Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0035g01040.t01
CDS Infomation

cds chromosome:12X:12:20776500:20788440:-1 gene:VIT_12s0035g01040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGTTAAGGTTTCAGCTGAGAAAGCTGCTGAAATTGCAATTGGGTCAATTGGACGG
GGGTATGATATTTCGGATGATTTGCGGCTCAAGTATTGTAAGGGAGATTTGGTTGATTCG
CGGTTGATTGAGATTGATGAGGAGTCAGTTCGTGAAATTGTGTTGCCTGGTGGGATTTCG
ATTCCAAATGCATCCAAATCAATAAAGTGTGATAAAGGGGAACGAACCCGGTTTCGGTCT
GATGTTCTTTCTTTCCAACAGATGTCAGAGCAATTCAACCAGGAGATATCCTTGACTGGT
AAAATTCCATCAGGCCTCTTCAATGCTATGTTTGAATTTTCAGGCTGTTGGCAGAAAGAT
GCAGCTAAGACAAAAACTCTTGCTTTTGATGGGGTATTCATCACACTCTACACTGTTGCA
CTAGAGAAATCACAGATGGTACTTCGTGAACATGTTAAGAACGCTGTTCCATCATCATGG
GATCCTGCTGCCTTGGCAAGGTTTATTGAAACATTTGGCACCCATATTATAGTTGGTGTG
AAGATGGGCGGGAAGGATGTAATATATGTTAGACAGCAGCATGCTTCACCTCTTCAACCT
GCTGATGTACAGAAAAGGGTAAAGGAGATGGCAGATAAGAGGTTTGTAGATGCAAGTGGT
CAATATGGCATGAATTCTGGACATGTTTATCAGGATGACAAGTTTGAAATCAGGGAGCAG
CGGCTGAGGTTTGCAGATACCAGTCCGTCAAGTTCTTATTCACATAAGGATGATATTGTG
AGCATTTGCAAAAGGAGAGGTGGAAGCGATAACAAGAACCTATCCCATAATGAGTGGTTG
CAAACTGTTCAGTCTGCACCTGATGTGATATCAATGTCCTTTATCCCAATTACCTCTTTG
TTGAATGGAGTCCAAGGGAGTGGATTCTTGAGCCATGCCATAAATCTCTATTTACGATAT
AAACCACCCATTGAAGAACTACGCCAGTTTTTGGAATTTCAACTGCCAAGGCAGTGGGCA
CCAGTGTTCAGTGAACTTCCTCTTGGTCCACAAAGGAGGCAACAAAACAGTGCATTTTTG
CAGTTCAGCTTCATGGGTCCCAAGCTTTATGTGAATACCAATCCGGTTGATGTGGGTAAG
CGGCCAGTGACAGGCCTCAGGCTCTATCTAGAAGGTAAAAGAAGCAACCGATTAGCGATC
CACTTGCAGCACCTCTCTTCCCTCCCAAAAATCTTCCAACTCGAAGATGATCCTAGTGCC
AACTTCCGTCATGAGACCTACGACCACAAGTACTACGAGAAAGTTCAATGGAAGAACTTT
TCACATGTATGCACTGCTCCTGTTCAGGCTGACGATGACTTTTCTATAGTAACTGGAGCC
CAACTACAAGTTGGGGGTTACGGCTTTAAAAAGGTCCTCTTCCTACGACTCCGCTTCTCA
ACTGTTTCAGGAGCCATGCTGGTAAAGGCTCCAGAGTGGGATGGATCACCGGGCTTGGCT
CAGAAGTCTGGACTCATATCCACTCTAATCAGCCATCCCTTCACAACAGTTCAAAAGCCG
CCTCCACGGCCTGCTGATGTGAACATAAACTCTGCCGTCTACCCAGGGGGCCCACCAGTG
CCTGTCCAAGCACCGAGGCTTCTGAAGTTTGTCGATGCAACAGAGATGACAAGAGGACCA
CAGGAAACTCCTGGCTACTGGGTTGTTTCTGGAGCAAGACTTATGCTCGAAAAGGGCAGG
ATCTCACTCAAGGTTAAATTTTCTTTACTAACTGTACTCTTATCTGATGAAGAAGCACCC
GAGGAACCCTAG

