Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0035g00560.t01
CDS Infomation

cds chromosome:12X:12:19929658:19932528:-1 gene:VIT_12s0035g00560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTTGCCTTCTCATTTCCTAGCAATTGCAGGGCTTATTCTGGGGTTGGTGTTTTGG
TATAATCACTGGAGAGGTAAGACTCTTACTCACAAGAGTAAGGGCATGGCCCCCCCCGGA
GCCCTCCGGTGCCTGGCCATTTATAGGTCACCTGCACCTACTACAAGGAAAGTCCCAGTT
TTCCGAACCCTTGGAGCCATGGGTGATAAGCTTGGTCCTGTGTTTGTGATCGGGCTTGGA
GTGTACCGAGCACTTGTGGTGAGTAATCATGAGGCTGTTAAAGAATGTTTCACTACCAAC
GACAAGGTTTTTGCCTCACGCCCAAGTCCTAGTGCAGCCAAGATCCTAGGGTACAACTAT
GCCGCATTCGGCTTTGCTCCTTATGGACCTTTTTGGCGTGAGATGCAGAAGCTATCACTG
CTGGAAATTCTCTCCACCCGTCGCCTCAGTGACTTGATGCATGTGCAGGTTTCGGAATTG
CAAGCTGTCATCAAAGATTTGTACATACTTGGCAAAGATAACAAATGGGTGAATTCAAAA
AGGGTGGTGATGAGTGAGTGGTTTGAACACCTGACCTTCAATGTAGTCCTGACGATGATT
GCGGGGAAGAGATATTTTAACGACGTTGTCCATGGGGGTGAGGAAGCAAGGTCTGCTATA
GCAGCAATTAAGAAATTCATGTCTCTATCTGGGGCCTTTGTGGCATCAGATGTGATCCCA
TTTCTTGAATGGGTGGATTTACAAGGCCATTTGTCCTCTATGAAACTTGTTGCAAAGGAA
TTGGACTCACTTATAGAAAGTTGGGTAGAAGAACATAGAGGGAGGCTCAACCGTGAGGCC
AGCAGTAGGCTGGACCTCATAGACGTCATGCTAACAATGCTCAAAGGCGCTTCCCTGTTT
CACTACTCACGCGAGACTATTATCAAGGCAACAGTAGTGAACATAATCGTGGGGGGCACT
GATACCACTTCTATTACCTCTACATGGCTCCTGTCTGCATTGTTGAACAATAGACATGTT
ATGAAGCATGCTCAGGAAGAGCTAGACTTAAAAGTTGGTAGAGACAGATGGGTGGAACAA
TCAGATATCCAGAACCTAGTTTACCTTAAGGCTATTGTTAAGGAAACCCTAAGGCTATAC
ACAACAGCTCCCCTATCAGTACCACACGAGGCAATGGAAGACTTCCATGTTGGTGGCTAT
CACATTCCCAAAGGCACCCGCTTGCTGGTCAATGCATGGAAGTTGCACCGAGATCCTGCT
GTTTGGTCTAACCCTGAAGAGTTTCAGCCAGAGAGGTTTTTGACAAGCCATGCAACTATA
GATGTTGTTGGCCAGCATTTTGAGTTAATCCCATTTGGTTCTGGCAGAAGATCTTGCCCA
GGAATCAATTTGGCCTTACAAATGTTACACCTGACAATTGCTCGGTTGCTTCAATGA

Peptide Sequence

PEP ID

VIT_12s0035g00560.t01
PEP Infomation

pep chromosome:12X:12:19929658:19932528:-1 gene:VIT_12s0035g00560 transcript:VIT_12s0035g00560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDLPSHFLAIAGLILGLVFWYNHWRGKTLTHKSKGMAPPGALRCLAIYRSPAPTTRKVPV
FRTLGAMGDKLGPVFVIGLGVYRALVVSNHEAVKECFTTNDKVFASRPSPSAAKILGYNY
AAFGFAPYGPFWREMQKLSLLEILSTRRLSDLMHVQVSELQAVIKDLYILGKDNKWVNSK
RVVMSEWFEHLTFNVVLTMIAGKRYFNDVVHGGEEARSAIAAIKKFMSLSGAFVASDVIP
FLEWVDLQGHLSSMKLVAKELDSLIESWVEEHRGRLNREASSRLDLIDVMLTMLKGASLF
HYSRETIIKATVVNIIVGGTDTTSITSTWLLSALLNNRHVMKHAQEELDLKVGRDRWVEQ
SDIQNLVYLKAIVKETLRLYTTAPLSVPHEAMEDFHVGGYHIPKGTRLLVNAWKLHRDPA
VWSNPEEFQPERFLTSHATIDVVGQHFELIPFGSGRRSCPGINLALQMLHLTIARLLQ

