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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g03760.t01
CDS Infomation

cds chromosome:12X:12:4637715:4638689:-1 gene:VIT_12s0028g03760 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 1C2 [Source:UniProtKB/Swiss-Prot;Acc:A7PJ32]
Sequence

ATGGCAAAGAATACGGACAGGATCTGCTTCCTTGTTCTAAGGCTTCTGGCTTTTGGAGCC
ACCCTTTCGGCTGCCATTGTCATGGCTACTAGTCATGAGAGGACTACCTACCTCTCCTTG
TCGATTGAAGCGAAGTACAGCCATACCCCTGCCTTCAAGTATTTCGTGATTGCCAATGCC
ATAGGAAGCGCCTACAGCCTTCTCCTCCTGTTTCTTCCTTCCCACGGTTCGCTATGGCCA
TTAGTCATCGCCTCCGATGTGGTGATCACCATGTTTCTCACTTCAAGCATATCAGCAGCA
TTGTCAATTGCCTATGTGGGAAAGAAAGGGAATTCATATGCAGGATGGCTACCCATCTGT
GACCAAGTACCCAACTACTGCAACCATGTAACTGGAGCTCTAGCAGCTGGCTTCATTGGG
GTCGTACTTTATATGGTGCTTCTACAGTACTCCATCTATACAAAATGTTGTAAATCCTCT
TCTTAG

Peptide Sequence

PEP ID

VIT_12s0028g03760.t01
PEP Infomation

pep chromosome:12X:12:4637715:4638689:-1 gene:VIT_12s0028g03760 transcript:VIT_12s0028g03760.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 1C2 [Source:UniProtKB/Swiss-Prot;Acc:A7PJ32]
Sequence

MAKNTDRICFLVLRLLAFGATLSAAIVMATSHERTTYLSLSIEAKYSHTPAFKYFVIANA
IGSAYSLLLLFLPSHGSLWPLVIASDVVITMFLTSSISAALSIAYVGKKGNSYAGWLPIC
DQVPNYCNHVTGALAAGFIGVVLYMVLLQYSIYTKCCKSSS

Transcript Sequence

Transcript ID

VIT_12s0028g03760.t01
Transcript Infomation

cdna chromosome:12X:12:4637715:4638689:-1 gene:VIT_12s0028g03760 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 1C2 [Source:UniProtKB/Swiss-Prot;Acc:A7PJ32]
Sequence

CCAACTCTTGTCATGATGGCAAAGAATACGGACAGGATCTGCTTCCTTGTTCTAAGGCTT
CTGGCTTTTGGAGCCACCCTTTCGGCTGCCATTGTCATGGCTACTAGTCATGAGAGGACT
ACCTACCTCTCCTTGTCGATTGAAGCGAAGTACAGCCATACCCCTGCCTTCAAGTATTTC
GTGATTGCCAATGCCATAGGAAGCGCCTACAGCCTTCTCCTCCTGTTTCTTCCTTCCCAC
GGTTCGCTATGGCCATTAGTCATCGCCTCCGATGTGGTGATCACCATGTTTCTCACTTCA
AGCATATCAGCAGCATTGTCAATTGCCTATGTGGGAAAGAAAGGGAATTCATATGCAGGA
TGGCTACCCATCTGTGACCAAGTACCCAACTACTGCAACCATGTAACTGGAGCTCTAGCA
GCTGGCTTCATTGGGGTCGTACTTTATATGGTGCTTCTACAGTACTCCATCTATACAAAA
TGTTGTAAATCCTCTTCTTAGGCAAGATGCTTAGTATGCTTAATTAGTTTCCCCAATTCT
AGGGACTCTGTATCTCAGTTCTTCTTTTCTGATCCAGTTAAGTTGGAACAGTCTTTAAAA
ATTTTCAGCTCAGTTATTATTATGGAGGAGGATTTTCAA