Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0034g01820.t01
CDS Infomation

cds chromosome:12X:12:18030513:18043335:1 gene:VIT_12s0034g01820 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGATTTCTGTATTGGGTGGTGGGTTTAAGCAAGTCATCACCCGCCTGTCACCCTTG
CCTTCCCTTTCCTCTCCTGCTTCTCCACTGCCCTCCACTACCAGAGCGAAGAGCTCTCAC
CTCACCTCTGCAACTCCTCCTCTCCACAAGGAGTCGCAAATTGAACCAACCCATGTTTCT
GTGACACCAAGAAAAAGGTGTCATTCGGTTGGCTACAAAGCGCGTCAATCTGCCATTCTT
GAAGTGCAGCAGTCATCTGATTTGGGTTCAGCTCTTGCAAGGTTAGGAGACATGTTGAAG
GTGCAAGACTTGAATGTCATTTTGCGTCATTTTGGGAAGCTATGCAGGTGGCAGGATCTC
TCTCAGCTCTTTGATTGGATGCAGAAGCATGAAAAGATCACCTTTTCATCTTATAGCACT
TACATAAAGTTCATGGGAAAGAGCCTCAATCCCATAAAGGCACTAGAAATATATAATAGC
ATACAAGATGAATCAGTCAGAAATAATGTCTCCGTCTGTAATTCTGTTCTTAGTTGTCTG
ATCAGGAATGGGAAGTTTGAGAACAGCCTTAAATTGTTTCATCAGATGAAGCAGGATGGT
CTAAGACCGGATGCTGTCACATATAGTACGCTACTTGCAGGCTGTATGAAAGTCAAACAT
GGCTACTCTAAGGCATTAGAGCTAGTTCAGGAGATGGAACGTAGCAGACTGCCCATGGAC
AGTGTAATTTATGGAACACTTCTGGCTGTGTGTGCATCAAACAATCGTTGCAAGGAAGCA
GAGAACTATTTTAACCAGATGAAGGATGAAGGTCATTTGCCTAATGTTTTCCATTATAGC
TCTTTGCTCAATGCTTATTCAGCAGATGGAGACTATAAAAAGGCTGACATGTTGGTTCAA
GACATGAAATCTGCAGGGTTAGTACCGAATAAGGTTATTTTAACAACTTTATTAAAGGTA
TATGTTAGAGGAGGCTTATTCGAAAAATCAAGAGAATTATTAGCTGAACTGGAAGATTTG
GGCTATGCAGAAGATGAGATGCCTTACTGTTTATTGATGGATGGCCTTGCGAAGTCTAGG
CGTATACTCGAAGCTAAATCAATTTTTGAAGAAATGAAGAAAAAACAAGTGAAATCTGAT
GGCTATTGCTACAGTATCATGATTTCAGCATTTTGCCGAAGTGGGCTGTTGAAAGAGGCA
AAGCAGTTGGCTAGGGATTTCGAAGCCACGTATGACAAATATGACTTGGTTATGTTAAAC
ACAATGCTCTGTGCTTACTGCAGAGCAGGTGAAATGGAGAGTGTGATGCAAATGATGAGG
AAAATGGATGAGTTAGCGATTAGTCCTGATTGGAACACCTTTCATATTTTAATCAAGTAT
TTTTGCAAAGAGAAATTGTATCTGCTTGCATATCGGACCATGGAAGACATGCACAACAAA
GGCCACCAACCAGAGGAGGAACTTTGTTCCTCCTTAATTTCTCATCTTGGTAAAATACGC
GCGCATTCACAAGCATTTTCTGTTTACAATATGTTGAGATATAGCAAGAGAACAATGTGT
AAGGCTCTTCATGAGAAGATTCTACATATTCTAGTAGCTGGACGGCTTTTAAAAGATGCA
TATGTAGTGGTCAAGGACAATGAAGGCTTGATCTCTAAACCTTCTATAAAGAAGTTTGCG
ACTGCATTTATGAAGTTTGGTAATGTAAACTTGATAAATGATGTTATGAAGGCTATCCAC
GGTTCTGGCTACAAGATTGATCAGGAACTATTTCAGATGGCTGTAACACGTTACATTGCG
GAACCTGAAAAGAAGGAACTGCTTCTCCATTTGCTACAATGGATGCCTGGTCAAGGTTAT
GTTGTTGATTCATCAACAAGAAATATGATTCTCAAGAACTCACACCTATTTGGCCGGCAA
CTCATTGCTGAGATGTTATCCAAACAGCATGCAAGGGCAAAAGCATTGATATCTAATTAG

