Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0034g01220.t01
CDS Infomation

cds chromosome:12X:12:17174161:17211596:1 gene:VIT_12s0034g01220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCATTCAAAATTCTCAATCACCCATCTAAACCCATCAAAAACCGGGCTGTTTCCTCTC
TTCCCTCATCGGGATTTCTGCAAGGTGGGATTCTCTGCAAGACCCAAACTCCGGTTCAAG
CTCGTTGTCCAGTCTATGGGTGATAGGTGGAGATTAAGCGACATTGATACCCATGCTGTG
CAAGAACAATTGAATATGTGGCTTGTGAAGACTCAAAGCTTTTTGAATGAAGTGACTTCT
CCATTGGTAAGAACTGGTCATGGTAGAAAGCCTGACTCTGCAAATGTGTCTGACACTCAA
GATATGGATGATGTATTTGTGCCAGAACAAACTATTCAGAGCAGCACACCCAGTGGCGAC
CTTTCATTGGCTGCTATTGTTTCTATTGAGCAATTCAGCAGGATGAACGGATTGACTGGG
GAAAAAATGCAGAAAATATTTAGAGCACTTGTTCCTGAAACTGTCTATAACGATGCCCGT
AATTTGGTGGAATATTGCTGCTTTAGGTTCTTGTCAAGAGATAGTTCTGATATTCATCCT
TGCCTCAAGGAACCTGCATTCCAGAGACTGATTTTCATTACAATGCTCGCATGGGAGAAT
CCTTACTATGAAGCAAATGATTCAAATGCTATTGGTTTAGAGAAAGCTTCCTTTAAGAGG
AAGCTTGTAGGAGAAGAGGCTTTTGTTCGTATTGCTCCTGCTGTTTCTGGTGTTGCCGAT
CGGCCAACTGCACATAATCTATTCAAGGCTCTTGCTGGTGATGAACGGGGCATATCTTTA
AGTTTGTGGTGTACATATGTTAATGAACTTCTCAAAGTGCACGAAGGACGCAAATCATAT
GAGATTCAAGAATCCCCCCAGCTTTCCAGGGAGCGGATCATATGTATTGGTTCTAGCAGG
AAGCGCCCGGTCATAAAGTGGGAGAACAATGTTGCATGGCCAGGAAAACTTATTTTGACC
AATAAAGCACTCTATTTTGAGGCTGTTGGATTAGTAGGGCAGCAAGATACTAGAAGATTG
GATCTTACAAGAAATGGTTTACAAGTGCAGAAAACAAAAGTTGGACCTTTTGGATCCCTT
CTTTTTGACTCTGCCGTTTCTGTTTCCTCTGGTCCTGGGTCCGAAACATGGGTGCTGGAA
TTTGTGGACTTAGGAGGTGAAATGAGACGAGATGTCTGGTATGCATTTATTAATGAAGTT
ATTGCTTTATACAAGTTCATAAATGAGTATGGAGCAGAGGATGGTGATCAATCTGTATTT
CATGTGTATGGTGCTCACAAAGGGAAGGAAAGGGCTATCACCGGTGCAATGAACAGTATT
GCTAGACTTCAGGCCCTTCAATTTATCCGGAAGTTGTTGGATGATCCAATTAAACTTGTT
CAGTTCTCATATTTGCAAAATGCACCCTATGGAGACATTGTGTTGCAAACTCTAGCTGTT
AATTATTGGGGTGGACAGTTAGTCACAAAATTTAAGGAGGCAGGCTATCTACCAGATCGA
GGATCAAGGTCTTCTGATGATGTGTTTGAAAGTAGTAACCATGTATTTGACATAGATGGA
AGTGTCTACTTCAGGAAGTGGATGAGATCTGCATCTTGGGTTTCTAGTTCCTCTATAGCT
TTCTGGAAGAATGCGTCAATAAAACAAGGGGTTGTATTAAGTAAAAATCTTGTCGTGGCT
GATACTACTCTTGTAGAAAGGGCAGCGGTAACATGCAAACATAAATACCAAGTGGTTGAG
AAAACACAAGCCACAATTGATGCAGCAATGCTTAAAGGGATACCCAGCAACATTGACCTT
TTCAAGGAACTTATACTTCCTTTGACTGTCACTGCCAAGAATTTTGAAAAACTTAGGCGC
TGGGAGGAGCCGCACTTGACCGTCTCCTTTCTTGCATTTGCATATACACTTATTGTCAGA
AACTTGCTGCCATATGTATTTCCCATGACATTGATGATCGTGGCATTTGGCATGTTGTTA
CTAAAGGGCCTCAAGGAGCAAGGTCGTCTGGGAAGATCTTTTGGAAAAGTTACTATACGT
GATCAGCCACCTTCAAATACAATTCAAAAGATCATAGCTGTAAAAGAAGCCATGCGTGAT
GTTGAAAACTATCTACAGAATCTGAATGTTACACTTCTAAAAATACGTACAATTATTCTT
TCAGGTCAGCCCCAGGTAACAACAGAGGTTGCCTTGGTGCTGTTAGGTTCTGCAACCATT
CTCCTTGTCATTCCTTTTAACTATGTTCTTGGTTTTGTTATCCTTGATCTTTTCACACGA
GAGCTTGAGTTTCGTAGAGAAATGGCTATGAGGTTCATCAGATTTTTGAAGGAGCGTTGG
GATACTGTGCCTGCAGCGCCGGTTGCTGTAATACCGTTTGAGAGTGATGACTCTTGGTCA
GTGGATCAAAGGAAAGAAATTAATAACAAAAAATCAGAAAGAACTCAAAACAATATTAAG
TCTAGATAA

