Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0034g02240.t01
CDS Infomation

cds chromosome:12X:12:18664082:18670677:1 gene:VIT_12s0034g02240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAGTTCCTCATCAGCTCTACAGTCTGTACTCAGCCTCCAACATGATCAAGAGGGAA
GATCATAGCCGGAAAAGTCTGAAAAAGCCAGAAGAAAAGCAGCATGATGACTCCAAACCT
TTCAACTCCCGGAATCTGTCAAAGGTCATTCTCCCTCCCTTAGGTGTCTCAAGTTATAAC
CAAAATCCGTTAGCGCCCAAAGGATGGATCATCTCACCAATGGATTCAAGATACAGGTGT
TGGGAGACATTTATGGTGGTTTTAGTAGCCTACTCTCTATGGATTTACCCTTTTCAAGTT
GCATTTCTGAAAGCCTCTCCAAATAGACAACTATATATCACGGATAATGTCGTTGATCTA
TTTTTCGCTGTTGACATCGTCTTAACATTTTTTGTCGCTTACATTGATCGAAGAACTCAG
CTACTTGTTTGTGACTGGAGAAAGATTGCAGTGAGGTACCTGTCAACATGGTTTCTGATG
GATATGGCATCAACTATGCCTTTTGAGGCACTGGGCTCCTTGATCACTGGCAAACAGAAA
GTGGGTCTCTCCTACTCCCTCTTGGGTCTGCTCAGATTCTGGCGTCTCCGCCGTGTCAAG
CAACTCTTCACCAGGCTTGAGAAGGACATCAGATTCAGCTATTTCTGGGTTCGATGTGCT
AGGCTATTATCAGTGACATTGTTTCTGGTCCACTGTGCTGGGTGCCTATACTACTTGCTA
GCTGATCGATACCCGCATCAAGGAAAGACGTGGATTGGAGCCGTTATACCGAATTTTAGA
GAGACAAGCCTTTGGATCAGATATATTTCAGCCCTGTATTGGTCCATCACCACCATGACC
ACTGTTGGCTATGGTGACATGCATGCTGTGAACACTATGGAGATGATCTTCATCATTTTC
TACATGCTATTCAACCTTGGCTTAACTGCTTACTTGATCGGTAACATGACAAACTTAGTT
GTTGAAGGCACTAGACGTACTATGGAATTTAGAAATAGCATAGAAGCAGCATCAAACTTT
GTATGCAGAAACCGGTTGCCTCCAAGATTGAAAGAGCAGATACTGGCTTATATGTGTTTG
AGATTTAAGGCTGAGAGCTTGAATCAGCACCAACTAATTGAACAGCTGCCCAAATCCATA
TGCAAAAGCATCTGCCAGCATTTATTCTTGCCAACTGTGGAGAAGGTCTATCTTTTCAAG
GGAATCTCAAGAGAAATACTCTTGCTCCTGGTTGCAAAGATGAAGGCTGAGTACATACCT
CCTAGAGAAGATGTTATAATGCAGAATGAGGCGCCAGATGACGTTTACATAATTGTATCT
GGAGAAGTTGAAATTATTGATTATGAGGGAGAGAAAGAGCATGTTGTTGGGACTCTACAG
TCTGCAGACATGTTTGGAGAAGTTGGGGCACTTTGCTGCAGACCTCAAACCTATACGTTC
CGAACCAAGACCCTTTCACAACTCCTGAGGCTGAAGACCAGTGCACTGATAGAAGCAATG
CAGACTAAGAAGGAAGACAATGTGATTATCCTTAAAAACTTTCTTCAGCATCACAAAAGG
CTTAAGGATCTAAACATTGGAGATTTGCTGGTGGAGAATGGGGAAGAAGATGTTAACCCC
AACATGGCTTTCAATTTACTGACTGTTGCCAGCACTGGCAACGCAGCCTTTCTTGATGAG
CTTCTCAAGGCAAAATTGGACCCTGATATTGGGGACTCCAAAGGAAGAACCCCATTGCAC
ATAGCAGCATCAAAAGGGCATGAAGATTGTGTAATGGTACTTCTCAAACATGCGTGCAAT
GTACATGTCCGAGATATAAATGGCAACACTGCATTATGGGATGCTGTATCTGCAAAACAC
AATTCTATATTCTGGATCCTATATCACTGTGCTTCCCTTTCAGATCCCTACACTTCTGGT
GATCTTTTGTGCACTGCTGCAAAGAGAAATGACCTAACAGCGATGAAGGAGCTCCTGAAA
CAAGGTTTAAACATAGACTCGAAGAATCGCCAAGGGTTAACAGCAATCCAGATTGCCATG
GCAGAAGACCACACAGATATGGTAAAGCTACTTGTAATGAATGGCGCAGATGTTATCCAT
GCCAATACCTATGAGTTCTCTTCAGAAACTCTGAATGAAATGCTGCAAAAGCGAGAGATG
GGACACCGAATTATGGTGCCTGATACCTTGCCTACTGATCATGAAACGTTGTTGAGGGAC
CAAGGAGGAGAAAAGGAGTTTAATACTAATGGAGGATTCAAAGGAACAAATGTTCCAAGG
GTGAGCATATATAGAGGCCATCCTCTGCAGAGAAAAGAGAGCTGCTGCACTGAAGCTGGC
CGGCTGATTAGGTTGCCAAACTCATTAATGGAGCTCAAGGCCATTGCAGGTGAGAAGCTT
GGATTTGATGCAAGAAATGCAATGGTAACGAACGAAGAAGGAGCAGAAATCGACTCCATT
GAAGTTATTAGAGACAATGATACGCTTTTCCTAGTTGAAGATCCAAACTCCCTGATGTAA

