Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0034g01870.t01
CDS Infomation

cds chromosome:12X:12:18100795:18103199:1 gene:VIT_12s0034g01870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGTTGAACTTAGCACCAAAGTTTGCACAAAAGATCTTCGAAGGAGAAGGTGGAACA
TATTACAGTTGGTCAAGTGCTGAATATGAATTGCTCAAGGAAGCAAAGGTTGGTGGTGGA
AGGCTTGTTCTGGGGCCTCGTGGCTTCGCTCTCCCTCACTATGCTGACTCCAACAAAATT
GGTTATGTTCTTCAAGGCAGCTGTGGAGTAGTTGGAATGGTATTCCCCGAAGCATCCGAA
GAGGTGGTGTTGAAACTCAAGGAAGGAGATATAATACCAGTGCCCTCTGGAGCAGTTTCA
TGGTGGTACAATGATGGAGACTCAGAACTAGTTATCGTATTCCTTGGTGAAACTTCCAAG
GCCTATGTTCCCGGGGAATTCACATACTTCCTATTAACTGGAACCCAAGGAATCCTTGGA
GGTTTTTCCACTGAATTTAACTCCAGAGCCTATAATATCAGCAACGAAGAAGCCGAAAAG
CTTGCCAAAAGCCAAACTGGTGTTTTGCTTATTAAGCTACCAGAGGGCCAAAAAATGCCC
CACCCCTGCAAGAACAGTACTGATAAATTGGTGTACAATATTGATGCTGCATTACCTGAT
ATCCACGTCCAAAATGCTGGGTTGCTTACTGCCTTGACAGCAAAGAAGTTTCCATTCCTT
GGAGAAGTTGGGCTCAGCGCCACCCTTGTGAAGCTGGATGCCAATGCCATGTCCTCACCG
GTATACGCGGCAGATTCGTCGGTTCAAGTAATTTATGTTGCAAAAGGGAGTGGAAGGATT
CAAGTTGTTGGCATCAATGGTGAACGTGCCTTGGACACGAAAGTGAAGGCTGGCCACTTG
TATGTTGTGCCAAGGTTCTTTGTGGCCTCTACCATTGCAGACGGTGAAGGAATGGAGTAC
TTCTCATTGATAACAGCTACACAACCTGTATTTGGCGAATTTACTGGGAAAACATCAGTA
TGGGGAGCATTATCTCCACAAGTTTTACAGGCCTCGCTCAATGTGGCTCCAGAGTTTGAG
CAGCTTTTCAGGGCGAAGATAAAAAAGAGCACCATTCTTGTTCCTCCACAGAACTAG

Peptide Sequence

PEP ID

VIT_12s0034g01870.t01
PEP Infomation

pep chromosome:12X:12:18100795:18103199:1 gene:VIT_12s0034g01870 transcript:VIT_12s0034g01870.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MELNLAPKFAQKIFEGEGGTYYSWSSAEYELLKEAKVGGGRLVLGPRGFALPHYADSNKI
GYVLQGSCGVVGMVFPEASEEVVLKLKEGDIIPVPSGAVSWWYNDGDSELVIVFLGETSK
AYVPGEFTYFLLTGTQGILGGFSTEFNSRAYNISNEEAEKLAKSQTGVLLIKLPEGQKMP
HPCKNSTDKLVYNIDAALPDIHVQNAGLLTALTAKKFPFLGEVGLSATLVKLDANAMSSP
VYAADSSVQVIYVAKGSGRIQVVGINGERALDTKVKAGHLYVVPRFFVASTIADGEGMEY
FSLITATQPVFGEFTGKTSVWGALSPQVLQASLNVAPEFEQLFRAKIKKSTILVPPQN

Transcript Sequence

Transcript ID

VIT_12s0034g01870.t01
Transcript Infomation

cdna chromosome:12X:12:18100795:18103199:1 gene:VIT_12s0034g01870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATCTCTCAAAAGTCTCCCTTCATCTCTTCCATAACATTCAACTTAGTCCCTTTCTATTGT
TTCTCATAGAATCAAGGCAGTCGTTCATTTGCTTTCTTTCAAATATACAGATATAATCCA
TGGAGTTGAACTTAGCACCAAAGTTTGCACAAAAGATCTTCGAAGGAGAAGGTGGAACAT
ATTACAGTTGGTCAAGTGCTGAATATGAATTGCTCAAGGAAGCAAAGGTTGGTGGTGGAA
GGCTTGTTCTGGGGCCTCGTGGCTTCGCTCTCCCTCACTATGCTGACTCCAACAAAATTG
GTTATGTTCTTCAAGGCAGCTGTGGAGTAGTTGGAATGGTATTCCCCGAAGCATCCGAAG
AGGTGGTGTTGAAACTCAAGGAAGGAGATATAATACCAGTGCCCTCTGGAGCAGTTTCAT
GGTGGTACAATGATGGAGACTCAGAACTAGTTATCGTATTCCTTGGTGAAACTTCCAAGG
CCTATGTTCCCGGGGAATTCACATACTTCCTATTAACTGGAACCCAAGGAATCCTTGGAG
GTTTTTCCACTGAATTTAACTCCAGAGCCTATAATATCAGCAACGAAGAAGCCGAAAAGC
TTGCCAAAAGCCAAACTGGTGTTTTGCTTATTAAGCTACCAGAGGGCCAAAAAATGCCCC
ACCCCTGCAAGAACAGTACTGATAAATTGGTGTACAATATTGATGCTGCATTACCTGATA
TCCACGTCCAAAATGCTGGGTTGCTTACTGCCTTGACAGCAAAGAAGTTTCCATTCCTTG
GAGAAGTTGGGCTCAGCGCCACCCTTGTGAAGCTGGATGCCAATGCCATGTCCTCACCGG
TATACGCGGCAGATTCGTCGGTTCAAGTAATTTATGTTGCAAAAGGGAGTGGAAGGATTC
AAGTTGTTGGCATCAATGGTGAACGTGCCTTGGACACGAAAGTGAAGGCTGGCCACTTGT
ATGTTGTGCCAAGGTTCTTTGTGGCCTCTACCATTGCAGACGGTGAAGGAATGGAGTACT
TCTCATTGATAACAGCTACACAACCTGTATTTGGCGAATTTACTGGGAAAACATCAGTAT
GGGGAGCATTATCTCCACAAGTTTTACAGGCCTCGCTCAATGTGGCTCCAGAGTTTGAGC
AGCTTTTCAGGGCGAAGATAAAAAAGAGCACCATTCTTGTTCCTCCACAGAACTAGATTG
ATTAATAACCAAAGGCCCTCATGATGTATCATCATTTGTTTTCAGGAGTTACAGGGCTAT
CAAAATACAATAATTGTACTCCTAAGTATTTCTTTTATATGTGTATCCGTGAGATGGAAA
ATGTTGTACAACTATTAATTATATGGCAATAAATTAGGTTATGAACCTTAGTGTACTCAT
TCTGAGTGCAT