Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_12s0035g00960.t01
CDS Infomation	cds chromosome:12X:12:20577013:20595132:-1 gene:VIT_12s0035g00960 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase [Source:UniProtKB/TrEMBL;Acc:D7TGT5]
Sequence	ATGTCAGATATCAATGCGACGTCTATATCTGAGAGTGCACGATCAGACTCTCCAAAGCAC TTGCTCAATCGACGGTCCGAATCTCCCCAACGGCCTTCAAAGATCGCCAGAACGGACGAT CTCAGTGACGGCGAACAGCAGGACTCTGTCGCTTCCAAAACCATGACCCAGAACCCTAGA GTTCAGAGGTACTTGGTTGCGGTTGAGTATATTGGGACTCGGTTCTCCGGCTCGCAACAG CAGCTGAATTGCAGAACAGTGGCTGGTGCTCTTCAGGAAGCTTTTCATAAATTTATTGGA CAGCCGGTTTCGATCTTTTGCTCAAGTCGAACTGATGCAGGAGTGCATGCCTTGTCAAAT GTCTGCCATGTAGATGTTGAACGCATAAGCAAAAGGAAGCCTGGTGAAGTGTTACCACCT CATGAACCTGCAGTTGTTCGGAGAGCTGTGAACCATTTCTTACAGAAGAATGAAGGTGAC GTAATGGTGATTGATGTTCGTTGTGTTCCACCTGATTTTCATGCTAGATATAAAGCTCGA GAGCGAACGTACTTCTACCGCTTGCTGTCTGGACCAGAGCCTTTGTCAAGCTTTGAGAAA GATCGGGCTTGGCATGTACCTGAGGACCTAGATCTTCTTGCTATGCAGAAAGCATGCAGG GTTCTTGTTGGATGTCATGATTTTAGTTCCTTCAGGGCAGCTGGTTGTCAGGCAAAGTCA CCTATCAGAACTTTAGATGAACTCTGTGTTTCTGAGGTACTGCCAACTCCATATTTTCCA TCAATCACTGAGAGGGCACAAAATAATTTCACGGAGGAGAATCCCCTTGCTTGCTCCAAC AATGCTGAAGTGCCTGATAGCCCTTCTACCGCCAATCATGATAGATTAGATGGCTTCAAC GGTGCTGGTCAAGGATTTGGCGTAAGGAGAAGACACCGATGCTTTTTGGTAACTGCACGG GCACGCTCTTTTCTCTATCACCAGGTTAGACTGCTCGTGGGTGTTATCAAATGTGTTGGC ACTGGAGACCTAACAGTTTCCGACGTCGAAAGGATCCTGAACGCAAAGACAGTGACTGCT GCAAGTCCCATGGCCCCTGCTTGCGGTCTTTACCTTGGAAACGTGAATTATGATCTTCCC TGA

Peptide Sequence

PEP ID	VIT_12s0035g00960.t01
PEP Infomation	pep chromosome:12X:12:20577013:20595132:-1 gene:VIT_12s0035g00960 transcript:VIT_12s0035g00960.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase [Source:UniProtKB/TrEMBL;Acc:D7TGT5]
Sequence	MSDINATSISESARSDSPKHLLNRRSESPQRPSKIARTDDLSDGEQQDSVASKTMTQNPR VQRYLVAVEYIGTRFSGSQQQLNCRTVAGALQEAFHKFIGQPVSIFCSSRTDAGVHALSN VCHVDVERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDVMVIDVRCVPPDFHARYKAR ERTYFYRLLSGPEPLSSFEKDRAWHVPEDLDLLAMQKACRVLVGCHDFSSFRAAGCQAKS PIRTLDELCVSEVLPTPYFPSITERAQNNFTEENPLACSNNAEVPDSPSTANHDRLDGFN GAGQGFGVRRRHRCFLVTARARSFLYHQVRLLVGVIKCVGTGDLTVSDVERILNAKTVTA ASPMAPACGLYLGNVNYDLP

Transcript Sequence

Transcript ID	VIT_12s0035g00960.t01
Transcript Infomation	cdna chromosome:12X:12:20577013:20595132:-1 gene:VIT_12s0035g00960 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase [Source:UniProtKB/TrEMBL;Acc:D7TGT5]
Sequence	ATGTCAGATATCAATGCGACGTCTATATCTGAGAGTGCACGATCAGACTCTCCAAAGCAC TTGCTCAATCGACGGTCCGAATCTCCCCAACGGCCTTCAAAGATCGCCAGAACGGACGAT CTCAGTGACGGCGAACAGCAGGACTCTGTCGCTTCCAAAACCATGACCCAGAACCCTAGA GTTCAGAGGTACTTGGTTGCGGTTGAGTATATTGGGACTCGGTTCTCCGGCTCGCAACAG CAGCTGAATTGCAGAACAGTGGCTGGTGCTCTTCAGGAAGCTTTTCATAAATTTATTGGA CAGCCGGTTTCGATCTTTTGCTCAAGTCGAACTGATGCAGGAGTGCATGCCTTGTCAAAT GTCTGCCATGTAGATGTTGAACGCATAAGCAAAAGGAAGCCTGGTGAAGTGTTACCACCT CATGAACCTGCAGTTGTTCGGAGAGCTGTGAACCATTTCTTACAGAAGAATGAAGGTGAC GTAATGGTGATTGATGTTCGTTGTGTTCCACCTGATTTTCATGCTAGATATAAAGCTCGA GAGCGAACGTACTTCTACCGCTTGCTGTCTGGACCAGAGCCTTTGTCAAGCTTTGAGAAA GATCGGGCTTGGCATGTACCTGAGGACCTAGATCTTCTTGCTATGCAGAAAGCATGCAGG GTTCTTGTTGGATGTCATGATTTTAGTTCCTTCAGGGCAGCTGGTTGTCAGGCAAAGTCA CCTATCAGAACTTTAGATGAACTCTGTGTTTCTGAGGTACTGCCAACTCCATATTTTCCA TCAATCACTGAGAGGGCACAAAATAATTTCACGGAGGAGAATCCCCTTGCTTGCTCCAAC AATGCTGAAGTGCCTGATAGCCCTTCTACCGCCAATCATGATAGATTAGATGGCTTCAAC GGTGCTGGTCAAGGATTTGGCGTAAGGAGAAGACACCGATGCTTTTTGGTAACTGCACGG GCACGCTCTTTTCTCTATCACCAGGTTAGACTGCTCGTGGGTGTTATCAAATGTGTTGGC ACTGGAGACCTAACAGTTTCCGACGTCGAAAGGATCCTGAACGCAAAGACAGTGACTGCT GCAAGTCCCATGGCCCCTGCTTGCGGTCTTTACCTTGGAAACGTGAATTATGATCTTCCC TGAATTCATGTTTCGGGAAAATCGCTATTTCTTCAGAAACATGCATCACCAGCATTATCC ATGGGAAGAACTCGCCCTTGGATGTTGGAACTGCTCGATCAACAAAGTTGTCCGAAGAAT AAATAGCAATGAAAAGTATGTGAAAATTTGTTTGAAATAAGCAAATTTTTTGGATGTGGA ATCAATTGATGCTGGCTTTAACTTCTATAGAGATTGATTTAATTTAAATCC