Peptide Sequence

PEP ID

VIT_12s0035g01040.t01
PEP Infomation

pep chromosome:12X:12:20776500:20788440:-1 gene:VIT_12s0035g01040 transcript:VIT_12s0035g01040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAVKVSAEKAAEIAIGSIGRGYDISDDLRLKYCKGDLVDSRLIEIDEESVREIVLPGGIS
IPNASKSIKCDKGERTRFRSDVLSFQQMSEQFNQEISLTGKIPSGLFNAMFEFSGCWQKD
AAKTKTLAFDGVFITLYTVALEKSQMVLREHVKNAVPSSWDPAALARFIETFGTHIIVGV
KMGGKDVIYVRQQHASPLQPADVQKRVKEMADKRFVDASGQYGMNSGHVYQDDKFEIREQ
RLRFADTSPSSSYSHKDDIVSICKRRGGSDNKNLSHNEWLQTVQSAPDVISMSFIPITSL
LNGVQGSGFLSHAINLYLRYKPPIEELRQFLEFQLPRQWAPVFSELPLGPQRRQQNSAFL
QFSFMGPKLYVNTNPVDVGKRPVTGLRLYLEGKRSNRLAIHLQHLSSLPKIFQLEDDPSA
NFRHETYDHKYYEKVQWKNFSHVCTAPVQADDDFSIVTGAQLQVGGYGFKKVLFLRLRFS
TVSGAMLVKAPEWDGSPGLAQKSGLISTLISHPFTTVQKPPPRPADVNINSAVYPGGPPV
PVQAPRLLKFVDATEMTRGPQETPGYWVVSGARLMLEKGRISLKVKFSLLTVLLSDEEAP
EEP

