Gene sequences

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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_12s0034g02380.t01
CDS Infomation	cds chromosome:12X:12:18842918:18856101:-1 gene:VIT_12s0034g02380 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine hydroxymethyltransferase [Source:UniProtKB/TrEMBL;Acc:F6H906]
Sequence	ATGGATTTGAACTCCAGCTCCAATCTCTCTCTTGGGTTCTCATCGTCTTCATCGGTGCAA ATAGCCGACGATTCTATCGCTTTTCAGATTGATTCCAGCTTCCGCGAATCCACGAACCCG ATGCCAACCGCGCCACTGCAGTTGTTGGAGGAGAATCACAGGGGCGAGAATGGTGGAGGC GGGGGAGAGAGCGCGGATGAGGAAGAGAAGGTGGAGGAGTTCAGGATATTGGGGCATTCG ATGTGCTTGAAGAGGCGGAGAGACGGGGAGGTCACTTGTTCGGCGGTGAGAAGAGATCCG ATGGAGGCGGAGCTCGAGGCGCGGCGGAGCGCTGTGAGGGCGTGGGGAAACCAGCGGCTC TGCGTGGCCGATCCTGATGTGTTTGATATTATGGAAAAAGAGAAGCGGAGGCAATTCAAG GGAATTGAGTTGATCGCTTCGGAGAATTTCGTGTGCAGGGCGGTGATGGAAGCCCTGGGA AGCCATTTGACGAATAAGTATTCCGAGGGAATGCCGGGTGCTAGGTATTACTGTGGGAAT CAGTATATTGATGAGATTGAATGGCTTTGTTGCAAGCGCGCATTGAAGGCATTCGATCTT GATCCGGAGAATTGGGGAGTGAATGTTCAGCCATATTCATGTACTTCTGCAAATTTCGCA GTTTACACAGGTTTACTTCTTCCGGGTGATAGAATCATGGGGTTGGATACTCCATCAGGT GGAAATACTAGTCATGGGTACTACACTCCTAATGGCAGGAAAGTTTCGGGGGCGTCTATC TTCTTTGAGAGTTTACCCTATAAGGTGAACCCACAAACTGGGTATATAGATTTTGATAAG CTGGAAGAGAGGGCGCTAGATTTTCGCCCCAAGATTCTTATTTGTGGTGGGAGTTCATAT CCTCGTGAATGGGATTATGCTAGGTTTAGACAGATTGCTGATAAGTGTGGAGCAGTGCTT TTGTGCGACATGGCTCAAATTAGCGGACTTGTTGCGGCTAAGGAATGTGTAAACCCTTTT GATTACTGTGATATTGTTACCTCAACAACTCACAAAAGTCTACGGGGTCCCAGGGGAGGC ATCATTTTTTATAGAAAGGGTACAAAGCCAAGGAAAAGAGGGATGATTCTAAGTCAAGGA GATGATAATGATCACTATGACTATGAGGAAAAGATAAACTTTGCTGTTTTCCCATCATTG CAAGGGGGCCCTCACAATAACCACATTGCTGCCCTTGCAATAGCCCTAAAACAAGTGGCT ACTCCAGAGTACAAGGCATATATGCTGCAGGTAAAGAAAAATGCTCAGGCTTTAGCATCT GCTTTACTGAGAAGAAAATGTAGGCTGGTAACTGGAGGCACAGACAACCATTTGTTACTT TGGGATCTTAGAACTCTGGGATTGACAGGTAAGAACTATGAGAAGGTCTGTGAAATGTGC CACATTACACTCAATAAAATTGCTATATTCGGTGATAATGGCACTATTACTCCTGGAGGT GTAAGGATTGGTACTCCTGCTATGACATCAAGAGGTTGTCTAGAGGCCGATTTTGAGACT ATTGCTGACTTTTTGCTCAGAGCTGCACAGATTGCAAGTGTCGTACAGAGAGAGCATGGG AAAATGCAGAAGGCTTTTCTGAAGGGCCTTGAGAGCAATAAAGATATTGTTGAGCTCAGA ACCCGAGTTGAAATTTTTGCTACTCAATTTGTAATGCCAGGATTTGATGGTTGA

Peptide Sequence

PEP ID	VIT_12s0034g02380.t01
PEP Infomation	pep chromosome:12X:12:18842918:18856101:-1 gene:VIT_12s0034g02380 transcript:VIT_12s0034g02380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine hydroxymethyltransferase [Source:UniProtKB/TrEMBL;Acc:F6H906]
Sequence	MDLNSSSNLSLGFSSSSSVQIADDSIAFQIDSSFRESTNPMPTAPLQLLEENHRGENGGG GGESADEEEKVEEFRILGHSMCLKRRRDGEVTCSAVRRDPMEAELEARRSAVRAWGNQRL CVADPDVFDIMEKEKRRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYCGN QYIDEIEWLCCKRALKAFDLDPENWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDTPSG GNTSHGYYTPNGRKVSGASIFFESLPYKVNPQTGYIDFDKLEERALDFRPKILICGGSSY PREWDYARFRQIADKCGAVLLCDMAQISGLVAAKECVNPFDYCDIVTSTTHKSLRGPRGG IIFYRKGTKPRKRGMILSQGDDNDHYDYEEKINFAVFPSLQGGPHNNHIAALAIALKQVA TPEYKAYMLQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLRTLGLTGKNYEKVCEMC HITLNKIAIFGDNGTITPGGVRIGTPAMTSRGCLEADFETIADFLLRAAQIASVVQREHG KMQKAFLKGLESNKDIVELRTRVEIFATQFVMPGFDG

