Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0035g00850.t01
CDS Infomation

cds chromosome:12X:12:20425401:20443065:-1 gene:VIT_12s0035g00850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACTGCTCCGATTCGCCCTACGATCTTCTCTTCAAATCGCTCTCTCTCATCCCAATC
TCTCACTACTTGCTTGGATTTCTGCTCCTTTCTCTCGTTTTCCTCTACAATTTCCTCGAA
ATTCATCTCCTTCGTGACCTGATTGCCACTGGATTCAGAGGCCATCCGGTATCGTTGACC
TTCGCCTCGGGCTCCGAACTCTACGAGGCCGTTGCTTCCAAGTGTCAGATTCTTCACGGA
AGGTATTTGGCTACTTCATGGCTTTCCAGTCCTCATCTTCAAACTGCATTTTTGAGCTTC
TTTGGGAGGCCTCCTGTTTTCAGCTATAGAAGACAGCTATTCCATACATCTGATGGTGGA
ACAATTGCTTTGGACTGGCTGATGAATTCTGATGTTATGGGAGTAGCCATCAACATGAAT
GATACTATTCGGAAAGATGATAAAACTCCTATTGTTGTTGTGATTCCTGGCCTAACAAGT
GATTCGGCTTCTGCTTATATAAAGCATCTTGCATTCAAGATGGCAAAAAGCGGCTGGAAT
GTTGTGGTGAGCAATCATCGAGGGCTGGGTGGCATATCAGTTACTTCTGATTGCATGTAC
AATGCTGGATGGACAGAGGATATAAGGAAAATTGTTGATCATCTTCATTGTCAGTATCCA
GAGGCTCCTCTATTTGCTGTTGGAACTAGCATTGGTGCTAATGTTCTGGTAAAATATCTT
GGAGAGGATGGGGTTAATATTCCTCTTGTTGGTGCTGCTGCCATCTGTTCTACATGGGAT
CTTTTGATATGTGACAGATTCATTAACCGCAAGCTTGTACAGAAATTCTATGACAAAGCT
CTAACAATTGGCCTACAAGGTTATGCCCAATTGCATCAACCGATCTTATCTCGTCTTGCT
GATTGGGAAGGCATTAAAAAGTCACGTTCTGTTCGAGACTTCGACAACTATGCAACCCGT
CTCGTTGGAAAATATGAGACTGTGGATACATATTACAGGCGTTGTAGTAGTGCTAGTTTT
GTGGGAAATGTATCAGTACCACTCCTCTGTATCAGCACTTTGGATGATCCAGTCTGTACA
AGAGAAGCCATTCCTTGGGATGAATGCAAGGCAAATAAAAATATTATCCTAGCAACCACA
AAGCACGGAGGACATCTAGGATTTTTTGAAGGGCTCACTGCAAAAAGCTTGTGGTGGGTA
AGGGCTGTTGATGAGTTCTTCAATGTCCTACACTCAACCGAATTTATTCACAGAAAAAAA
GAGGCTCAGGTCTCCCCATTGCCCGTTCCGCTAGAATCCTCAATCGATCAGGGTCCATAT
GTTAACGTTACCAAAGATGGCATGGTGACTGCAATAGGCAACAAGCAAACCAACATGGAA
GAGGAAGAAGAATTATGCCATGAGCACACGCTTCACACCGAGAAAGATGAAGACAAGGTT
TCAGTTGCAGAAGCCAGTGGTAACAAAAGCAAAGAAAGAACACATTCGAAGACTGAACTC
AGCCAGCCATCCGAACATGACCGTAGCCGTGTAACTGCTCCTGTAAAGAGACGCATGGAT
CAGCTGTCCCGATACAGTAGGAAATCAATCTGGCTGCTGGTGTACATTGCCATTGTTACG
ACTTGGCCGCTGGTTGGCTCGGCCCTTCTGCTGACCTTGAAGAAGAAATTCAAAAATGTC
TTACCGGCAGCTCTGCTCGGTAGATAG

Peptide Sequence

PEP ID

VIT_12s0035g00850.t01
PEP Infomation

pep chromosome:12X:12:20425401:20443065:-1 gene:VIT_12s0035g00850 transcript:VIT_12s0035g00850.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDCSDSPYDLLFKSLSLIPISHYLLGFLLLSLVFLYNFLEIHLLRDLIATGFRGHPVSLT
FASGSELYEAVASKCQILHGRYLATSWLSSPHLQTAFLSFFGRPPVFSYRRQLFHTSDGG
TIALDWLMNSDVMGVAINMNDTIRKDDKTPIVVVIPGLTSDSASAYIKHLAFKMAKSGWN
VVVSNHRGLGGISVTSDCMYNAGWTEDIRKIVDHLHCQYPEAPLFAVGTSIGANVLVKYL
GEDGVNIPLVGAAAICSTWDLLICDRFINRKLVQKFYDKALTIGLQGYAQLHQPILSRLA
DWEGIKKSRSVRDFDNYATRLVGKYETVDTYYRRCSSASFVGNVSVPLLCISTLDDPVCT
REAIPWDECKANKNIILATTKHGGHLGFFEGLTAKSLWWVRAVDEFFNVLHSTEFIHRKK
EAQVSPLPVPLESSIDQGPYVNVTKDGMVTAIGNKQTNMEEEEELCHEHTLHTEKDEDKV
SVAEASGNKSKERTHSKTELSQPSEHDRSRVTAPVKRRMDQLSRYSRKSIWLLVYIAIVT
TWPLVGSALLLTLKKKFKNVLPAALLGR