Transcript Sequence

Transcript ID

VIT_12s0035g01040.t01
Transcript Infomation

cdna chromosome:12X:12:20776500:20788440:-1 gene:VIT_12s0035g01040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACTCGCGCTCCCATTCTCTGCCGATGTTTCTCCATTTTGCTCTAATTTTACTGTAATTTC
AGCTTAATGTGCTGGAAGTGGTGGAGATGATGTTCTTGATGTTGTTTTGGTGGTGGTGGT
GATGTTCTGGAGATTTGATGGAGTATGCTTGAAATTGGGTGGGTGCAGAGTGATGCTAGA
GTAATGGCAGTTAAGGTTTCAGCTGAGAAAGCTGCTGAAATTGCAATTGGGTCAATTGGA
CGGGGGTATGATATTTCGGATGATTTGCGGCTCAAGTATTGTAAGGGAGATTTGGTTGAT
TCGCGGTTGATTGAGATTGATGAGGAGTCAGTTCGTGAAATTGTGTTGCCTGGTGGGATT
TCGATTCCAAATGCATCCAAATCAATAAAGTGTGATAAAGGGGAACGAACCCGGTTTCGG
TCTGATGTTCTTTCTTTCCAACAGATGTCAGAGCAATTCAACCAGGAGATATCCTTGACT
GGTAAAATTCCATCAGGCCTCTTCAATGCTATGTTTGAATTTTCAGGCTGTTGGCAGAAA
GATGCAGCTAAGACAAAAACTCTTGCTTTTGATGGGGTATTCATCACACTCTACACTGTT
GCACTAGAGAAATCACAGATGGTACTTCGTGAACATGTTAAGAACGCTGTTCCATCATCA
TGGGATCCTGCTGCCTTGGCAAGGTTTATTGAAACATTTGGCACCCATATTATAGTTGGT
GTGAAGATGGGCGGGAAGGATGTAATATATGTTAGACAGCAGCATGCTTCACCTCTTCAA
CCTGCTGATGTACAGAAAAGGGTAAAGGAGATGGCAGATAAGAGGTTTGTAGATGCAAGT
GGTCAATATGGCATGAATTCTGGACATGTTTATCAGGATGACAAGTTTGAAATCAGGGAG
CAGCGGCTGAGGTTTGCAGATACCAGTCCGTCAAGTTCTTATTCACATAAGGATGATATT
GTGAGCATTTGCAAAAGGAGAGGTGGAAGCGATAACAAGAACCTATCCCATAATGAGTGG
TTGCAAACTGTTCAGTCTGCACCTGATGTGATATCAATGTCCTTTATCCCAATTACCTCT
TTGTTGAATGGAGTCCAAGGGAGTGGATTCTTGAGCCATGCCATAAATCTCTATTTACGA
TATAAACCACCCATTGAAGAACTACGCCAGTTTTTGGAATTTCAACTGCCAAGGCAGTGG
GCACCAGTGTTCAGTGAACTTCCTCTTGGTCCACAAAGGAGGCAACAAAACAGTGCATTT
TTGCAGTTCAGCTTCATGGGTCCCAAGCTTTATGTGAATACCAATCCGGTTGATGTGGGT
AAGCGGCCAGTGACAGGCCTCAGGCTCTATCTAGAAGGTAAAAGAAGCAACCGATTAGCG
ATCCACTTGCAGCACCTCTCTTCCCTCCCAAAAATCTTCCAACTCGAAGATGATCCTAGT
GCCAACTTCCGTCATGAGACCTACGACCACAAGTACTACGAGAAAGTTCAATGGAAGAAC
TTTTCACATGTATGCACTGCTCCTGTTCAGGCTGACGATGACTTTTCTATAGTAACTGGA
GCCCAACTACAAGTTGGGGGTTACGGCTTTAAAAAGGTCCTCTTCCTACGACTCCGCTTC
TCAACTGTTTCAGGAGCCATGCTGGTAAAGGCTCCAGAGTGGGATGGATCACCGGGCTTG
GCTCAGAAGTCTGGACTCATATCCACTCTAATCAGCCATCCCTTCACAACAGTTCAAAAG
CCGCCTCCACGGCCTGCTGATGTGAACATAAACTCTGCCGTCTACCCAGGGGGCCCACCA
GTGCCTGTCCAAGCACCGAGGCTTCTGAAGTTTGTCGATGCAACAGAGATGACAAGAGGA
CCACAGGAAACTCCTGGCTACTGGGTTGTTTCTGGAGCAAGACTTATGCTCGAAAAGGGC
AGGATCTCACTCAAGGTTAAATTTTCTTTACTAACTGTACTCTTATCTGATGAAGAAGCA
CCCGAGGAACCCTAGCAGAGTGTACTATCTTCCCTTTTAAACGGCAAATGAGTTTTACAT
TGAGGCATGGGTGACAAGCATCGAAACTGAAAGCAACATACGGGTGAAGGAGGAGCTTAC
AAGGTGGGGAAGATGAGGGAGAGAGCTTGGAAGCGAGTCGGAATTTGTTCTGTTGGTTGT
GTCAACAGTTTTCATTGTCCTTCATCAGTGTTGGTGGTTGTGTTTGTAACCTTGTGTTTC
CATTGTAGATTCTTCGCACTGCTGCCTGTGATTGGGTTACAAGGTATTTTTACACCTTTC
TGCATTTCTCCCCGGTTTACACAATTGCAGTAATCCCTGGACTCCCCGAAACTACGATTC
GTTGTATCCAGCAGTCCTACCTCTATCCAACCCAACAGGTATGTAAATTGGTCCATGATC
ACAGTGTTGTTTT