Peptide Sequence

PEP ID

VIT_12s0034g02240.t01
PEP Infomation

pep chromosome:12X:12:18664082:18670677:1 gene:VIT_12s0034g02240 transcript:VIT_12s0034g02240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKVPHQLYSLYSASNMIKREDHSRKSLKKPEEKQHDDSKPFNSRNLSKVILPPLGVSSYN
QNPLAPKGWIISPMDSRYRCWETFMVVLVAYSLWIYPFQVAFLKASPNRQLYITDNVVDL
FFAVDIVLTFFVAYIDRRTQLLVCDWRKIAVRYLSTWFLMDMASTMPFEALGSLITGKQK
VGLSYSLLGLLRFWRLRRVKQLFTRLEKDIRFSYFWVRCARLLSVTLFLVHCAGCLYYLL
ADRYPHQGKTWIGAVIPNFRETSLWIRYISALYWSITTMTTVGYGDMHAVNTMEMIFIIF
YMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVCRNRLPPRLKEQILAYMCL
RFKAESLNQHQLIEQLPKSICKSICQHLFLPTVEKVYLFKGISREILLLLVAKMKAEYIP
PREDVIMQNEAPDDVYIIVSGEVEIIDYEGEKEHVVGTLQSADMFGEVGALCCRPQTYTF
RTKTLSQLLRLKTSALIEAMQTKKEDNVIILKNFLQHHKRLKDLNIGDLLVENGEEDVNP
NMAFNLLTVASTGNAAFLDELLKAKLDPDIGDSKGRTPLHIAASKGHEDCVMVLLKHACN
VHVRDINGNTALWDAVSAKHNSIFWILYHCASLSDPYTSGDLLCTAAKRNDLTAMKELLK
QGLNIDSKNRQGLTAIQIAMAEDHTDMVKLLVMNGADVIHANTYEFSSETLNEMLQKREM
GHRIMVPDTLPTDHETLLRDQGGEKEFNTNGGFKGTNVPRVSIYRGHPLQRKESCCTEAG
RLIRLPNSLMELKAIAGEKLGFDARNAMVTNEEGAEIDSIEVIRDNDTLFLVEDPNSLM