Transcript Sequence

Transcript ID

VIT_12s0035g00850.t01
Transcript Infomation

cdna chromosome:12X:12:20425401:20443065:-1 gene:VIT_12s0035g00850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACTGCTCCGATTCGCCCTACGATCTTCTCTTCAAATCGCTCTCTCTCATCCCAATC
TCTCACTACTTGCTTGGATTTCTGCTCCTTTCTCTCGTTTTCCTCTACAATTTCCTCGAA
ATTCATCTCCTTCGTGACCTGATTGCCACTGGATTCAGAGGCCATCCGGTATCGTTGACC
TTCGCCTCGGGCTCCGAACTCTACGAGGCCGTTGCTTCCAAGTGTCAGATTCTTCACGGA
AGGTATTTGGCTACTTCATGGCTTTCCAGTCCTCATCTTCAAACTGCATTTTTGAGCTTC
TTTGGGAGGCCTCCTGTTTTCAGCTATAGAAGACAGCTATTCCATACATCTGATGGTGGA
ACAATTGCTTTGGACTGGCTGATGAATTCTGATGTTATGGGAGTAGCCATCAACATGAAT
GATACTATTCGGAAAGATGATAAAACTCCTATTGTTGTTGTGATTCCTGGCCTAACAAGT
GATTCGGCTTCTGCTTATATAAAGCATCTTGCATTCAAGATGGCAAAAAGCGGCTGGAAT
GTTGTGGTGAGCAATCATCGAGGGCTGGGTGGCATATCAGTTACTTCTGATTGCATGTAC
AATGCTGGATGGACAGAGGATATAAGGAAAATTGTTGATCATCTTCATTGTCAGTATCCA
GAGGCTCCTCTATTTGCTGTTGGAACTAGCATTGGTGCTAATGTTCTGGTAAAATATCTT
GGAGAGGATGGGGTTAATATTCCTCTTGTTGGTGCTGCTGCCATCTGTTCTACATGGGAT
CTTTTGATATGTGACAGATTCATTAACCGCAAGCTTGTACAGAAATTCTATGACAAAGCT
CTAACAATTGGCCTACAAGGTTATGCCCAATTGCATCAACCGATCTTATCTCGTCTTGCT
GATTGGGAAGGCATTAAAAAGTCACGTTCTGTTCGAGACTTCGACAACTATGCAACCCGT
CTCGTTGGAAAATATGAGACTGTGGATACATATTACAGGCGTTGTAGTAGTGCTAGTTTT
GTGGGAAATGTATCAGTACCACTCCTCTGTATCAGCACTTTGGATGATCCAGTCTGTACA
AGAGAAGCCATTCCTTGGGATGAATGCAAGGCAAATAAAAATATTATCCTAGCAACCACA
AAGCACGGAGGACATCTAGGATTTTTTGAAGGGCTCACTGCAAAAAGCTTGTGGTGGGTA
AGGGCTGTTGATGAGTTCTTCAATGTCCTACACTCAACCGAATTTATTCACAGAAAAAAA
GAGGCTCAGGTCTCCCCATTGCCCGTTCCGCTAGAATCCTCAATCGATCAGGGTCCATAT
GTTAACGTTACCAAAGATGGCATGGTGACTGCAATAGGCAACAAGCAAACCAACATGGAA
GAGGAAGAAGAATTATGCCATGAGCACACGCTTCACACCGAGAAAGATGAAGACAAGGTT
TCAGTTGCAGAAGCCAGTGGTAACAAAAGCAAAGAAAGAACACATTCGAAGACTGAACTC
AGCCAGCCATCCGAACATGACCGTAGCCGTGTAACTGCTCCTGTAAAGAGACGCATGGAT
CAGCTGTCCCGATACAGTAGGAAATCAATCTGGCTGCTGGTGTACATTGCCATTGTTACG
ACTTGGCCGCTGGTTGGCTCGGCCCTTCTGCTGACCTTGAAGAAGAAATTCAAAAATGTC
TTACCGGCAGCTCTGCTCGGTAGATAGAACCTCCTACAGGTAACTTCATTCTACCTCATG
AACAACTTCTATTCCTTGGAATAAATAAATAAATAAATCATTAAAAAAAAATCAAAATAA
TAGCATCCATAATCAGGAAATTTAGGCCCATCGATCGATCGGCTCCGAATTTGGATGTTA
AAATCTGTGTTGATATCGGAATGATTGCCTGTAAAATGGGTGGGATAATAATAAATCCAG
ATGTATAACATTTCACCGGAACTTGATTTTGTTGTAATACTTGGACTTTGTAAGCTATTT
GTTTTACAGATTACATTTTCACCAGGTCTAGATATTGTTGTAATGCTTCTTTTGGAACAT
GGGAATGGGAGAGGGAA