Peptide Sequence

PEP ID

VIT_12s0034g01220.t01
PEP Infomation

pep chromosome:12X:12:17174161:17211596:1 gene:VIT_12s0034g01220 transcript:VIT_12s0034g01220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MHSKFSITHLNPSKTGLFPLFPHRDFCKVGFSARPKLRFKLVVQSMGDRWRLSDIDTHAV
QEQLNMWLVKTQSFLNEVTSPLVRTGHGRKPDSANVSDTQDMDDVFVPEQTIQSSTPSGD
LSLAAIVSIEQFSRMNGLTGEKMQKIFRALVPETVYNDARNLVEYCCFRFLSRDSSDIHP
CLKEPAFQRLIFITMLAWENPYYEANDSNAIGLEKASFKRKLVGEEAFVRIAPAVSGVAD
RPTAHNLFKALAGDERGISLSLWCTYVNELLKVHEGRKSYEIQESPQLSRERIICIGSSR
KRPVIKWENNVAWPGKLILTNKALYFEAVGLVGQQDTRRLDLTRNGLQVQKTKVGPFGSL
LFDSAVSVSSGPGSETWVLEFVDLGGEMRRDVWYAFINEVIALYKFINEYGAEDGDQSVF
HVYGAHKGKERAITGAMNSIARLQALQFIRKLLDDPIKLVQFSYLQNAPYGDIVLQTLAV
NYWGGQLVTKFKEAGYLPDRGSRSSDDVFESSNHVFDIDGSVYFRKWMRSASWVSSSSIA
FWKNASIKQGVVLSKNLVVADTTLVERAAVTCKHKYQVVEKTQATIDAAMLKGIPSNIDL
FKELILPLTVTAKNFEKLRRWEEPHLTVSFLAFAYTLIVRNLLPYVFPMTLMIVAFGMLL
LKGLKEQGRLGRSFGKVTIRDQPPSNTIQKIIAVKEAMRDVENYLQNLNVTLLKIRTIIL
SGQPQVTTEVALVLLGSATILLVIPFNYVLGFVILDLFTRELEFRREMAMRFIRFLKERW
DTVPAAPVAVIPFESDDSWSVDQRKEINNKKSERTQNNIKSR

