Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0035g00840.t01
CDS Infomation

cds chromosome:12X:12:20417297:20424572:1 gene:VIT_12s0035g00840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGAGATCCGCCTCTTCTCTTCGCCACTGCCTCGTCTTACTCGCCCTGCTCGCTCTC
TTATTTATCCACGTGTCCCATGCAGTTGACCACCACTTCGAAGGCTTCGACTCTGACGAT
GTTGCCGAAGACGAAGAGCCGGTCGCCGGAACCCTAGACCACCCACCTCCGATCCAACTC
ACCCTTACTCACTCCGATCCCACTCACTCCGATCTGCCACCGCCGGATCGGGAACAAGAG
GAAGTTTCGGAGCCTTCTCAGCCATCCGATCTCCCACCGAAGCCCTCATCCAACGGCCTT
GATTACTGGGACGAGGACGAGTTCGAAGGTCTCCCTGAAGAACAGTCCCCGGAGCCCCCG
AAATTGACCGAAAATGTCATTCCGAAGGACCCTAGCTCCGATCCGAATAAGGCCGCGAAG
CCCCAAAAGACCGCCGTTTCGAGATCGTACGTAGTCGAAATTGTGTGCATATCCTTCTTG
ATCATGTTCACAATCAACTACTTTACCGGAAAGCGAGAGAATGAGAACATCGCATTGGCG
TGGGCGGCGAAATTCGCGACGAAAGATTCGATTTTCGACAAGAATTTCAGCCTTTTGGGC
GTCGGAGACGGCGACGACACGCCGTTGTTGTTGAAGGAAGGGCAAAACGTGTTTAAATTT
TATGCGAGTGGCCGGAGGTATTGTTCGGGGCTGTTGGCGACGATGGAGTTGCAGAGTAGG
CATGATCTGATATCGAGGTTATGCAATTTGGTGGTGAGGGGAAGGGATGAGATCAGTTTC
GAGGTGTATATGAATGAAGAGGCGATGGATCAAGTGGTTTTTGCGTTGGCGAGAAGGAAG
GCGGCCAAGGGGATGCAGAAGGAGGAAAGGGACTTGCAGAGGTATGCGAGTTTATTGTCT
GGGCCTACGGGTGGGCGCAAGTGGGTGGTAGAGGAGTTGGCGGTCATTTCGGAGTCGAAG
GAGGTGGCGGGAGATTTGATTACCGAGGCAGTGCTTGAGCAGGTTTTTGGTGAGAAAGCT
TTTGAGAAGTTTGGGAAGGGTTTCATATCGATGCATTTCTCTGATCAACAATTGGGGACA
CACAAGAAGATGCTGCTGTTCAAGTTTGCTCTCCCAGATGCCAAGAACATGGCTCACATG
ACTCGGCTGGTGGCTCTCATACCCTATTACATTGATTTAATCGGGCGGTACAAACTAAGT
TCACAGGCAAGGTCGAAAACAGACTCAGCCAGATCAAAGGCTGCCCAAGAGGCATACAAA
GAACAACAAAACGCTAGACAAGAAGCCTTGCAGAAGCGGAAGGCAGAGAGGAAAAAGATG
ATGGAGGAGGCAGAGGCAAAGCTGAGCGCAGAAATAATCCGCAAGAAAGAGGCTAAGGAT
CGTGCCCGTCAAGCGAAGAAGGCAATGCCAAGGGTGAGGATGACTCGTGCTCACTAG

Peptide Sequence

PEP ID

VIT_12s0035g00840.t01
PEP Infomation

pep chromosome:12X:12:20417297:20424572:1 gene:VIT_12s0035g00840 transcript:VIT_12s0035g00840.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MARSASSLRHCLVLLALLALLFIHVSHAVDHHFEGFDSDDVAEDEEPVAGTLDHPPPIQL
TLTHSDPTHSDLPPPDREQEEVSEPSQPSDLPPKPSSNGLDYWDEDEFEGLPEEQSPEPP
KLTENVIPKDPSSDPNKAAKPQKTAVSRSYVVEIVCISFLIMFTINYFTGKRENENIALA
WAAKFATKDSIFDKNFSLLGVGDGDDTPLLLKEGQNVFKFYASGRRYCSGLLATMELQSR
HDLISRLCNLVVRGRDEISFEVYMNEEAMDQVVFALARRKAAKGMQKEERDLQRYASLLS
GPTGGRKWVVEELAVISESKEVAGDLITEAVLEQVFGEKAFEKFGKGFISMHFSDQQLGT
HKKMLLFKFALPDAKNMAHMTRLVALIPYYIDLIGRYKLSSQARSKTDSARSKAAQEAYK
EQQNARQEALQKRKAERKKMMEEAEAKLSAEIIRKKEAKDRARQAKKAMPRVRMTRAH