Peptide Sequence

PEP ID

VIT_12s0034g01820.t01
PEP Infomation

pep chromosome:12X:12:18030513:18043335:1 gene:VIT_12s0034g01820 transcript:VIT_12s0034g01820.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEISVLGGGFKQVITRLSPLPSLSSPASPLPSTTRAKSSHLTSATPPLHKESQIEPTHVS
VTPRKRCHSVGYKARQSAILEVQQSSDLGSALARLGDMLKVQDLNVILRHFGKLCRWQDL
SQLFDWMQKHEKITFSSYSTYIKFMGKSLNPIKALEIYNSIQDESVRNNVSVCNSVLSCL
IRNGKFENSLKLFHQMKQDGLRPDAVTYSTLLAGCMKVKHGYSKALELVQEMERSRLPMD
SVIYGTLLAVCASNNRCKEAENYFNQMKDEGHLPNVFHYSSLLNAYSADGDYKKADMLVQ
DMKSAGLVPNKVILTTLLKVYVRGGLFEKSRELLAELEDLGYAEDEMPYCLLMDGLAKSR
RILEAKSIFEEMKKKQVKSDGYCYSIMISAFCRSGLLKEAKQLARDFEATYDKYDLVMLN
TMLCAYCRAGEMESVMQMMRKMDELAISPDWNTFHILIKYFCKEKLYLLAYRTMEDMHNK
GHQPEEELCSSLISHLGKIRAHSQAFSVYNMLRYSKRTMCKALHEKILHILVAGRLLKDA
YVVVKDNEGLISKPSIKKFATAFMKFGNVNLINDVMKAIHGSGYKIDQELFQMAVTRYIA
EPEKKELLLHLLQWMPGQGYVVDSSTRNMILKNSHLFGRQLIAEMLSKQHARAKALISN

Transcript Sequence

Transcript ID

VIT_12s0034g01820.t01
Transcript Infomation

cdna chromosome:12X:12:18030513:18043335:1 gene:VIT_12s0034g01820 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGATTTCTGTATTGGGTGGTGGGTTTAAGCAAGTCATCACCCGCCTGTCACCCTTG
CCTTCCCTTTCCTCTCCTGCTTCTCCACTGCCCTCCACTACCAGAGCGAAGAGCTCTCAC
CTCACCTCTGCAACTCCTCCTCTCCACAAGGAGTCGCAAATTGAACCAACCCATGTTTCT
GTGACACCAAGAAAAAGGTGTCATTCGGTTGGCTACAAAGCGCGTCAATCTGCCATTCTT
GAAGTGCAGCAGTCATCTGATTTGGGTTCAGCTCTTGCAAGGTTAGGAGACATGTTGAAG
GTGCAAGACTTGAATGTCATTTTGCGTCATTTTGGGAAGCTATGCAGGTGGCAGGATCTC
TCTCAGCTCTTTGATTGGATGCAGAAGCATGAAAAGATCACCTTTTCATCTTATAGCACT
TACATAAAGTTCATGGGAAAGAGCCTCAATCCCATAAAGGCACTAGAAATATATAATAGC
ATACAAGATGAATCAGTCAGAAATAATGTCTCCGTCTGTAATTCTGTTCTTAGTTGTCTG
ATCAGGAATGGGAAGTTTGAGAACAGCCTTAAATTGTTTCATCAGATGAAGCAGGATGGT
CTAAGACCGGATGCTGTCACATATAGTACGCTACTTGCAGGCTGTATGAAAGTCAAACAT
GGCTACTCTAAGGCATTAGAGCTAGTTCAGGAGATGGAACGTAGCAGACTGCCCATGGAC
AGTGTAATTTATGGAACACTTCTGGCTGTGTGTGCATCAAACAATCGTTGCAAGGAAGCA
GAGAACTATTTTAACCAGATGAAGGATGAAGGTCATTTGCCTAATGTTTTCCATTATAGC
TCTTTGCTCAATGCTTATTCAGCAGATGGAGACTATAAAAAGGCTGACATGTTGGTTCAA
GACATGAAATCTGCAGGGTTAGTACCGAATAAGGTTATTTTAACAACTTTATTAAAGGTA
TATGTTAGAGGAGGCTTATTCGAAAAATCAAGAGAATTATTAGCTGAACTGGAAGATTTG
GGCTATGCAGAAGATGAGATGCCTTACTGTTTATTGATGGATGGCCTTGCGAAGTCTAGG
CGTATACTCGAAGCTAAATCAATTTTTGAAGAAATGAAGAAAAAACAAGTGAAATCTGAT
GGCTATTGCTACAGTATCATGATTTCAGCATTTTGCCGAAGTGGGCTGTTGAAAGAGGCA
AAGCAGTTGGCTAGGGATTTCGAAGCCACGTATGACAAATATGACTTGGTTATGTTAAAC
ACAATGCTCTGTGCTTACTGCAGAGCAGGTGAAATGGAGAGTGTGATGCAAATGATGAGG
AAAATGGATGAGTTAGCGATTAGTCCTGATTGGAACACCTTTCATATTTTAATCAAGTAT
TTTTGCAAAGAGAAATTGTATCTGCTTGCATATCGGACCATGGAAGACATGCACAACAAA
GGCCACCAACCAGAGGAGGAACTTTGTTCCTCCTTAATTTCTCATCTTGGTAAAATACGC
GCGCATTCACAAGCATTTTCTGTTTACAATATGTTGAGATATAGCAAGAGAACAATGTGT
AAGGCTCTTCATGAGAAGATTCTACATATTCTAGTAGCTGGACGGCTTTTAAAAGATGCA
TATGTAGTGGTCAAGGACAATGAAGGCTTGATCTCTAAACCTTCTATAAAGAAGTTTGCG
ACTGCATTTATGAAGTTTGGTAATGTAAACTTGATAAATGATGTTATGAAGGCTATCCAC
GGTTCTGGCTACAAGATTGATCAGGAACTATTTCAGATGGCTGTAACACGTTACATTGCG
GAACCTGAAAAGAAGGAACTGCTTCTCCATTTGCTACAATGGATGCCTGGTCAAGGTTAT
GTTGTTGATTCATCAACAAGAAATATGATTCTCAAGAACTCACACCTATTTGGCCGGCAA
CTCATTGCTGAGATGTTATCCAAACAGCATGCAAGGGCAAAAGCATTGATATCTAATTAG