Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0034g00950.t01
CDS Infomation

cds chromosome:12X:12:16762803:16770047:-1 gene:VIT_12s0034g00950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAGCCACTGGCCGCCGTCGTCCGAAGGACTCTATCCGCCCACCGCCACCACCAGCT
CCCTCCGTCGACCACCACCGCCAATTCAGCCGCGACTCTGACGCTAGTTTCGCCAGCAGC
CGCCCTTCCTCCCTTGGAATCAACCGCTCCTCCGCCGGCGATGCCCTCACCGACCGGTCC
TACCAACTCTCCGCCATCCGCACCATCAACTCCTTTCTCGCCTCCCATTCCTCTCCTCTC
TCCCTCAAACCCCCTCTCCCCTCCGCCAAAGACATTTCCGAAACCCTAAAATTCCTCATA
TCCCAACTCGATTTCCCCACAACCAAACTTGAAGACGATCTTCCTATCCTCCTCAAGCAC
CTCAATTGTCCGATCAAGCTCAACAAGTCCGCTCTCAAAGCCCCCGGAACCCCACATGCT
TGGCCTCCCCTTTTAGGCGTAATGCATTGGTTGGTTCAGATCGCATTGTATAATGACCAT
CTTGTGTCGAATTTGCAGTGTTTTGACAATACTTTTGTGTATGCATTGGATAGTTACTTG
CATTATATTCGCGGGGATGATGATGGGATGGAGGCGGTGGATAGGGAGTTTATGGGGAAG
TTGGAAAAGGAGAGGGACGCGGTGGCGGAAGGTGTGAAGGCATTGGAGAAAGAGGTGGCA
GAGAGGGAGGGGAGGTTGGAGGAATTGAGGTCGGGGCCTTCGGCAAAGGAGGTTGTGGAG
AAGGTGAGGGGGGTGTTGGAGGAGGATGTGAAGAAATTTCATGCAATAATTGCAGAATTT
TCAGGAAGGATTGCATCAGTGGAGAAGATTTTGGAGGAGAAGGAAAAGGAGTTGGGGGTG
AAGGTTGAGGAGAATAATAGAATTTGCGAGGAGAATGAAGAGCTGAAGAAGAGGGTTGAG
TTGCAGACGTTTAATGCAAGAGATGCAGAGAGGATGAAGAGGGAGTTGCAGGCAGTCGAG
AGAGATATCACGGAGGCTGAGGTTGCAAGGAATGGTTGGGAGGAGAAGTCTTGGGATCTT
GACACGACAATTGGGCACAAGTTTAAGGAGCTTGAAGCTCTTTCAATTGAATGCAACCAG
GCTCTCAGGAGGTTAAAGTTAGGAAATGGTTTGCAGTATGTGTTGAATGCCAAAGGGTCT
TCGCCTACTGAGGTTTTGGGAATTGATTACAAATCAGCGCTTAAGCCTGCACTTGACTCC
TTTGCTGATGACATAAATAAAAGCTCTATGTCAAAGTTGGAAGAGTTGATTTCTCTTCAG
CAACAATCAGTTGAAAATGCTGCTAAAATTGAAGCAAAAAGAAATCGTCTTGCTGCACTT
CAATCCCGTAGTGATGAAGTGGAAGCTCAATTAAATTTTTTGAAGAAGGAAACGCAAAAC
TACACCTCCAGATGTGCAATGGAAGCTAAGAAGTTGGTGGAGGATGTTGAGATAGAAACC
CATAATGTAGATATTGTGGAAAGAGAAGTGGCAGATGTTCTGGAGACGTCCAAATTGAAG
TTGCAGGAAGCAATCAAGCAAAATGAGGAAGAAATTCAGATATGTGCTTGGGAACTCTAT
GCTTTGGTTGATTCAGTTTCGAAATACAAAGAGCACATGGCATCAAAAATTTCAGAGATG
AAGAGCAACCTTTCAGAAACAGCAGGAGCTGTATCAGATTCTTACAAAGGCTCCTTGTCA
GCACAGTTTGGTATCACTTTGGATACAAGCCACTGA

Peptide Sequence

PEP ID

VIT_12s0034g00950.t01
PEP Infomation

pep chromosome:12X:12:16762803:16770047:-1 gene:VIT_12s0034g00950 transcript:VIT_12s0034g00950.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKATGRRRPKDSIRPPPPPAPSVDHHRQFSRDSDASFASSRPSSLGINRSSAGDALTDRS
YQLSAIRTINSFLASHSSPLSLKPPLPSAKDISETLKFLISQLDFPTTKLEDDLPILLKH
LNCPIKLNKSALKAPGTPHAWPPLLGVMHWLVQIALYNDHLVSNLQCFDNTFVYALDSYL
HYIRGDDDGMEAVDREFMGKLEKERDAVAEGVKALEKEVAEREGRLEELRSGPSAKEVVE
KVRGVLEEDVKKFHAIIAEFSGRIASVEKILEEKEKELGVKVEENNRICEENEELKKRVE
LQTFNARDAERMKRELQAVERDITEAEVARNGWEEKSWDLDTTIGHKFKELEALSIECNQ
ALRRLKLGNGLQYVLNAKGSSPTEVLGIDYKSALKPALDSFADDINKSSMSKLEELISLQ
QQSVENAAKIEAKRNRLAALQSRSDEVEAQLNFLKKETQNYTSRCAMEAKKLVEDVEIET
HNVDIVEREVADVLETSKLKLQEAIKQNEEEIQICAWELYALVDSVSKYKEHMASKISEM
KSNLSETAGAVSDSYKGSLSAQFGITLDTSH