Transcript Sequence

Transcript ID

VIT_12s0035g00840.t01
Transcript Infomation

cdna chromosome:12X:12:20417297:20424572:1 gene:VIT_12s0035g00840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTACTCTCACAATACCACCTTCGATTTTCTTTCTCGCTCTCTCGTTCTCGATACATCGAT
GGCGAGATCCGCCTCTTCTCTTCGCCACTGCCTCGTCTTACTCGCCCTGCTCGCTCTCTT
ATTTATCCACGTGTCCCATGCAGTTGACCACCACTTCGAAGGCTTCGACTCTGACGATGT
TGCCGAAGACGAAGAGCCGGTCGCCGGAACCCTAGACCACCCACCTCCGATCCAACTCAC
CCTTACTCACTCCGATCCCACTCACTCCGATCTGCCACCGCCGGATCGGGAACAAGAGGA
AGTTTCGGAGCCTTCTCAGCCATCCGATCTCCCACCGAAGCCCTCATCCAACGGCCTTGA
TTACTGGGACGAGGACGAGTTCGAAGGTCTCCCTGAAGAACAGTCCCCGGAGCCCCCGAA
ATTGACCGAAAATGTCATTCCGAAGGACCCTAGCTCCGATCCGAATAAGGCCGCGAAGCC
CCAAAAGACCGCCGTTTCGAGATCGTACGTAGTCGAAATTGTGTGCATATCCTTCTTGAT
CATGTTCACAATCAACTACTTTACCGGAAAGCGAGAGAATGAGAACATCGCATTGGCGTG
GGCGGCGAAATTCGCGACGAAAGATTCGATTTTCGACAAGAATTTCAGCCTTTTGGGCGT
CGGAGACGGCGACGACACGCCGTTGTTGTTGAAGGAAGGGCAAAACGTGTTTAAATTTTA
TGCGAGTGGCCGGAGGTATTGTTCGGGGCTGTTGGCGACGATGGAGTTGCAGAGTAGGCA
TGATCTGATATCGAGGTTATGCAATTTGGTGGTGAGGGGAAGGGATGAGATCAGTTTCGA
GGTGTATATGAATGAAGAGGCGATGGATCAAGTGGTTTTTGCGTTGGCGAGAAGGAAGGC
GGCCAAGGGGATGCAGAAGGAGGAAAGGGACTTGCAGAGGTATGCGAGTTTATTGTCTGG
GCCTACGGGTGGGCGCAAGTGGGTGGTAGAGGAGTTGGCGGTCATTTCGGAGTCGAAGGA
GGTGGCGGGAGATTTGATTACCGAGGCAGTGCTTGAGCAGGTTTTTGGTGAGAAAGCTTT
TGAGAAGTTTGGGAAGGGTTTCATATCGATGCATTTCTCTGATCAACAATTGGGGACACA
CAAGAAGATGCTGCTGTTCAAGTTTGCTCTCCCAGATGCCAAGAACATGGCTCACATGAC
TCGGCTGGTGGCTCTCATACCCTATTACATTGATTTAATCGGGCGGTACAAACTAAGTTC
ACAGGCAAGGTCGAAAACAGACTCAGCCAGATCAAAGGCTGCCCAAGAGGCATACAAAGA
ACAACAAAACGCTAGACAAGAAGCCTTGCAGAAGCGGAAGGCAGAGAGGAAAAAGATGAT
GGAGGAGGCAGAGGCAAAGCTGAGCGCAGAAATAATCCGCAAGAAAGAGGCTAAGGATCG
TGCCCGTCAAGCGAAGAAGGCAATGCCAAGGGTGAGGATGACTCGTGCTCACTAGGATGC
TCTCAGTTTCTTTGCACACATTTTGTGAGAATTTGGTTTGGTTTTCCATGCCATCCACTG
AATAGAGACTTTTAGTGTCTGGTACCTACCCCTCACGGCCGGTATACTTAAAAAGGGGTG
TTTGGCATTAAGTTAGGTGTAGTTTGGGGGATTATTGCAATATTTTGGCTTTAGTGGGAA
AATTGGACGATGTACTGAAATTAAAATGGTGGTGGAGTAATAGGGTTTCTCTTGGCTGAC
ATTTTAACACCTAGGAGCAACTCTAATAATTTGAGGTTTCCCAGGGGTTATGTTGTTTAC
TTATTTTTTACCAAAAAAAGAAAAAAGAAAAAAAACTAATGTTTGGTTGCTTGATGTCCA
TTGGCATCTTGGACGTCCCTGTATTACTCTATTATTACGGTCTCTTATGATTAACCCTAA
TTTGGGACTACTTACAAC