Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0035g01080.t01
CDS Infomation

cds chromosome:12X:12:20842676:20849118:-1 gene:VIT_12s0035g01080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATATATAACCCTCAATTTTCATCAGGTATCAATTTGAAATCCAACACCAAACCCATT
TTGGCGCGAATTTCCAACGGCTCAGTCCCCGCGACTGCCTCTCCATCTCCCAAACAATAC
AAACCCTTTCAAGGTAAGCCAGAGGCCGATGTTGTTGTGATTGGGAGCGGTATAGGTGGA
CTGTGTTGCGCGGGTCTTTTAGCTAGGTACCAGCAAGATGTTTTGGTGTTAGAAAGCCAT
GATCGACCTGGAGGTGCTGCTCATTCCTTTAAGATCAGAGACTATGAATTCGACTCGGGT
CCATCTCTATTCTCTGGGTTCCAGTCAAGAGGCCCTCAGGCCAATCCCCTAGCACAAGTT
CTTGATGCATTAGGTGAGTCAGTTCCATGTGCCAACTACGATTCATGGATGGTTTACATA
CCTGAAGGTGAATTCTTATCTCGCATTGGCGCCACAGAATTTTTCAAGGATCTTGAGAAG
TATGCAAGTCGGGATGCTGTGCGAGAATGGCAAAAACTTCTTGATGCAGTACTTCCGATG
TCTGCAGCTGCAATGGCTCTGCCTCCTCTATCAATCCGGGGTGATTTGGGCGTTATTTCC
ACTGCTGCAACTAGATATGCCCCCTCGCTCTTGAAATCATTTGTTCAAATGGGACCTCAG
GGAGCTCTTGGTGCTACTAAACTTCTCAGACCCTTCTCGGAAATCATGGATTCACTGGAC
CTGAAAGACCCCTTTATACGAAACTGGGTGGATCTCCTGGCTTTCCTGCTAGCAGGGGTG
AAATCTAATGGTATACTCTCAGCAGAGATGGTTTACATGTTTGCAGAATGGTACAAGCCA
GGTTGCACTCTTGAGTATCCTCTTCAAGGAACCGGGGCAGTGGTTGATGCACTTGTCCGG
GGGATGCAGAAGTTTGGAGGGCGGCTATCTCTTGAAAGCCATGTTGAAAAAATTGTTGTT
GAAAATGATCAAGCCATAGGAGTGAAGCTAAGAAGTGGTCAGTTCATACGTGCTAAGAAG
GCTGTTGTCAGCAATGCATCTATGTGGGACACTTTGAATCTGTTACCTAAGGAAGTAGTT
CCTAAATCATATCAAGACAGGATTAAGACAACCCCTCAATGTGAGTCATTCATGCATCTC
CATTTGGGTTTTGATGCAGAGGGCATACCAGAGGACTTGGGAATTCATCATATAGTCGTA
AACAATTGGGATAGAGGAGTTGACGCTGATCAGAATGTTGTTTTGATATCTGTACCTAGC
GTACTTAGTCCCAATCTTGCACCTCCTGGGAAACATGTGTTGCATGCTTATACACCAGGA
ACTGAACCATTTGAACTCTGGGAAGGACTTGATCGTAGAAGTGGTGAATACAGAAAGCTC
AAAGCTGAAAGATCAGAGGTAATGTGGAGAGCGGTGGAGCGTGTACTTGGTCCAGGTTTT
AAACAGGAGAAGTGTGAAGTGAAGTTGGTAGGAACGCCATTAACACATCAAAGGTTTCTC
CGAAGGAACAGGGGAACCTATGGGCCAGCCATGCAAGCTGGCAAAGACACCTTCCCAGGA
CATTCAACTCCAATCTCACATCTCTATTGCTGTGGAGATTCTACATTTCCCGGAATTGGA
GTCCCTGCAGTAGCTGCCAGCGGTGCCATCGTTGCTAACTCCCTGGTTTCTGTCTCTCAA
CATTCCCAGCTTCTTGATGCCATTGGAATTTGA

Peptide Sequence

PEP ID

VIT_12s0035g01080.t01
PEP Infomation

pep chromosome:12X:12:20842676:20849118:-1 gene:VIT_12s0035g01080 transcript:VIT_12s0035g01080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MIYNPQFSSGINLKSNTKPILARISNGSVPATASPSPKQYKPFQGKPEADVVVIGSGIGG
LCCAGLLARYQQDVLVLESHDRPGGAAHSFKIRDYEFDSGPSLFSGFQSRGPQANPLAQV
LDALGESVPCANYDSWMVYIPEGEFLSRIGATEFFKDLEKYASRDAVREWQKLLDAVLPM
SAAAMALPPLSIRGDLGVISTAATRYAPSLLKSFVQMGPQGALGATKLLRPFSEIMDSLD
LKDPFIRNWVDLLAFLLAGVKSNGILSAEMVYMFAEWYKPGCTLEYPLQGTGAVVDALVR
GMQKFGGRLSLESHVEKIVVENDQAIGVKLRSGQFIRAKKAVVSNASMWDTLNLLPKEVV
PKSYQDRIKTTPQCESFMHLHLGFDAEGIPEDLGIHHIVVNNWDRGVDADQNVVLISVPS
VLSPNLAPPGKHVLHAYTPGTEPFELWEGLDRRSGEYRKLKAERSEVMWRAVERVLGPGF
KQEKCEVKLVGTPLTHQRFLRRNRGTYGPAMQAGKDTFPGHSTPISHLYCCGDSTFPGIG
VPAVAASGAIVANSLVSVSQHSQLLDAIGI