Transcript Sequence

Transcript ID

VIT_12s0034g00950.t01
Transcript Infomation

cdna chromosome:12X:12:16762803:16770047:-1 gene:VIT_12s0034g00950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCGGAGATGAAAGCCACTGGCCGCCGTCGTCCGAAGGACTCTATCCGCCCACCGCCACCA
CCAGCTCCCTCCGTCGACCACCACCGCCAATTCAGCCGCGACTCTGACGCTAGTTTCGCC
AGCAGCCGCCCTTCCTCCCTTGGAATCAACCGCTCCTCCGCCGGCGATGCCCTCACCGAC
CGGTCCTACCAACTCTCCGCCATCCGCACCATCAACTCCTTTCTCGCCTCCCATTCCTCT
CCTCTCTCCCTCAAACCCCCTCTCCCCTCCGCCAAAGACATTTCCGAAACCCTAAAATTC
CTCATATCCCAACTCGATTTCCCCACAACCAAACTTGAAGACGATCTTCCTATCCTCCTC
AAGCACCTCAATTGTCCGATCAAGCTCAACAAGTCCGCTCTCAAAGCCCCCGGAACCCCA
CATGCTTGGCCTCCCCTTTTAGGCGTAATGCATTGGTTGGTTCAGATCGCATTGTATAAT
GACCATCTTGTGTCGAATTTGCAGTGTTTTGACAATACTTTTGTGTATGCATTGGATAGT
TACTTGCATTATATTCGCGGGGATGATGATGGGATGGAGGCGGTGGATAGGGAGTTTATG
GGGAAGTTGGAAAAGGAGAGGGACGCGGTGGCGGAAGGTGTGAAGGCATTGGAGAAAGAG
GTGGCAGAGAGGGAGGGGAGGTTGGAGGAATTGAGGTCGGGGCCTTCGGCAAAGGAGGTT
GTGGAGAAGGTGAGGGGGGTGTTGGAGGAGGATGTGAAGAAATTTCATGCAATAATTGCA
GAATTTTCAGGAAGGATTGCATCAGTGGAGAAGATTTTGGAGGAGAAGGAAAAGGAGTTG
GGGGTGAAGGTTGAGGAGAATAATAGAATTTGCGAGGAGAATGAAGAGCTGAAGAAGAGG
GTTGAGTTGCAGACGTTTAATGCAAGAGATGCAGAGAGGATGAAGAGGGAGTTGCAGGCA
GTCGAGAGAGATATCACGGAGGCTGAGGTTGCAAGGAATGGTTGGGAGGAGAAGTCTTGG
GATCTTGACACGACAATTGGGCACAAGTTTAAGGAGCTTGAAGCTCTTTCAATTGAATGC
AACCAGGCTCTCAGGAGGTTAAAGTTAGGAAATGGTTTGCAGTATGTGTTGAATGCCAAA
GGGTCTTCGCCTACTGAGGTTTTGGGAATTGATTACAAATCAGCGCTTAAGCCTGCACTT
GACTCCTTTGCTGATGACATAAATAAAAGCTCTATGTCAAAGTTGGAAGAGTTGATTTCT
CTTCAGCAACAATCAGTTGAAAATGCTGCTAAAATTGAAGCAAAAAGAAATCGTCTTGCT
GCACTTCAATCCCGTAGTGATGAAGTGGAAGCTCAATTAAATTTTTTGAAGAAGGAAACG
CAAAACTACACCTCCAGATGTGCAATGGAAGCTAAGAAGTTGGTGGAGGATGTTGAGATA
GAAACCCATAATGTAGATATTGTGGAAAGAGAAGTGGCAGATGTTCTGGAGACGTCCAAA
TTGAAGTTGCAGGAAGCAATCAAGCAAAATGAGGAAGAAATTCAGATATGTGCTTGGGAA
CTCTATGCTTTGGTTGATTCAGTTTCGAAATACAAAGAGCACATGGCATCAAAAATTTCA
GAGATGAAGAGCAACCTTTCAGAAACAGCAGGAGCTGTATCAGATTCTTACAAAGGCTCC
TTGTCAGCACAGTTTGGTATCACTTTGGATACAAGCCACTGACCCAATAGATTATTCCTT
TCTGCGACACAAGTTCTTTTTCTTTTTCCTTTTCTTTTAGGGTAATGGACTGATTTGTAT
TGTATGTATACTTGTCTTAAATATTTGGTACTAGCAACTTGCCCTATGGTAACAATGTGG
CTTGGGTTGAGAATGGTATAAAGATGAGCCTAGGATTGACAATGGAGCATGGGA