Transcript Sequence

Transcript ID

VIT_12s0034g02240.t01
Transcript Infomation

cdna chromosome:12X:12:18664082:18670677:1 gene:VIT_12s0034g02240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAGTTCCTCATCAGCTCTACAGTCTGTACTCAGCCTCCAACATGATCAAGAGGGAA
GATCATAGCCGGAAAAGTCTGAAAAAGCCAGAAGAAAAGCAGCATGATGACTCCAAACCT
TTCAACTCCCGGAATCTGTCAAAGGTCATTCTCCCTCCCTTAGGTGTCTCAAGTTATAAC
CAAAATCCGTTAGCGCCCAAAGGATGGATCATCTCACCAATGGATTCAAGATACAGGTGT
TGGGAGACATTTATGGTGGTTTTAGTAGCCTACTCTCTATGGATTTACCCTTTTCAAGTT
GCATTTCTGAAAGCCTCTCCAAATAGACAACTATATATCACGGATAATGTCGTTGATCTA
TTTTTCGCTGTTGACATCGTCTTAACATTTTTTGTCGCTTACATTGATCGAAGAACTCAG
CTACTTGTTTGTGACTGGAGAAAGATTGCAGTGAGGTACCTGTCAACATGGTTTCTGATG
GATATGGCATCAACTATGCCTTTTGAGGCACTGGGCTCCTTGATCACTGGCAAACAGAAA
GTGGGTCTCTCCTACTCCCTCTTGGGTCTGCTCAGATTCTGGCGTCTCCGCCGTGTCAAG
CAACTCTTCACCAGGCTTGAGAAGGACATCAGATTCAGCTATTTCTGGGTTCGATGTGCT
AGGCTATTATCAGTGACATTGTTTCTGGTCCACTGTGCTGGGTGCCTATACTACTTGCTA
GCTGATCGATACCCGCATCAAGGAAAGACGTGGATTGGAGCCGTTATACCGAATTTTAGA
GAGACAAGCCTTTGGATCAGATATATTTCAGCCCTGTATTGGTCCATCACCACCATGACC
ACTGTTGGCTATGGTGACATGCATGCTGTGAACACTATGGAGATGATCTTCATCATTTTC
TACATGCTATTCAACCTTGGCTTAACTGCTTACTTGATCGGTAACATGACAAACTTAGTT
GTTGAAGGCACTAGACGTACTATGGAATTTAGAAATAGCATAGAAGCAGCATCAAACTTT
GTATGCAGAAACCGGTTGCCTCCAAGATTGAAAGAGCAGATACTGGCTTATATGTGTTTG
AGATTTAAGGCTGAGAGCTTGAATCAGCACCAACTAATTGAACAGCTGCCCAAATCCATA
TGCAAAAGCATCTGCCAGCATTTATTCTTGCCAACTGTGGAGAAGGTCTATCTTTTCAAG
GGAATCTCAAGAGAAATACTCTTGCTCCTGGTTGCAAAGATGAAGGCTGAGTACATACCT
CCTAGAGAAGATGTTATAATGCAGAATGAGGCGCCAGATGACGTTTACATAATTGTATCT
GGAGAAGTTGAAATTATTGATTATGAGGGAGAGAAAGAGCATGTTGTTGGGACTCTACAG
TCTGCAGACATGTTTGGAGAAGTTGGGGCACTTTGCTGCAGACCTCAAACCTATACGTTC
CGAACCAAGACCCTTTCACAACTCCTGAGGCTGAAGACCAGTGCACTGATAGAAGCAATG
CAGACTAAGAAGGAAGACAATGTGATTATCCTTAAAAACTTTCTTCAGCATCACAAAAGG
CTTAAGGATCTAAACATTGGAGATTTGCTGGTGGAGAATGGGGAAGAAGATGTTAACCCC
AACATGGCTTTCAATTTACTGACTGTTGCCAGCACTGGCAACGCAGCCTTTCTTGATGAG
CTTCTCAAGGCAAAATTGGACCCTGATATTGGGGACTCCAAAGGAAGAACCCCATTGCAC
ATAGCAGCATCAAAAGGGCATGAAGATTGTGTAATGGTACTTCTCAAACATGCGTGCAAT
GTACATGTCCGAGATATAAATGGCAACACTGCATTATGGGATGCTGTATCTGCAAAACAC
AATTCTATATTCTGGATCCTATATCACTGTGCTTCCCTTTCAGATCCCTACACTTCTGGT
GATCTTTTGTGCACTGCTGCAAAGAGAAATGACCTAACAGCGATGAAGGAGCTCCTGAAA
CAAGGTTTAAACATAGACTCGAAGAATCGCCAAGGGTTAACAGCAATCCAGATTGCCATG
GCAGAAGACCACACAGATATGGTAAAGCTACTTGTAATGAATGGCGCAGATGTTATCCAT
GCCAATACCTATGAGTTCTCTTCAGAAACTCTGAATGAAATGCTGCAAAAGCGAGAGATG
GGACACCGAATTATGGTGCCTGATACCTTGCCTACTGATCATGAAACGTTGTTGAGGGAC
CAAGGAGGAGAAAAGGAGTTTAATACTAATGGAGGATTCAAAGGAACAAATGTTCCAAGG
GTGAGCATATATAGAGGCCATCCTCTGCAGAGAAAAGAGAGCTGCTGCACTGAAGCTGGC
CGGCTGATTAGGTTGCCAAACTCATTAATGGAGCTCAAGGCCATTGCAGGTGAGAAGCTT
GGATTTGATGCAAGAAATGCAATGGTAACGAACGAAGAAGGAGCAGAAATCGACTCCATT
GAAGTTATTAGAGACAATGATACGCTTTTCCTAGTTGAAGATCCAAACTCCCTGATGTAA
ATCAGAACCTTCTATCTAATTGGGATAAAAAAATGACTCTCAATCTTGTCCCTCCTTTTT
TGATTCCAATGCTGCATGGGTTTTTTTATTTTCTCTAACAGAGGAAAAGTGTGGATTTG