAAAACCCTAGAGGAAAATTAAGTTGTTCTGGATGATGCAGATATTGATGTATCTACT
ACATGCTGATTGAAGAAACTCTGGTGTTCATCAAGGATGGCTCGGAATAGGAAGGAAAAA
AAAAAAGAAAGAAAAAGATCATTGTTATA