Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0034g01130.t01
CDS Infomation

cds chromosome:12X:12:17040115:17068302:1 gene:VIT_12s0034g01130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGGGGAGGGGAGGAAACCAAAGGCTGTGTTCATGGCCTTCGGCACCAAAGGCGAC
GTTCACCCTATTGCTGCCATTGCTTCAGCTTTTGCTAGTGACCAAAAACAGTACCATGTG
GTTCTAATAACTCATTCAGCACACAAGAACCTAACTGCTCATTTGGCAGGAAAAAATGTT
GCTTATTTTCCAATTTCATCTCCACCAGTTCTTTCTATCCATGAAAATCATGACACTGAA
GGTTCCCTGGAGTCTTTTTCTCTGCAGAAAAGAATAATTACAAGAGAACATAGACAAGAA
TGCTTTTCAGTGGTTGAAACGATCTTTGGGGAAGAACCAAGCATGGAGGGTGATTTTATT
GTGATAAATTTCTTTGCATTGGAAGGGTGGAGCCTTGCAGAACTTTTTCATGTGCGATGT
ATTGTTGCTGCTCCTTATGTTGTTCCTTATAGTGCTCCTTCATCATTTGAGCATCATTTC
AGAAAAGAGCTTCCCCTTTTGTATGAATATCTTCAAGAAGCTCCCACTGATAAGGTTTGT
TGGAAAGATGTAACCCACTGGATGTGGCCGCTTTTCACTGAAGATTGGGGATCATGGAGA
AGTGATGACTTGAATCTAAGCCCCTGGCCTTTCACAGATCCAGTAACAGGTCTTCCAATG
TGGCATGATAGGTATCCGTCTCCTGTGCTATTATATGGATTCAGCAAAGAAGTTGTTGAA
TGCCCTGGTTATTGGCCTTCAAATGTTCGGGTTTGTGGCTTTTGGTTTCTGCCTATGGAA
TGGGAGTTTTCATGTAACAAGTGTGGAGAAATTTCAGCTTCAATTTCCTTAAGGCGAGTA
AATGCGGAAGTTGAAATGTGCCCTGCACATACCATGTTGCAATCTTTTCTGAAGACCCCT
GCACCAATGCCACCTGTGTTCATAGGTCTGAGTTCTGTTGGAAGCATGGGTTTTTTGAGG
AACCCTCGAGAATTTCTTCAGGTTATCCTTACTGTTTTGGATATCACAAATTATAGATTT
ATCCTTTTCTCGGCTGGCTATGAACCATTGGATGCAGCAGTTAAAGTAATTGCTGCTGAA
GCATCATCAAGTTTGGAAAGGAGACAGTCCAGTGAAGATGGGATCTTTCTCTTTGGTGGC
AGACTTTTTTGCTTTTCTGGTACCATATCATACAACTGGTTGTTCCCAAGATGCAGTGCT
GCAATTCATCATGGTGGCAGTGGATCTACAGCTGCAGCACTAAAAGCGGGAATCCCACAG
GTATTATGTCCATTTATGCTGGATCAGTTCTATTGGGCTGAGAGGATGTTCTGGCTTGGA
GTTGCCCCAGAACCACTGAAAAGAAACCACTTGTTTCCAGACAAAAATGATGGCACAAGC
ATCAGGGAAGCTGCTGTTGTGTTATCAAGAGCCATAGATTATGCATTATCTCCTAAAGTG
AAAGCACGTGCATCAGAAATAGCTGAGAGAATTTCTCTTGAGGATGGAGTATCAGAAGCA
GTGAAGATCCTGAAGGAAGAGATTACTTGTAAAAATTCTACAAACTCCTATCTGGAAATG
ATAGTTTGCTTTCAAACTAACTTTACTAATTCAATATTAATCTTCAACCTGTAA

Peptide Sequence

PEP ID

VIT_12s0034g01130.t01
PEP Infomation

pep chromosome:12X:12:17040115:17068302:1 gene:VIT_12s0034g01130 transcript:VIT_12s0034g01130.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEGEGRKPKAVFMAFGTKGDVHPIAAIASAFASDQKQYHVVLITHSAHKNLTAHLAGKNV
AYFPISSPPVLSIHENHDTEGSLESFSLQKRIITREHRQECFSVVETIFGEEPSMEGDFI
VINFFALEGWSLAELFHVRCIVAAPYVVPYSAPSSFEHHFRKELPLLYEYLQEAPTDKVC
WKDVTHWMWPLFTEDWGSWRSDDLNLSPWPFTDPVTGLPMWHDRYPSPVLLYGFSKEVVE
CPGYWPSNVRVCGFWFLPMEWEFSCNKCGEISASISLRRVNAEVEMCPAHTMLQSFLKTP
APMPPVFIGLSSVGSMGFLRNPREFLQVILTVLDITNYRFILFSAGYEPLDAAVKVIAAE
ASSSLERRQSSEDGIFLFGGRLFCFSGTISYNWLFPRCSAAIHHGGSGSTAAALKAGIPQ
VLCPFMLDQFYWAERMFWLGVAPEPLKRNHLFPDKNDGTSIREAAVVLSRAIDYALSPKV
KARASEIAERISLEDGVSEAVKILKEEITCKNSTNSYLEMIVCFQTNFTNSILIFNL