Transcript Sequence

Transcript ID

VIT_12s0034g01220.t01
Transcript Infomation

cdna chromosome:12X:12:17174161:17211596:1 gene:VIT_12s0034g01220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAAAAATTGTAAAAGACTCAGAAAAAAAGATGCATTCAAAATTCTCAATCACCCATCTA
AACCCATCAAAAACCGGGCTGTTTCCTCTCTTCCCTCATCGGGATTTCTGCAAGGTGGGA
TTCTCTGCAAGACCCAAACTCCGGTTCAAGCTCGTTGTCCAGTCTATGGGTGATAGGTGG
AGATTAAGCGACATTGATACCCATGCTGTGCAAGAACAATTGAATATGTGGCTTGTGAAG
ACTCAAAGCTTTTTGAATGAAGTGACTTCTCCATTGGTAAGAACTGGTCATGGTAGAAAG
CCTGACTCTGCAAATGTGTCTGACACTCAAGATATGGATGATGTATTTGTGCCAGAACAA
ACTATTCAGAGCAGCACACCCAGTGGCGACCTTTCATTGGCTGCTATTGTTTCTATTGAG
CAATTCAGCAGGATGAACGGATTGACTGGGGAAAAAATGCAGAAAATATTTAGAGCACTT
GTTCCTGAAACTGTCTATAACGATGCCCGTAATTTGGTGGAATATTGCTGCTTTAGGTTC
TTGTCAAGAGATAGTTCTGATATTCATCCTTGCCTCAAGGAACCTGCATTCCAGAGACTG
ATTTTCATTACAATGCTCGCATGGGAGAATCCTTACTATGAAGCAAATGATTCAAATGCT
ATTGGTTTAGAGAAAGCTTCCTTTAAGAGGAAGCTTGTAGGAGAAGAGGCTTTTGTTCGT
ATTGCTCCTGCTGTTTCTGGTGTTGCCGATCGGCCAACTGCACATAATCTATTCAAGGCT
CTTGCTGGTGATGAACGGGGCATATCTTTAAGTTTGTGGTGTACATATGTTAATGAACTT
CTCAAAGTGCACGAAGGACGCAAATCATATGAGATTCAAGAATCCCCCCAGCTTTCCAGG
GAGCGGATCATATGTATTGGTTCTAGCAGGAAGCGCCCGGTCATAAAGTGGGAGAACAAT
GTTGCATGGCCAGGAAAACTTATTTTGACCAATAAAGCACTCTATTTTGAGGCTGTTGGA
TTAGTAGGGCAGCAAGATACTAGAAGATTGGATCTTACAAGAAATGGTTTACAAGTGCAG
AAAACAAAAGTTGGACCTTTTGGATCCCTTCTTTTTGACTCTGCCGTTTCTGTTTCCTCT
GGTCCTGGGTCCGAAACATGGGTGCTGGAATTTGTGGACTTAGGAGGTGAAATGAGACGA
GATGTCTGGTATGCATTTATTAATGAAGTTATTGCTTTATACAAGTTCATAAATGAGTAT
GGAGCAGAGGATGGTGATCAATCTGTATTTCATGTGTATGGTGCTCACAAAGGGAAGGAA
AGGGCTATCACCGGTGCAATGAACAGTATTGCTAGACTTCAGGCCCTTCAATTTATCCGG
AAGTTGTTGGATGATCCAATTAAACTTGTTCAGTTCTCATATTTGCAAAATGCACCCTAT
GGAGACATTGTGTTGCAAACTCTAGCTGTTAATTATTGGGGTGGACAGTTAGTCACAAAA
TTTAAGGAGGCAGGCTATCTACCAGATCGAGGATCAAGGTCTTCTGATGATGTGTTTGAA
AGTAGTAACCATGTATTTGACATAGATGGAAGTGTCTACTTCAGGAAGTGGATGAGATCT
GCATCTTGGGTTTCTAGTTCCTCTATAGCTTTCTGGAAGAATGCGTCAATAAAACAAGGG
GTTGTATTAAGTAAAAATCTTGTCGTGGCTGATACTACTCTTGTAGAAAGGGCAGCGGTA
ACATGCAAACATAAATACCAAGTGGTTGAGAAAACACAAGCCACAATTGATGCAGCAATG
CTTAAAGGGATACCCAGCAACATTGACCTTTTCAAGGAACTTATACTTCCTTTGACTGTC
ACTGCCAAGAATTTTGAAAAACTTAGGCGCTGGGAGGAGCCGCACTTGACCGTCTCCTTT
CTTGCATTTGCATATACACTTATTGTCAGAAACTTGCTGCCATATGTATTTCCCATGACA
TTGATGATCGTGGCATTTGGCATGTTGTTACTAAAGGGCCTCAAGGAGCAAGGTCGTCTG
GGAAGATCTTTTGGAAAAGTTACTATACGTGATCAGCCACCTTCAAATACAATTCAAAAG
ATCATAGCTGTAAAAGAAGCCATGCGTGATGTTGAAAACTATCTACAGAATCTGAATGTT
ACACTTCTAAAAATACGTACAATTATTCTTTCAGGTCAGCCCCAGGTAACAACAGAGGTT
GCCTTGGTGCTGTTAGGTTCTGCAACCATTCTCCTTGTCATTCCTTTTAACTATGTTCTT
GGTTTTGTTATCCTTGATCTTTTCACACGAGAGCTTGAGTTTCGTAGAGAAATGGCTATG
AGGTTCATCAGATTTTTGAAGGAGCGTTGGGATACTGTGCCTGCAGCGCCGGTTGCTGTA
ATACCGTTTGAGAGTGATGACTCTTGGTCAGTGGATCAAAGGAAAGAAATTAATAACAAA
AAATCAGAAAGAACTCAAAACAATATTAAGTCTAGATAATTTGTTACATGTACATTTTTC
AGGGTGGAGTTGTGTAACAAAATGGCCAGCACTTCCCAGTTAAAGAAAAAGCAAAATTTA
GCCAAACTTTTCCTGCTGATTATTTTTTAAAATGTATATAAATTGACATTTTCTTTATTA
TTTTCGTAAGCTAATAATTAGAAATTTTTGGTTCT