Transcript Sequence

Transcript ID

VIT_12s0035g00560.t01
Transcript Infomation

cdna chromosome:12X:12:19929658:19932528:-1 gene:VIT_12s0035g00560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTTGCCTTCTCATTTCCTAGCAATTGCAGGGCTTATTCTGGGGTTGGTGTTTTGG
TATAATCACTGGAGAGGTAAGACTCTTACTCACAAGAGTAAGGGCATGGCCCCCCCCGGA
GCCCTCCGGTGCCTGGCCATTTATAGGTCACCTGCACCTACTACAAGGAAAGTCCCAGTT
TTCCGAACCCTTGGAGCCATGGGTGATAAGCTTGGTCCTGTGTTTGTGATCGGGCTTGGA
GTGTACCGAGCACTTGTGGTGAGTAATCATGAGGCTGTTAAAGAATGTTTCACTACCAAC
GACAAGGTTTTTGCCTCACGCCCAAGTCCTAGTGCAGCCAAGATCCTAGGGTACAACTAT
GCCGCATTCGGCTTTGCTCCTTATGGACCTTTTTGGCGTGAGATGCAGAAGCTATCACTG
CTGGAAATTCTCTCCACCCGTCGCCTCAGTGACTTGATGCATGTGCAGGTTTCGGAATTG
CAAGCTGTCATCAAAGATTTGTACATACTTGGCAAAGATAACAAATGGGTGAATTCAAAA
AGGGTGGTGATGAGTGAGTGGTTTGAACACCTGACCTTCAATGTAGTCCTGACGATGATT
GCGGGGAAGAGATATTTTAACGACGTTGTCCATGGGGGTGAGGAAGCAAGGTCTGCTATA
GCAGCAATTAAGAAATTCATGTCTCTATCTGGGGCCTTTGTGGCATCAGATGTGATCCCA
TTTCTTGAATGGGTGGATTTACAAGGCCATTTGTCCTCTATGAAACTTGTTGCAAAGGAA
TTGGACTCACTTATAGAAAGTTGGGTAGAAGAACATAGAGGGAGGCTCAACCGTGAGGCC
AGCAGTAGGCTGGACCTCATAGACGTCATGCTAACAATGCTCAAAGGCGCTTCCCTGTTT
CACTACTCACGCGAGACTATTATCAAGGCAACAGTAGTGAACATAATCGTGGGGGGCACT
GATACCACTTCTATTACCTCTACATGGCTCCTGTCTGCATTGTTGAACAATAGACATGTT
ATGAAGCATGCTCAGGAAGAGCTAGACTTAAAAGTTGGTAGAGACAGATGGGTGGAACAA
TCAGATATCCAGAACCTAGTTTACCTTAAGGCTATTGTTAAGGAAACCCTAAGGCTATAC
ACAACAGCTCCCCTATCAGTACCACACGAGGCAATGGAAGACTTCCATGTTGGTGGCTAT
CACATTCCCAAAGGCACCCGCTTGCTGGTCAATGCATGGAAGTTGCACCGAGATCCTGCT
GTTTGGTCTAACCCTGAAGAGTTTCAGCCAGAGAGGTTTTTGACAAGCCATGCAACTATA
GATGTTGTTGGCCAGCATTTTGAGTTAATCCCATTTGGTTCTGGCAGAAGATCTTGCCCA
GGAATCAATTTGGCCTTACAAATGTTACACCTGACAATTGCTCGGTTGCTTCAATGATTT
GACATGGCTACACCATCAAATTCTCCAGTGGACATGACAGAAGGGATAAGTATCACCATG
CCTAAGGTCACTCCACTGGAAGTTATGCTTACCCC