Transcript Sequence

Transcript ID	VIT_12s0034g02380.t01
Transcript Infomation	cdna chromosome:12X:12:18842918:18856101:-1 gene:VIT_12s0034g02380 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine hydroxymethyltransferase [Source:UniProtKB/TrEMBL;Acc:F6H906]
Sequence	ATCCTACGCTTCCCTGTTACGTTTCTAGGGTTAGGGCTAGGATTTGGGTTGGGTTTTCTG AGAATTCCATGGAGGCTGCTTCGACCTCTAGAAGACCGCTCTTCCGCTACTGTTACTGTA ACTGCTTGAAGCGTTCTTGTCGTTGTTTCTGCTGTTGCTACTGTTGTTCACGCCCTTGAA CACATTCCCAACTAGGGTTAGGGCTAGGATTAGGGTTTTGCGTTTTATAATGGATTTGAA CTCCAGCTCCAATCTCTCTCTTGGGTTCTCATCGTCTTCATCGGTGCAAATAGCCGACGA TTCTATCGCTTTTCAGATTGATTCCAGCTTCCGCGAATCCACGAACCCGATGCCAACCGC GCCACTGCAGTTGTTGGAGGAGAATCACAGGGGCGAGAATGGTGGAGGCGGGGGAGAGAG CGCGGATGAGGAAGAGAAGGTGGAGGAGTTCAGGATATTGGGGCATTCGATGTGCTTGAA GAGGCGGAGAGACGGGGAGGTCACTTGTTCGGCGGTGAGAAGAGATCCGATGGAGGCGGA GCTCGAGGCGCGGCGGAGCGCTGTGAGGGCGTGGGGAAACCAGCGGCTCTGCGTGGCCGA TCCTGATGTGTTTGATATTATGGAAAAAGAGAAGCGGAGGCAATTCAAGGGAATTGAGTT GATCGCTTCGGAGAATTTCGTGTGCAGGGCGGTGATGGAAGCCCTGGGAAGCCATTTGAC GAATAAGTATTCCGAGGGAATGCCGGGTGCTAGGTATTACTGTGGGAATCAGTATATTGA TGAGATTGAATGGCTTTGTTGCAAGCGCGCATTGAAGGCATTCGATCTTGATCCGGAGAA TTGGGGAGTGAATGTTCAGCCATATTCATGTACTTCTGCAAATTTCGCAGTTTACACAGG TTTACTTCTTCCGGGTGATAGAATCATGGGGTTGGATACTCCATCAGGTGGAAATACTAG TCATGGGTACTACACTCCTAATGGCAGGAAAGTTTCGGGGGCGTCTATCTTCTTTGAGAG TTTACCCTATAAGGTGAACCCACAAACTGGGTATATAGATTTTGATAAGCTGGAAGAGAG GGCGCTAGATTTTCGCCCCAAGATTCTTATTTGTGGTGGGAGTTCATATCCTCGTGAATG GGATTATGCTAGGTTTAGACAGATTGCTGATAAGTGTGGAGCAGTGCTTTTGTGCGACAT GGCTCAAATTAGCGGACTTGTTGCGGCTAAGGAATGTGTAAACCCTTTTGATTACTGTGA TATTGTTACCTCAACAACTCACAAAAGTCTACGGGGTCCCAGGGGAGGCATCATTTTTTA TAGAAAGGGTACAAAGCCAAGGAAAAGAGGGATGATTCTAAGTCAAGGAGATGATAATGA TCACTATGACTATGAGGAAAAGATAAACTTTGCTGTTTTCCCATCATTGCAAGGGGGCCC TCACAATAACCACATTGCTGCCCTTGCAATAGCCCTAAAACAAGTGGCTACTCCAGAGTA CAAGGCATATATGCTGCAGGTAAAGAAAAATGCTCAGGCTTTAGCATCTGCTTTACTGAG AAGAAAATGTAGGCTGGTAACTGGAGGCACAGACAACCATTTGTTACTTTGGGATCTTAG AACTCTGGGATTGACAGGTAAGAACTATGAGAAGGTCTGTGAAATGTGCCACATTACACT CAATAAAATTGCTATATTCGGTGATAATGGCACTATTACTCCTGGAGGTGTAAGGATTGG TACTCCTGCTATGACATCAAGAGGTTGTCTAGAGGCCGATTTTGAGACTATTGCTGACTT TTTGCTCAGAGCTGCACAGATTGCAAGTGTCGTACAGAGAGAGCATGGGAAAATGCAGAA GGCTTTTCTGAAGGGCCTTGAGAGCAATAAAGATATTGTTGAGCTCAGAACCCGAGTTGA AATTTTTGCTACTCAATTTGTAATGCCAGGATTTGATGGTTGAAAATCTTTTTGAGATTG CATCCTGTTAAGGATTGCCATCTTCCATTCATGACAGTCTTCTGCTGCACATGGTAATAA ATCCAAGTTCAGTTCCTTATTTTAAGTGATGCTGCCATGTTGATGGGGGGCAAGCCATTT TGGTCATTCACTGATCCGCTTATATGGGCAAATGGCCTTGGTGACGGCGGACCAGCAATA CAAGGTGCCTTTCAGCCTCAAAACGGTTG