Transcript Sequence

Transcript ID

VIT_12s0034g01130.t01
Transcript Infomation

cdna chromosome:12X:12:17040115:17068302:1 gene:VIT_12s0034g01130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCCATATTTATCATTCATACTCGACAGTGTAGAGAGGAAATGGGAAGAAGGCATGGAGG
GGGAGGGGAGGAAACCAAAGGCTGTGTTCATGGCCTTCGGCACCAAAGGCGACGTTCACC
CTATTGCTGCCATTGCTTCAGCTTTTGCTAGTGACCAAAAACAGTACCATGTGGTTCTAA
TAACTCATTCAGCACACAAGAACCTAACTGCTCATTTGGCAGGAAAAAATGTTGCTTATT
TTCCAATTTCATCTCCACCAGTTCTTTCTATCCATGAAAATCATGACACTGAAGGTTCCC
TGGAGTCTTTTTCTCTGCAGAAAAGAATAATTACAAGAGAACATAGACAAGAATGCTTTT
CAGTGGTTGAAACGATCTTTGGGGAAGAACCAAGCATGGAGGGTGATTTTATTGTGATAA
ATTTCTTTGCATTGGAAGGGTGGAGCCTTGCAGAACTTTTTCATGTGCGATGTATTGTTG
CTGCTCCTTATGTTGTTCCTTATAGTGCTCCTTCATCATTTGAGCATCATTTCAGAAAAG
AGCTTCCCCTTTTGTATGAATATCTTCAAGAAGCTCCCACTGATAAGGTTTGTTGGAAAG
ATGTAACCCACTGGATGTGGCCGCTTTTCACTGAAGATTGGGGATCATGGAGAAGTGATG
ACTTGAATCTAAGCCCCTGGCCTTTCACAGATCCAGTAACAGGTCTTCCAATGTGGCATG
ATAGGTATCCGTCTCCTGTGCTATTATATGGATTCAGCAAAGAAGTTGTTGAATGCCCTG
GTTATTGGCCTTCAAATGTTCGGGTTTGTGGCTTTTGGTTTCTGCCTATGGAATGGGAGT
TTTCATGTAACAAGTGTGGAGAAATTTCAGCTTCAATTTCCTTAAGGCGAGTAAATGCGG
AAGTTGAAATGTGCCCTGCACATACCATGTTGCAATCTTTTCTGAAGACCCCTGCACCAA
TGCCACCTGTGTTCATAGGTCTGAGTTCTGTTGGAAGCATGGGTTTTTTGAGGAACCCTC
GAGAATTTCTTCAGGTTATCCTTACTGTTTTGGATATCACAAATTATAGATTTATCCTTT
TCTCGGCTGGCTATGAACCATTGGATGCAGCAGTTAAAGTAATTGCTGCTGAAGCATCAT
CAAGTTTGGAAAGGAGACAGTCCAGTGAAGATGGGATCTTTCTCTTTGGTGGCAGACTTT
TTTGCTTTTCTGGTACCATATCATACAACTGGTTGTTCCCAAGATGCAGTGCTGCAATTC
ATCATGGTGGCAGTGGATCTACAGCTGCAGCACTAAAAGCGGGAATCCCACAGGTATTAT
GTCCATTTATGCTGGATCAGTTCTATTGGGCTGAGAGGATGTTCTGGCTTGGAGTTGCCC
CAGAACCACTGAAAAGAAACCACTTGTTTCCAGACAAAAATGATGGCACAAGCATCAGGG
AAGCTGCTGTTGTGTTATCAAGAGCCATAGATTATGCATTATCTCCTAAAGTGAAAGCAC
GTGCATCAGAAATAGCTGAGAGAATTTCTCTTGAGGATGGAGTATCAGAAGCAGTGAAGA
TCCTGAAGGAAGAGATTACTTGTAAAAATTCTACAAACTCCTATCTGGAAATGATAGTTT
GCTTTCAAACTAACTTTACTAATTCAATATTAATCTTCAACCTGTAA