Transcript Sequence

Transcript ID

VIT_12s0035g01080.t01
Transcript Infomation

cdna chromosome:12X:12:20842676:20849118:-1 gene:VIT_12s0035g01080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATATATAACCCTCAATTTTCATCAGGTATCAATTTGAAATCCAACACCAAACCCATT
TTGGCGCGAATTTCCAACGGCTCAGTCCCCGCGACTGCCTCTCCATCTCCCAAACAATAC
AAACCCTTTCAAGGTAAGCCAGAGGCCGATGTTGTTGTGATTGGGAGCGGTATAGGTGGA
CTGTGTTGCGCGGGTCTTTTAGCTAGGTACCAGCAAGATGTTTTGGTGTTAGAAAGCCAT
GATCGACCTGGAGGTGCTGCTCATTCCTTTAAGATCAGAGACTATGAATTCGACTCGGGT
CCATCTCTATTCTCTGGGTTCCAGTCAAGAGGCCCTCAGGCCAATCCCCTAGCACAAGTT
CTTGATGCATTAGGTGAGTCAGTTCCATGTGCCAACTACGATTCATGGATGGTTTACATA
CCTGAAGGTGAATTCTTATCTCGCATTGGCGCCACAGAATTTTTCAAGGATCTTGAGAAG
TATGCAAGTCGGGATGCTGTGCGAGAATGGCAAAAACTTCTTGATGCAGTACTTCCGATG
TCTGCAGCTGCAATGGCTCTGCCTCCTCTATCAATCCGGGGTGATTTGGGCGTTATTTCC
ACTGCTGCAACTAGATATGCCCCCTCGCTCTTGAAATCATTTGTTCAAATGGGACCTCAG
GGAGCTCTTGGTGCTACTAAACTTCTCAGACCCTTCTCGGAAATCATGGATTCACTGGAC
CTGAAAGACCCCTTTATACGAAACTGGGTGGATCTCCTGGCTTTCCTGCTAGCAGGGGTG
AAATCTAATGGTATACTCTCAGCAGAGATGGTTTACATGTTTGCAGAATGGTACAAGCCA
GGTTGCACTCTTGAGTATCCTCTTCAAGGAACCGGGGCAGTGGTTGATGCACTTGTCCGG
GGGATGCAGAAGTTTGGAGGGCGGCTATCTCTTGAAAGCCATGTTGAAAAAATTGTTGTT
GAAAATGATCAAGCCATAGGAGTGAAGCTAAGAAGTGGTCAGTTCATACGTGCTAAGAAG
GCTGTTGTCAGCAATGCATCTATGTGGGACACTTTGAATCTGTTACCTAAGGAAGTAGTT
CCTAAATCATATCAAGACAGGATTAAGACAACCCCTCAATGTGAGTCATTCATGCATCTC
CATTTGGGTTTTGATGCAGAGGGCATACCAGAGGACTTGGGAATTCATCATATAGTCGTA
AACAATTGGGATAGAGGAGTTGACGCTGATCAGAATGTTGTTTTGATATCTGTACCTAGC
GTACTTAGTCCCAATCTTGCACCTCCTGGGAAACATGTGTTGCATGCTTATACACCAGGA
ACTGAACCATTTGAACTCTGGGAAGGACTTGATCGTAGAAGTGGTGAATACAGAAAGCTC
AAAGCTGAAAGATCAGAGGTAATGTGGAGAGCGGTGGAGCGTGTACTTGGTCCAGGTTTT
AAACAGGAGAAGTGTGAAGTGAAGTTGGTAGGAACGCCATTAACACATCAAAGGTTTCTC
CGAAGGAACAGGGGAACCTATGGGCCAGCCATGCAAGCTGGCAAAGACACCTTCCCAGGA
CATTCAACTCCAATCTCACATCTCTATTGCTGTGGAGATTCTACATTTCCCGGAATTGGA
GTCCCTGCAGTAGCTGCCAGCGGTGCCATCGTTGCTAACTCCCTGGTTTCTGTCTCTCAA
CATTCCCAGCTTCTTGATGCCATTGGAATTTGACTGCCCTGGTGAGTTCAGTTTATCTTT
TTCTGGAATATTCATTCATGTTGGTTACTTTCTCCGGCTTTTAGCATACCCTCTCAAACT
TTGGATTCTTTCCATGTACAACAATTGTATAGCATCAGATAATGTAAATCATAACATTAC
ATGTTTGATGAGAGTATTTGGTTGCAATTCTTTCTACCATTGTCCCCTGAAGCCATACTA
GA