Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g03810.t01
CDS Infomation

cds chromosome:12X:12:4676325:4683757:-1 gene:VIT_12s0028g03810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTTTCTACAGCTAGGGTCTTCGCCTGCAACTTCAAACCCTCTCAATCTCCGCCATTA
CGCAGCAAAACCCAGATGGAGGCACGAACCAGAAGCCCACAAAGCACCTTCTCGAGATCT
GGCTCTCTTTCCCCTCCAAGGGAAAGGCTCAGAGAAGATAATGGTGGTGGAACTGCCATT
GCGTTGCAGGAATGGCAGGGTTGGGGAACAGAGTCTCCGTTACCTGAAAGGGTTGCTGAG
ATTGTTCATGAATTGAAGTATTTGGAGAAAGACTTCAATGCCCAGATGAGTTTTGGTGGG
GTTGGTGGTAAACTGCAGGGAGATTTCAAGATTCAAGAGGATAAAAAGCACAGAGCAACT
TATCAGGCTTTAGGTGATTCTGAGAAAAAGCTCCAATTCTTTTCAGCTCGACAAATAGCA
TGCCGCTTGCTTGGAAGTAGGGGTTACCTTTGTCAGAAGTGCTGGCTTGCTCTGGAAGAT
TGTATGTGTTCTAAAGTGATTCCTTGCGTTCTATGGCATGGCATACGGTTCTGGTTGTAT
ATGCATCCAAAGGATTTTCTACGGCAGAACAATACTGGAAAGTTGCTGTGGCAAGTGTTT
GGTGTTAAAGCTGCAACTTTGTGCCTCTTTGGCATTGCTGAACATGAAGAGATCATGTGG
AATACATTTGCACTTGCAGGGAAAAGCAATGTTTGGTGCCTTTATCCGAATAAGAATGCG
CCAACAAAATCAGTTCAGGATATCTTTGCTCAAGAATCTTTGGGAGGTCTAGAATGCTCA
TCGACAACGACAAACAGAGAAAAAATTCTGAACTTTATTTTAATTGATGGCACATGGAAC
AACTCCGCAGCAATGTTCAGGCGTTTGAAGGAACAAGCAAAGTTAGCTTGGGGAGAGGAG
GACCTTCCTTGCATATCTCTGGCCATGGGTGCCTCTGCAATGCATAAGCTTCGGCCCCAA
CCATCTTGGGATCGTACCTGTACAGCAGCAGCAGCCATTGGCCTCCTCTCTGAGCTCCAA
CTTATTCCAGAGTTTGGCTCATATGGATTGGATAAGCAAGCAGAAGCAGTGGAAGATGCC
TTAGCAGTTCTATTAGAAGCTCTCACAGCTCGACGCCTTCGCATGGGCAGGTCCATCTCT
CGTAAGCAGAGACACAACACTGACATCTGTTAA

Peptide Sequence

PEP ID

VIT_12s0028g03810.t01
PEP Infomation

pep chromosome:12X:12:4676325:4683757:-1 gene:VIT_12s0028g03810 transcript:VIT_12s0028g03810.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLSTARVFACNFKPSQSPPLRSKTQMEARTRSPQSTFSRSGSLSPPRERLREDNGGGTAI
ALQEWQGWGTESPLPERVAEIVHELKYLEKDFNAQMSFGGVGGKLQGDFKIQEDKKHRAT
YQALGDSEKKLQFFSARQIACRLLGSRGYLCQKCWLALEDCMCSKVIPCVLWHGIRFWLY
MHPKDFLRQNNTGKLLWQVFGVKAATLCLFGIAEHEEIMWNTFALAGKSNVWCLYPNKNA
PTKSVQDIFAQESLGGLECSSTTTNREKILNFILIDGTWNNSAAMFRRLKEQAKLAWGEE
DLPCISLAMGASAMHKLRPQPSWDRTCTAAAAIGLLSELQLIPEFGSYGLDKQAEAVEDA
LAVLLEALTARRLRMGRSISRKQRHNTDIC

