Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0034g02170.t01
CDS Infomation

cds chromosome:12X:12:18494994:18500936:1 gene:VIT_12s0034g02170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAAGGCGAACCATCTATGTCTGGGGCTTGGCGATCTTGTGCTTTGTTGTTCTTATG
ATTGTCACTCCAGCCATTCCTCAGTCTGAAGCTTATCATGATTTCGCTGACCAACGTGAA
TTTTTCGGCATACCAAATACACTAAATGTGATTTCAAATTTTCCATTTCTTATTGTTGGT
CTCATCGGGCTTGTACTTTGCTATCATGGGAACTATTTTAAGTTAAGCTTGCAAGGTGAG
CTTTGGGGCTGGACATTTTTTTTCATTGGTGTGGCTGCTGTTGGAATTGGATCTTCTTAC
TATCATCTCAAACCAAATGATGCACGTCTTGTGTGGGATCGCTTGCCGATGACCATTGCG
TTCACATCAATTATTGCAATCTTTATCATTGAAAGAATTGATGAGAGAAAGGGAACATTG
TCCATTGTACCCCTACTTTTGGTGGGTGTAATTAGCATTTTGTATTGGAGGTTTTTTGAT
GACCTTCGCCCATATGCACTGGTCCAGTTTCTTCCTTGCATTGCCATTCCGTTAATGGCA
ATATTGCTGCCTCCAATGTACACGCATTCCACATTTTGGCTTTGGGCTGCAGGATTTTAC
CTTTTGGCCAAGGTGGAAGAAGCAGAGGATAAACCAATTTACAAATGGACTCATCATATT
GTTAGTGGGCACACACTTAAGCACTTGTGTGCTGCAATGGTTCCTGTTTTCTTGACGCTC
ATGTTGGCAAAGAGGAGTATTGAGACTGAGAGGCAAAGTTTGTTGAAGACATGGAAGATT
TCCTGGACCAAGGTCAAAGAAGACGAAGTAAAGGTAGAGACTTGTACATACTCAACTGTT
CCAATCGAGGAATCACCATAA

Peptide Sequence

PEP ID

VIT_12s0034g02170.t01
PEP Infomation

pep chromosome:12X:12:18494994:18500936:1 gene:VIT_12s0034g02170 transcript:VIT_12s0034g02170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRRRTIYVWGLAILCFVVLMIVTPAIPQSEAYHDFADQREFFGIPNTLNVISNFPFLIVG
LIGLVLCYHGNYFKLSLQGELWGWTFFFIGVAAVGIGSSYYHLKPNDARLVWDRLPMTIA
FTSIIAIFIIERIDERKGTLSIVPLLLVGVISILYWRFFDDLRPYALVQFLPCIAIPLMA
ILLPPMYTHSTFWLWAAGFYLLAKVEEAEDKPIYKWTHHIVSGHTLKHLCAAMVPVFLTL
MLAKRSIETERQSLLKTWKISWTKVKEDEVKVETCTYSTVPIEESP

Transcript Sequence

Transcript ID

VIT_12s0034g02170.t01
Transcript Infomation

cdna chromosome:12X:12:18494994:18500936:1 gene:VIT_12s0034g02170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGCTTCTTCGTCATCTTCGCCTGTCTTCTCCGCCGCTGTTCTCCGCTTTCCGCCCCCACC
TCCGCCTCGGATCAGAGCCATAATCAATAATAATTAATTTTACACATATGGGTATATTAA
ATTAAGAGTTTTTGACTTATCACAACTCAATCTAATAGGGTTTTAGTGGATGGATAGCCA
TATTCAATAATTTTACACATATGGGCAGTCATATGAGTTTTTTTTTTTTTTCCACTATTT
TGACTATCTCTTTTTCTATTTTTCTATTTGTTTTTGGATATACAGAGTGGATTGGACAAC
AAAAATTGGAGCATGGAGGAACAAACTCTTTTTGACTGATTCATATCACACTGGTCCATT
TGTAATTTTGTTGGCTTCAGGTTGACTAGGAAACCCAAAAACCAGAGATTTTTCTTCAAT
TTATAGGTTGATCCTCACTCTCTATCTCTAAAACGGTGTAACATTCAATTCAGCATTGAC
AATATTGTGAAGAGGAGATGAGAAGGCGAACCATCTATGTCTGGGGCTTGGCGATCTTGT
GCTTTGTTGTTCTTATGATTGTCACTCCAGCCATTCCTCAGTCTGAAGCTTATCATGATT
TCGCTGACCAACGTGAATTTTTCGGCATACCAAATACACTAAATGTGATTTCAAATTTTC
CATTTCTTATTGTTGGTCTCATCGGGCTTGTACTTTGCTATCATGGGAACTATTTTAAGT
TAAGCTTGCAAGGTGAGCTTTGGGGCTGGACATTTTTTTTCATTGGTGTGGCTGCTGTTG
GAATTGGATCTTCTTACTATCATCTCAAACCAAATGATGCACGTCTTGTGTGGGATCGCT
TGCCGATGACCATTGCGTTCACATCAATTATTGCAATCTTTATCATTGAAAGAATTGATG
AGAGAAAGGGAACATTGTCCATTGTACCCCTACTTTTGGTGGGTGTAATTAGCATTTTGT
ATTGGAGGTTTTTTGATGACCTTCGCCCATATGCACTGGTCCAGTTTCTTCCTTGCATTG
CCATTCCGTTAATGGCAATATTGCTGCCTCCAATGTACACGCATTCCACATTTTGGCTTT
GGGCTGCAGGATTTTACCTTTTGGCCAAGGTGGAAGAAGCAGAGGATAAACCAATTTACA
AATGGACTCATCATATTGTTAGTGGGCACACACTTAAGCACTTGTGTGCTGCAATGGTTC
CTGTTTTCTTGACGCTCATGTTGGCAAAGAGGAGTATTGAGACTGAGAGGCAAAGTTTGT
TGAAGACATGGAAGATTTCCTGGACCAAGGTCAAAGAAGACGAAGTAAAGGTAGAGACTT
GTACATACTCAACTGTTCCAATCGAGGAATCACCATAATGTTCAAAGCTCTGTATACTTT
GTGTTTGGACCTTGATACAACAAACCCTACTAACCAATATTCTGAAAAACATTGTGTCAA
TGTCAACGTAGATAAAATCTCTACATCTGCTGTGGGAATGTGTACAAACTGGGTCACTTT
CAGTTATACATGTATATAGTAACTTTCCATA