Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0034g01950.t01
CDS Infomation

cds chromosome:12X:12:18177853:18179555:1 gene:VIT_12s0034g01950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGTTGAACTTAGCACCAAAGTTTGCACAAAAGATCTTCGAAGGAGAAGGTGGAACA
TATTACCGTTGGTCAAGTGCTGAATATGAATTGCTCAAGGAAGCAAAGGTTGGTGGTGGA
AGGCTTGTTCTGCAGCCTCGTGGCTTCGCTCTCCCTCACTATGCTGACTCCAACAAAATT
GGTTATGTTCTTCAAGGCAGCTGTGGAGTAGTTGGAATCGTATCACCCAAAGCATCCCAA
GAGGTGGTGTTGAGGCTCAAGAAAGGAGATATAATACCAGTGCCCTCTGGAGCAGTTTCA
TGGTGGTACAATGATGGAGACTCAGAACTAATTATCGTATTCCTTGGTGAAACTTCCAAG
GCTTATGTTCCCGGAGAATTCACATACTTCCTACTAACCGGAACTCAAGGAATCCTTGGA
GGTTTTTCCACTGAATTTAACTCCAGAGCCTATGATATCAACAACGAAGAAGCCAAAAAG
CTTGCAAGAAGCCAATCTGGCGTCTTGATAATTAAGCTACCAGAGGGCCACAAAATGCCC
CACCCCTGCAAGAACAGTACTGATAAATTGGTGTTTAATATTGATGCTGCATTACCTGAT
ATCCATGTCCAAAATGCTGGATTGCTTACTGCATTGACAGCAAAGAAGTTTCCCTTCCTT
GGAGAAGTTGGGCTCAGCGCCACCCTTGTGAAGCTGGATGCCAATGCCATGTCCTCACCG
ATGTACGCTGCTGATTCGTCGGTTCAAGTAATTTATGTTGCAAAAGGGAGTGGAAGGATT
CAAGTTGTTGGTATCAATGGTGAACGTGCCTTGGACACGAAAGTGAAGGCTGGTCACTTG
CTTGTTGTGCCAAGGTTCTTTGTGGCTTCTGCCATTGCAGATGGTGAAGGACTGGAGTAC
TTCTCATTGATAACAGCTACAGAACCTGTATTTGGTGAATTTACTGGGAAAACATCAGTA
TGGGGAGCATTATCTCCACATGTTTTACAGGCCTCTCTCAATGTGGCTCCAGAGTTTGAG
CAGCTTTTCAGGGCAAAGATCAAAAAGAGCACCATTCTTGTTCCTCCACAGAACTAG

Peptide Sequence

PEP ID

VIT_12s0034g01950.t01
PEP Infomation

pep chromosome:12X:12:18177853:18179555:1 gene:VIT_12s0034g01950 transcript:VIT_12s0034g01950.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALNLAPKFAQKIFEGEGGTYYRWSSAEYELLKEAKVGGGRLVLQPRGFALPHYADSNKI
GYVLQGSCGVVGIVSPKASQEVVLRLKKGDIIPVPSGAVSWWYNDGDSELIIVFLGETSK
AYVPGEFTYFLLTGTQGILGGFSTEFNSRAYDINNEEAKKLARSQSGVLIIKLPEGHKMP
HPCKNSTDKLVFNIDAALPDIHVQNAGLLTALTAKKFPFLGEVGLSATLVKLDANAMSSP
MYAADSSVQVIYVAKGSGRIQVVGINGERALDTKVKAGHLLVVPRFFVASAIADGEGLEY
FSLITATEPVFGEFTGKTSVWGALSPHVLQASLNVAPEFEQLFRAKIKKSTILVPPQN

Transcript Sequence

Transcript ID

VIT_12s0034g01950.t01
Transcript Infomation

cdna chromosome:12X:12:18177853:18179555:1 gene:VIT_12s0034g01950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCAGTCGTTCATTTGCTTTCTTTCAAATATACAGACATAATCCATGGCGTTGAACTTAGC
ACCAAAGTTTGCACAAAAGATCTTCGAAGGAGAAGGTGGAACATATTACCGTTGGTCAAG
TGCTGAATATGAATTGCTCAAGGAAGCAAAGGTTGGTGGTGGAAGGCTTGTTCTGCAGCC
TCGTGGCTTCGCTCTCCCTCACTATGCTGACTCCAACAAAATTGGTTATGTTCTTCAAGG
CAGCTGTGGAGTAGTTGGAATCGTATCACCCAAAGCATCCCAAGAGGTGGTGTTGAGGCT
CAAGAAAGGAGATATAATACCAGTGCCCTCTGGAGCAGTTTCATGGTGGTACAATGATGG
AGACTCAGAACTAATTATCGTATTCCTTGGTGAAACTTCCAAGGCTTATGTTCCCGGAGA
ATTCACATACTTCCTACTAACCGGAACTCAAGGAATCCTTGGAGGTTTTTCCACTGAATT
TAACTCCAGAGCCTATGATATCAACAACGAAGAAGCCAAAAAGCTTGCAAGAAGCCAATC
TGGCGTCTTGATAATTAAGCTACCAGAGGGCCACAAAATGCCCCACCCCTGCAAGAACAG
TACTGATAAATTGGTGTTTAATATTGATGCTGCATTACCTGATATCCATGTCCAAAATGC
TGGATTGCTTACTGCATTGACAGCAAAGAAGTTTCCCTTCCTTGGAGAAGTTGGGCTCAG
CGCCACCCTTGTGAAGCTGGATGCCAATGCCATGTCCTCACCGATGTACGCTGCTGATTC
GTCGGTTCAAGTAATTTATGTTGCAAAAGGGAGTGGAAGGATTCAAGTTGTTGGTATCAA
TGGTGAACGTGCCTTGGACACGAAAGTGAAGGCTGGTCACTTGCTTGTTGTGCCAAGGTT
CTTTGTGGCTTCTGCCATTGCAGATGGTGAAGGACTGGAGTACTTCTCATTGATAACAGC
TACAGAACCTGTATTTGGTGAATTTACTGGGAAAACATCAGTATGGGGAGCATTATCTCC
ACATGTTTTACAGGCCTCTCTCAATGTGGCTCCAGAGTTTGAGCAGCTTTTCAGGGCAAA
GATCAAAAAGAGCACCATTCTTGTTCCTCCACAGAACTAG