Transcript Sequence

Transcript ID

VIT_12s0028g03810.t01
Transcript Infomation

cdna chromosome:12X:12:4676325:4683757:-1 gene:VIT_12s0028g03810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTCAACGACAAAACCACCATGCTTTCTACAGCTAGGGTCTTCGCCTGCAACTTCAAACC
CTCTCAATCTCCGCCATTACGCAGCAAAACCCAGATGGAGGCACGAACCAGAAGCCCACA
AAGCACCTTCTCGAGATCTGGCTCTCTTTCCCCTCCAAGGGAAAGGCTCAGAGAAGATAA
TGGTGGTGGAACTGCCATTGCGTTGCAGGAATGGCAGGGTTGGGGAACAGAGTCTCCGTT
ACCTGAAAGGGTTGCTGAGATTGTTCATGAATTGAAGTATTTGGAGAAAGACTTCAATGC
CCAGATGAGTTTTGGTGGGGTTGGTGGTAAACTGCAGGGAGATTTCAAGATTCAAGAGGA
TAAAAAGCACAGAGCAACTTATCAGGCTTTAGGTGATTCTGAGAAAAAGCTCCAATTCTT
TTCAGCTCGACAAATAGCATGCCGCTTGCTTGGAAGTAGGGGTTACCTTTGTCAGAAGTG
CTGGCTTGCTCTGGAAGATTGTATGTGTTCTAAAGTGATTCCTTGCGTTCTATGGCATGG
CATACGGTTCTGGTTGTATATGCATCCAAAGGATTTTCTACGGCAGAACAATACTGGAAA
GTTGCTGTGGCAAGTGTTTGGTGTTAAAGCTGCAACTTTGTGCCTCTTTGGCATTGCTGA
ACATGAAGAGATCATGTGGAATACATTTGCACTTGCAGGGAAAAGCAATGTTTGGTGCCT
TTATCCGAATAAGAATGCGCCAACAAAATCAGTTCAGGATATCTTTGCTCAAGAATCTTT
GGGAGGTCTAGAATGCTCATCGACAACGACAAACAGAGAAAAAATTCTGAACTTTATTTT
AATTGATGGCACATGGAACAACTCCGCAGCAATGTTCAGGCGTTTGAAGGAACAAGCAAA
GTTAGCTTGGGGAGAGGAGGACCTTCCTTGCATATCTCTGGCCATGGGTGCCTCTGCAAT
GCATAAGCTTCGGCCCCAACCATCTTGGGATCGTACCTGTACAGCAGCAGCAGCCATTGG
CCTCCTCTCTGAGCTCCAACTTATTCCAGAGTTTGGCTCATATGGATTGGATAAGCAAGC
AGAAGCAGTGGAAGATGCCTTAGCAGTTCTATTAGAAGCTCTCACAGCTCGACGCCTTCG
CATGGGCAGGTCCATCTCTCGTAAGCAGAGACACAACACTGACATCTGTTAACAACTAAC
CAAGAATCACATTGTCAGCAGCAGGAGGATGCATTTTTTAGGTCTCCCTTTGGTTTGCAT
GGTAACCAAGTCAAGGACCAAGTTATGAGGATGACATCGCAGACTAGCAACACATCATTG
TATGCTTCAGATATGGTAGGCCCCTCTTTTTTCTTAGAGGGTTTTTGGTAGAATTTAATG
TTTAATGACTTAAAGTGACTTTAAGTTACTGTGCTTAAATCATTGAGTCATATTAAGTCA
TTAAGCTGATTTACCAAAATCATTTTTAAGTTATTAAGTCACATTAAGTCAATAGGTTGA
TTTATCAAAAACCCCTCTAGTCTCAAACTTTTTAGTTTTGCTTACTGATTGATGTGGTAT
TGGATCAAAACAGTCGTCACAGTTGACTGTTCCATTGAACTCATGTTGGTTGTATCGATA
CACTACATACATTGAGAATCCTTCTTTGCAGACAGAATGAAATGATCTTGAACTTA